prot_C-linearis_contig106.999.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.999.1
Unique Nameprot_C-linearis_contig106.999.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length803
Homology
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BLAST of mRNA_C-linearis_contig106.999.1 vs. uniprot
Match: A0A6H5JFL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL3_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 3.550e-30
Identity = 77/119 (64.71%), Postives = 95/119 (79.83%), Query Frame = 0 
Query:  528 KSQGDLATRLRKRIQDSSTLQRAKAVHSRITESDPIDKMGTMLDLKKDKLGDFSVKDPAGKIIKEPHVPMLIEELNGGEKPMSWWGVMTCPDLLPPGSGSRPXXXXXXIV---SPRHPP 643
            K Q DL  RL+K+I++SS L++A+A H+ IT+SDPIDKMGTMLD K+++L DF+VKD  G++I+EP+VPMLIEEL G EKPMSWWGVMTCPDL PP      XXXXXX +   SPRHPP
Sbjct: 1563 KRQDDLENRLKKKIRESSALEKARADHASITDSDPIDKMGTMLDSKRNRLDDFAVKDSEGRVIREPNVPMLIEELKGEEKPMSWWGVMTCPDLPPPXXXXXXXXXXXXXLVSMSPRHPP 1681
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFL3_9PHAE3.550e-3064.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:389043..393098 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.999.1mRNA_C-linearis_contig106.999.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 389031..394176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.999.1 ID=prot_C-linearis_contig106.999.1|Name=mRNA_C-linearis_contig106.999.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=803bp
MEDDWEQDDKGEGRRTASKVGKAGKKRRRAEAEQHRSRSRSDSGSNWSAG
SGNDYHGASGGGVNRRPTRQRKQASSSSSRPRRNDRRSRSRSRSNSSDGG
GGRNDGRRRPSSWSRSKSRSRGRRTRRSRSRSRSRSRSRSRAGGRRRRLS
SSSSLSDSEPGGRSNGGTRGGSGGRAMSPERPRGGGRGRYDDGRDSRGRS
ASSGEEGGGGRSRDRSFRKSDGSGSKRRSGSPGRRPRDVAGKGKEDAQGV
KREGAGGKATALPNRKKLSRDDASAIPRKKDPLPPQSRSGSSNPSNNGSA
PAPASASRRRSRSRSRSRDGRSRSRSRSYSFSSRSRSRSRSDSRSRNGSR
RRRSGSRPRSSSSRKGGGDGQGQGRHRRRDSRGGSPRSPRSDGGSRNRKN
SNRSRSRSRSRDRERERERDRDRDRDRRKGAGGNGGRGGDASGERHQQQQ
QQQQQQQQQQRGRVGGGEERRGSSGGRGVGAAEAERLAADRDRAALQEAA
ARAMARTAAKAKEAEGAAAEAAEAAEQKSQGDLATRLRKRIQDSSTLQRA
KAVHSRITESDPIDKMGTMLDLKKDKLGDFSVKDPAGKIIKEPHVPMLIE
ELNGGEKPMSWWGVMTCPDLLPPGSGSRPPPPPPPIVSPRHPPAQQHQLH
RHAPPNLYQQVPQQHPGISAVAWSTSSWSGDSSMPNTARPANGVGGDGGG
GGAYGGANNNPAAAVNKYSFDPYGNRPPQQGPQQHQQQQHQHYHQQRPPL
PHGVSMLPRPGHPPLPHSNLPPQRPGPTGGFGGGYPGGNAAGGAASNPPL
GA*
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