prot_C-linearis_contig106.980.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.980.1
Unique Nameprot_C-linearis_contig106.980.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length631
Homology
[Close]
BLAST of mRNA_C-linearis_contig106.980.1 vs. uniprot
Match: D8LCI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI9_ECTSI)

HSP 1 Score: 822 bits (2124), Expect = 4.170e-294
Identity = 461/627 (73.52%), Postives = 520/627 (82.93%), Query Frame = 0 
Query:    1 MRLQQKTALQKVGVLVRAGMMEPPKWYAAAKQVPPFQRRPSNGIQALKLPWDTLADDFVNRNPHMVEDPEWLGPRGFQPGAPPISHVFAKRQYALMQNGVKKEEAYNLTHEALGKERAADVAAVQRMVKKASSMSGARPSFVSDNDVYSGLRFWQSMMQETPYEDWDLPAKQGLDVFLRRELIGWSDDQVKLAQSARDGTVTALEAETNRLRVTLFPETKTAEYAFPSDVVHPRNFDDAADGDSDASDISAEF-GDADEGEDISSDDAGATEEGRVVREGSEEWKAARLNCGWEATLRRFEEMTEEAGYELDWSAEDRRKLDNFIVGRCIRRSVLDEAFTWLPDPIADALAKVNASITAPGAAPPXXXXXXXXXXXXKAEEQDNGADDDGSERWVPGPELEAFKGNWMTLARKRTGRTAGGVSAAXXXXXXXXXXXGHGGMARDLTPAANRPTLALQSNLNAVLTQAKRQLLPDLVLEVDEKAGPVSVEERKAKDAAKRKIVMSALEWEQEEMDEQRTAVTRKLRAGMTIEQMDPIAAVRKQRLKKGTWKAERRRLLALEKKMYSDQQAGLDHDDTPEHDAPELIDDVLESEVVRRRADEFYAKEKDRIKREAKLQAAAAATAKAAK 626
            MRLQQKTALQKV VLV+AGMMEPPKWYAAAKQVPPFQRRPSNGI+ALKLPWDTLA++F +RNPHMVEDPEWLGPRGF+PGAPPISHVFAKRQYALMQNG+ KE+AY  TH  +  ER+ADVAAVQ+MV++ASSM+G RPSFVSD+DVYSGL+FWQSMMQET Y +WDL AK GLD FLRRELIGW DD++KLAQSARDGT  ALEAE NRLRVTLFPETKTAEYA+PSDVV PR+         DA++   E  GD ++ E +  ++A       + R+G+EEW +ARLNC W AT RRFEEMTEE GYELDWS EDRR LDNFIVGRCIRRS+LDEAFTWLPDP+A+ALAKVNASI A   +PPXXXXXXXX       E     DD   ERWV GPELEAF G+WM+LARKRTGRT  GV AAXXXXXXXXXXX   G+ARD+     RP++ALQSNL AVLTQAKRQLLPDLVLEVDEKAGPVS EER+ KDAA++KIVMSALEWE+EE+DEQR AVT KLRAGMT+EQ DPI AVRK+RL KGTWKAERRRLL LEKK+Y ++QAGL+HD+ P    PEL+DDV+ESE +RR+ADEFYAKEK RIK+E KLQA AAA A AAK
Sbjct:    1 MRLQQKTALQKVSVLVKAGMMEPPKWYAAAKQVPPFQRRPSNGIEALKLPWDTLANEFASRNPHMVEDPEWLGPRGFRPGAPPISHVFAKRQYALMQNGLMKEDAYERTHALMKMERSADVAAVQKMVREASSMAGGRPSFVSDDDVYSGLKFWQSMMQETSYSEWDLAAKLGLDAFLRRELIGWDDDRLKLAQSARDGTSAALEAEINRLRVTLFPETKTAEYAYPSDVVRPRD---------DANEDEEELDGDVEDEEGVEGEEA-------LARDGTEEWISARLNCSWSATQRRFEEMTEEVGYELDWSVEDRRSLDNFIVGRCIRRSILDEAFTWLPDPVAEALAKVNASILA---SPPXXXXXXXXEAATAEGEGTGDEDDKDGERWVSGPELEAFTGDWMSLARKRTGRTTTGV-AAXXXXXXXXXXXXRRGVARDVEAVVGRPSMALQSNLRAVLTQAKRQLLPDLVLEVDEKAGPVSAEERRVKDAARQKIVMSALEWEKEEIDEQRKAVTDKLRAGMTVEQADPIEAVRKKRLAKGTWKAERRRLLNLEKKLYYEKQAGLEHDEGPATAIPELVDDVVESESIRRKADEFYAKEKARIKKEIKLQAEAAAIAAAAK 607
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCI9_ECTSI4.170e-29473.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:233526..241609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.980.1mRNA_C-linearis_contig106.980.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 233508..242350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.980.1 ID=prot_C-linearis_contig106.980.1|Name=mRNA_C-linearis_contig106.980.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=631bp
MRLQQKTALQKVGVLVRAGMMEPPKWYAAAKQVPPFQRRPSNGIQALKLP
WDTLADDFVNRNPHMVEDPEWLGPRGFQPGAPPISHVFAKRQYALMQNGV
KKEEAYNLTHEALGKERAADVAAVQRMVKKASSMSGARPSFVSDNDVYSG
LRFWQSMMQETPYEDWDLPAKQGLDVFLRRELIGWSDDQVKLAQSARDGT
VTALEAETNRLRVTLFPETKTAEYAFPSDVVHPRNFDDAADGDSDASDIS
AEFGDADEGEDISSDDAGATEEGRVVREGSEEWKAARLNCGWEATLRRFE
EMTEEAGYELDWSAEDRRKLDNFIVGRCIRRSVLDEAFTWLPDPIADALA
KVNASITAPGAAPPASGGATAAAGDAKAEEQDNGADDDGSERWVPGPELE
AFKGNWMTLARKRTGRTAGGVSAAAAAAKAKAKGGGHGGMARDLTPAANR
PTLALQSNLNAVLTQAKRQLLPDLVLEVDEKAGPVSVEERKAKDAAKRKI
VMSALEWEQEEMDEQRTAVTRKLRAGMTIEQMDPIAAVRKQRLKKGTWKA
ERRRLLALEKKMYSDQQAGLDHDDTPEHDAPELIDDVLESEVVRRRADEF
YAKEKDRIKREAKLQAAAAATAKAAKEAKA*
back to top