prot_C-linearis_contig107.1015.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig107.1015.1
Unique Nameprot_C-linearis_contig107.1015.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length157
Homology
BLAST of mRNA_C-linearis_contig107.1015.1 vs. uniprot
Match: D7FN01_ECTSI (Hpt domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN01_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 1.170e-74
Identity = 112/144 (77.78%), Postives = 130/144 (90.28%), Query Frame = 0
Query:   13 SSSESELANLVGVPLGVPDGTEVIDWTAAVDQCSGDVSFLEELLVDLWNESNSHLQQLKDFVPRGAMLDTQHEAHSIKGAAANLMCHRLRLSALYLERAGQVGTRLKEGSGGFKSVKGDLEKGMEVLEKELALFKGMLQQKRLI 156
            SS +   ANLVGV LGVPD TEVIDW AAVDQCSGDVSFLEELLVDLWNESN+H++QL++F+PRGAM DTQHEAHSIKGAAANLMCHRLRLSALYLERAGQVGTRL+EGS  F SVK DL+KG +VLE+EL+LF+ +L++K+L+
Sbjct:   15 SSDQGSSANLVGVQLGVPDDTEVIDWAAAVDQCSGDVSFLEELLVDLWNESNAHMEQLREFIPRGAMRDTQHEAHSIKGAAANLMCHRLRLSALYLERAGQVGTRLQEGSSDFNSVKEDLKKGQQVLERELSLFQDLLKKKKLV 158          
BLAST of mRNA_C-linearis_contig107.1015.1 vs. uniprot
Match: A0A835Z3I2_9STRA (Hpt domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.250e-23
Identity = 54/127 (42.52%), Postives = 79/127 (62.20%), Query Frame = 0
Query:   30 PDGTEVIDWTAAVDQCSGDVSFLEELLVDLWNESNSHLQQLKDFVPRGAMLDTQHEAHSIKGAAANLMCHRLRLSALYLERAGQVGTRLKEGSGGFKSVKGDLEKGMEVLEKELALFKGMLQQKRLI 156
            P    V+DWT A++QC GD  FL+ELLVDLW ES+SHL++L+  VP   + +T++ AH++KGAA NLMC  L  + L LE+    GT        F+++K  L     V++ E+A F+  L ++ LI
Sbjct:   16 PQPLVVVDWTMALEQCGGDEEFLKELLVDLWTESSSHLEELQSTVPARNITETRNIAHTMKGAAGNLMCFALHHACLTLEKTAHEGTSTIPTEQLFEAMKDALV----VIQGEMARFEEYLHKRALI 138          
BLAST of mRNA_C-linearis_contig107.1015.1 vs. uniprot
Match: A0A7S2XTL1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTL1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.400e-23
Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 0
Query:   35 VIDWTAAVDQCSGDVSFLEELLVDLWNESNSHLQQLKDFVPRGAMLDTQHEAHSIKGAAANLMCHRLRLSALYLERAGQVGTRLKEGSGGFKSVKGDLEKGMEVLEKELALFKGMLQQKRLI 156
            VI+W  A++Q   D  FL ELL DL+NE+ +H++ LK  VP       + +AHSIKGAAANLMCHRLR +AL+LE+AG  GT+   G     ++   L+KG+E L  E   F  +L++K LI
Sbjct:  100 VINWAEAMEQVGDDEEFLHELLGDLFNETQAHVESLKASVPSRDTETVRQKAHSIKGAAANLMCHRLREAALFLEKAGMSGTK---GELTGDALNQTLDKGLEALLTEFDSFGKVLKEKELI 218          
BLAST of mRNA_C-linearis_contig107.1015.1 vs. uniprot
Match: A0A6S9GU07_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GU07_HETAK)

HSP 1 Score: 75.9 bits (185), Expect = 1.250e-14
Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = 0
Query:   31 DGTEVIDWTAAVDQCSGDVSFLEELLVDLWNESNSHLQQLKDFVPRGAMLDT--------QHEAHSIKGAAANLMCHRLRLSALYLERAGQVGTRLKEGSGGFKSVKGD----LEKGMEVLEKELA 144
            D  E+I W AA++QC+GD  FL+ELL D   E+ +H Q L+  V      DT        +  AHSIKGAAANLMC++LR +A  LE+ G  G   +     F  +  +    LE  ++ L++ELA
Sbjct:    9 DDDEIIGWEAALEQCAGDEEFLQELLQDFSVETAAHFQALQKAVDALTPEDTAGDEADAIRRAAHSIKGAAANLMCNKLRDAAQSLEKTGMQGVSGEIEGDSFIELATEGLATLESEVKALDEELA 134          
BLAST of mRNA_C-linearis_contig107.1015.1 vs. uniprot
Match: A0A7S2DUJ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUJ5_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 5.560e-6
Identity = 34/88 (38.64%), Postives = 43/88 (48.86%), Query Frame = 0
Query:   36 IDWTAAVDQCSGDVSFLEELLVDLWNESNSHLQQLKDFVPRGAMLDTQ-------------HEAHSIKGAAANLMCHRLRLSALYLER 110
            I+W  A  QC GD  FL ELL D           + + +  G MLD +              +AH+IKGAAANLMCH LR  +  LE+
Sbjct:   11 INWDEAKGQCDGDTEFLNELLNDF----------MVELLTAGEMLDRKIKSKEGNWKTVASQQAHAIKGAAANLMCHELRSVSETLEK 88          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FN01_ECTSI1.170e-7477.78Hpt domain protein n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835Z3I2_9STRA1.250e-2342.52Hpt domain protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2XTL1_9STRA3.400e-2346.72Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9GU07_HETAK1.250e-1439.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DUJ5_9STRA5.560e-638.64Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..156
IPR008207Signal transduction histidine kinase, phosphotransfer (Hpt) domainPFAMPF01627Hptcoord: 54..113
e-value: 5.1E-7
score: 29.9
IPR036641HPT domain superfamilyGENE3D1.20.120.160coord: 32..152
e-value: 5.0E-13
score: 51.4
IPR036641HPT domain superfamilySUPERFAMILY47226Histidine-containing phosphotransfer domain, HPT domaincoord: 33..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig107contigC-linearis_contig107:35481..37693 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig107.1015.1mRNA_C-linearis_contig107.1015.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig107 33546..39424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig107.1015.1 ID=prot_C-linearis_contig107.1015.1|Name=mRNA_C-linearis_contig107.1015.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=157bp
MSEKLETTPAAASSSESELANLVGVPLGVPDGTEVIDWTAAVDQCSGDVS
FLEELLVDLWNESNSHLQQLKDFVPRGAMLDTQHEAHSIKGAAANLMCHR
LRLSALYLERAGQVGTRLKEGSGGFKSVKGDLEKGMEVLEKELALFKGML
QQKRLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008207Sig_transdc_His_kin_Hpt_dom
IPR036641HPT_dom_sf