prot_C-linearis_contig10.677.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.677.1
Unique Nameprot_C-linearis_contig10.677.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length575
Homology
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BLAST of mRNA_C-linearis_contig10.677.1 vs. uniprot
Match: D7G160_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G160_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 1.220e-81
Identity = 159/309 (51.46%), Postives = 210/309 (67.96%), Query Frame = 0 
Query:  118 LLERAGEAMQRRSENQDHRGADHLALAPEVLERLRKALPLLSDKRLHDKTTLLAVFQKCEEAVLAATDDCSGDVAASRKTLEMAKEIVEGMLAHPRLEEVRTSSCGARLGRYIRELDHFLEALTRRLHPGGTQTSAGEEGFAAGEALRLPDGRWGQEERTAMGQFCEERFIALQPHVSDLERVEKMRQYIEMALRERFREGKVLVFGSAASTLSVPESDIDLTLHLPSRATLVRELKDVVELERKETLRIEERNSEGVKLLQQRASIQKKLSRLKGAARERKNSLADMRRSRERIVKRLHTWKASEVER 426
            +LERA E M R  ++++HRGA+H AL PEVLE L+ ALPL++DK LHDK  LL+VFQ CEEAVLAA+DDCS D    ++TL +AK +V  MLAH RL EVRTS+C  RL RY++E+D  L  L  +L        +G  G + G    L    W +EERT M Q CE+RF+AL PH S  E VE +RQ +E ALR+RF + +VLVFGS+A +LS PESDIDLTL+LPSR  L++ELK VVE + +  L  EE  +  V+LL+QRAS++ KLS+L G  R + N L+ +  SR++  ++LH  KA+   R
Sbjct:   77 VLERARELMARHKQDREHRGAEHFALVPEVLECLQIALPLINDKTLHDKAKLLSVFQLCEEAVLAASDDCSDDNDVCKRTLGLAKAVVVDMLAHKRLGEVRTSTCRERLDRYVQEIDDLLRRLDEQLIHSTDYARSGGGGASGGGPAPLLANTWSEEERTVMNQLCEQRFLALLPHTSYYETVEGVRQGVEWALRQRFSQARVLVFGSSAMSLSTPESDIDLTLYLPSRVELIQELKGVVESKTRAVLMAEEGQAHAVQLLKQRASMEDKLSKLNGTKRGKLNDLSALTLSRDKTAQKLHAMKAAHTAR 385
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BLAST of mRNA_C-linearis_contig10.677.1 vs. uniprot
Match: A0A6H5K7K2_9PHAE (NTP_transf_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K2_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 1.380e-80
Identity = 160/305 (52.46%), Postives = 209/305 (68.52%), Query Frame = 0 
Query:  118 LLERAGEAMQRRSENQDHRGADHLALAPEVLERLRKALPLLSDKRLHDKTTLLAVFQKCEEAVLAATDDCSGDVAASRKTLEMAKEIVEGMLAHPRLEEVRTSSCGARLGRYIRELDHFLEALTRRLHPGGTQTSAGEEGFAAGEALRLPDGRWGQEERTAMGQFCEERFIALQPHVSDLERVEKMRQYIEMALRERFREGKVLVFGSAASTLSVPESDIDLTLHLPSRATLVRELKDVVELERKETLRIEERNSEGVKLLQQRASIQKKLSRLKGAARERKNSLADMRRSRERIVKRLHTWKAS 422
            LLERA E M R  ++++HRGA+H+AL PEVLE L+ ALPL+++KRLHDK  LL+VFQ CEEAVLAA+DDCS D     +TL +AK +V  MLAH RL EVRTS+C  RL RY++E+D  L  L   L        +G  G + G  + L    W +EERT M Q CE RF+AL PH S  E VE +RQ +E ALR+RF + +VLVFGS+A +LS PESDIDLTLHLPSR  L++ELK VVE + +  L  EE  +  V+LL+QRAS++ KLS+L G  R + N L+ +  SR++  ++LH  KA+
Sbjct:   81 LLERARELMARHKQDREHRGAEHVALVPEVLECLQIALPLINEKRLHDKAKLLSVFQLCEEAVLAASDDCSDDNDVCTRTLGLAKAVVVDMLAHKRLGEVRTSTCRERLDRYVQEIDDLLWRLDEMLTHSTGNARSGGGGASGGGPVPLLANPWSEEERTVMNQLCEHRFLALVPHTSYYETVEGVRQGVEWALRQRFSQARVLVFGSSAMSLSTPESDIDLTLHLPSRVELMQELKGVVESKTRAVLMAEEGQAHAVQLLKQRASMEDKLSKLNGTKRGKLNDLSALTLSRDKSAQKLHAMKAA 385
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G160_ECTSI1.220e-8151.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7K2_9PHAE1.380e-8052.46NTP_transf_2 domain-containing protein n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.460.10coord: 295..444
e-value: 1.1E-7
score: 33.8
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 277..360
IPR002934Polymerase, nucleotidyl transferase domainPFAMPF01909NTP_transf_2coord: 310..358
e-value: 1.8E-4
score: 21.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:3778831..3785629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.677.1mRNA_C-linearis_contig10.677.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 3778693..3797039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.677.1 ID=prot_C-linearis_contig10.677.1|Name=mRNA_C-linearis_contig10.677.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=575bp
MTSHEQQQAQLVDIGLGTTAEQQQQQQQRAPGQGLKLQPQESKGPTPLLQ
KPTAAAAAASPLREQRSSLDTGSASNNNNTSSRSTSNTQVGDGEAPSHEA
SVVATPPAQQEAGELKSLLERAGEAMQRRSENQDHRGADHLALAPEVLER
LRKALPLLSDKRLHDKTTLLAVFQKCEEAVLAATDDCSGDVAASRKTLEM
AKEIVEGMLAHPRLEEVRTSSCGARLGRYIRELDHFLEALTRRLHPGGTQ
TSAGEEGFAAGEALRLPDGRWGQEERTAMGQFCEERFIALQPHVSDLERV
EKMRQYIEMALRERFREGKVLVFGSAASTLSVPESDIDLTLHLPSRATLV
RELKDVVELERKETLRIEERNSEGVKLLQQRASIQKKLSRLKGAARERKN
SLADMRRSRERIVKRLHTWKASEVEREKKTMAHESTETKAKVKVNNGSAS
SGPSTASAPPAPASPATTPAQTLSASASSSAAGGSAGATTAVPSSSSSSS
SSSRSTRPVMTTVKATTALAVSAAKAWAEETPTSPRQTMKSAGKKRTRTA
SGRRGRSRTPLGRRRARGMRKLSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002934Polymerase_NTP_transf_dom