Homology
BLAST of mRNA_C-linearis_contig105.928.1 vs. uniprot
Match:
D7FXV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV5_ECTSI)
HSP 1 Score: 220 bits (560), Expect = 1.660e-70
Identity = 106/142 (74.65%), Postives = 122/142 (85.92%), Query Frame = 0
Query: 1 MKTRYSSLVVLLVASWIGQGHSWGGGRRAEDRAHVAAWEAFSADLSRGDCTMDSLSEQASVTLPIGQTVSKDEYRLACESSMGDTTVGNISFHDEKVVTIDRSNFSVEVVVTTEAVSLKGGVPQEVTYPAAFFMSIDARTNK 142
MKTR+S+LV+ +VASW+G SWGGGRRAED+ H AWEAFSAD+ RGDCTMDSLSEQASVTLPIGQTV+KDEYRLACE+SMGDTTVG S HD K+V+IDR NFSVE +VT +A SLK G Q+V+YPAAFFM+ID RTNK
Sbjct: 1 MKTRHSALVIFIVASWVGLAQSWGGGRRAEDKTHTLAWEAFSADMGRGDCTMDSLSEQASVTLPIGQTVTKDEYRLACENSMGDTTVGETSLHDGKLVSIDRVNFSVEAMVTAKATSLKTGFQQDVSYPAAFFMTIDLRTNK 142
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.928.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M K T R Y S S L V V L L V A S W I G Q G H S W G G G R R A E D R A H V A A W E A F S A D L S R G D C T M D S L S E Q A S V T L P I G Q T V S K D E Y R L A C E S S M G D T T V G N I S F H D E K V V T I D R S N F S V E V V V T T E A V S L K G G V P Q E V T Y P A A F F M S I D A R T N K K Y A Y T R R T S R C W L R E D I P W Y R R A A S N P S S A Q H D R S S C * 20 40 60 80 100 120 140 160 180 Expect = 1.66e-70 / Id = 74.65 Sequence D7FXV5_ECTSI
Match Name E-value Identity Description
D7FXV5_ECTSI 1.660e-70 74.65 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M K T R Y S S L V V L L V A S W I G Q G H S W G G G R R A E D R A H V A A W E A F S A D L S R G D C T M D S L S E Q A S V T L P I G Q T V S K D E Y R L A C E S S M G D T T V G N I S F H D E K V V T I D R S N F S V E V V V T T E A V S L K G G V P Q E V T Y P A A F F M S I D A R T N K K Y A Y T R R T S R C W L R E D I P W Y R R A A S N P S S A Q H D R S S C * 20 40 60 80 100 120 140 160 180 Score = Score = Score = Score = Score = Score = 0.713 Sequence SIGNAL_PEPTIDE_N_REGION SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE SIGNAL_PEPTIDE_H_REGION NON_CYTOPLASMIC_DOMAIN SignalP-noTM
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..5 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 18..22 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..22 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 6..17 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 23..179 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..22
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig105.928.1 ID=prot_C-linearis_contig105.928.1|Name=mRNA_C-linearis_contig105.928.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=180bp back to top