prot_C-linearis_contig106.1004.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.1004.1
Unique Nameprot_C-linearis_contig106.1004.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length109
Homology
BLAST of mRNA_C-linearis_contig106.1004.1 vs. uniprot
Match: A0A6H5KLZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLZ5_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 7.610e-13
Identity = 44/85 (51.76%), Postives = 52/85 (61.18%), Query Frame = 0
Query:   17 PRPQTAEEKHRAEGVGMVENDPVLKEEINQKLGVSDEGRVDAVHAENTRAMATSLAALELNCKSNIGRVAYNNRIGGCSWGRGAH 101
            PR  T  EK RA+ + MV  DPV +EE+   LGV     V AVHAENTR MA SLAAL+   +SNIGRVAY   +   + G G H
Sbjct:   71 PRKPTRVEKRRADVLEMVRKDPVSEEEMRTMLGVQGLEGVAAVHAENTRTMAASLAALKGKSQSNIGRVAYTTVLAAVA-GAGEH 154          
BLAST of mRNA_C-linearis_contig106.1004.1 vs. uniprot
Match: A0A6H5K614_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K614_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 2.730e-12
Identity = 42/78 (53.85%), Postives = 50/78 (64.10%), Query Frame = 0
Query:   24 EKHRAEGVGMVENDPVLKEEINQKLGVSDEGRVDAVHAENTRAMATSLAALELNCKSNIGRVAYNNRIGGCSWGRGAH 101
            EK RA+ + MV  DPVL+EE+   LGV     V A HAENTRAMA SLAAL+   +SNIGRVAY   +   + G G H
Sbjct:   22 EKRRADVLEMVRKDPVLEEEMRTVLGVQGLEGVAAAHAENTRAMAASLAALKGKSQSNIGRVAYTTVLAAVA-GAGEH 98          
BLAST of mRNA_C-linearis_contig106.1004.1 vs. uniprot
Match: A0A6H5J5R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5R2_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.740e-11
Identity = 38/69 (55.07%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   33 MVENDPVLKEEINQKLGVSDEGRVDAVHAENTRAMATSLAALELNCKSNIGRVAYNNRIGGCSWGRGAH 101
            MV  DPVL+EE+   LGV     V A HAENTRAMA SLAAL+   +SNIGRVAY   +   + G G H
Sbjct:    1 MVRKDPVLEEEMRTMLGVQGLEGVAAAHAENTRAMAASLAALKGKSQSNIGRVAYTTVLAAVA-GAGEH 68          
BLAST of mRNA_C-linearis_contig106.1004.1 vs. uniprot
Match: A0A6H5L5A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5A0_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.460e-6
Identity = 32/95 (33.68%), Postives = 52/95 (54.74%), Query Frame = 0
Query:   18 RPQTAEEKHRAEGVGMVENDPVLKEEINQKL--GVSDEG--RVDAVHAENTRAMATSLAALELNCKSNIGRVAYNNRIGGCSWGRGAHMLPRESV 108
            R +   EK R+  + +++NDP+L E++   L  G +++   +V A+ A NTRA+  SL AL+ +C S+IG   Y   +   + G GAH      V
Sbjct:   14 REEAVAEKRRSSAMDLMQNDPMLMEQVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAA-GAGAHTCTDTDV 107          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.1004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KLZ5_9PHAE7.610e-1351.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K614_9PHAE2.730e-1253.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J5R2_9PHAE4.740e-1155.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5A0_9PHAE1.460e-633.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:430344..430856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.1004.1mRNA_C-linearis_contig106.1004.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 430331..431259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.1004.1 ID=prot_C-linearis_contig106.1004.1|Name=mRNA_C-linearis_contig106.1004.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=109bp
MVTGSTRTRGDNVAGRPRPQTAEEKHRAEGVGMVENDPVLKEEINQKLGV
SDEGRVDAVHAENTRAMATSLAALELNCKSNIGRVAYNNRIGGCSWGRGA
HMLPRESV*
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