prot_C-linearis_contig10.672.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.672.1
Unique Nameprot_C-linearis_contig10.672.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length84
Homology
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BLAST of mRNA_C-linearis_contig10.672.1 vs. uniprot
Match: A0A6H5KLU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU9_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.090e-13
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:   44 QEIQWPDAVERAAHADFLQKYGHKNYPRVAYIADGTMVGMR 84
            +EIQWPDA ERAAH  FLQ +GH ++PRVAYIADGTMV MR
Sbjct:  105 EEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTMVNMR 145
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BLAST of mRNA_C-linearis_contig10.672.1 vs. uniprot
Match: A0A6H5KWG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG0_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 8.230e-13
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:   44 QEIQWPDAVERAAHADFLQKYGHKNYPRVAYIADGTMVGMR 84
            +EIQWPDA ERAAH  FLQ +GH ++PRVAYIADGTMV MR
Sbjct:  213 EEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTMVNMR 253
[Close]
BLAST of mRNA_C-linearis_contig10.672.1 vs. uniprot
Match: A0A6H5KIX2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX2_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.080e-12
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:   44 QEIQWPDAVERAAHADFLQKYGHKNYPRVAYIADGTMVGMR 84
            +EIQWPDA ERAAH  FLQ +GH ++PRVAYIADGTMV MR
Sbjct:   53 EEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTMVNMR 93
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KLU9_9PHAE2.090e-1375.61Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWG0_9PHAE8.230e-1375.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIX2_9PHAE1.080e-1275.61DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:3583606..3584331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.672.1mRNA_C-linearis_contig10.672.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 3583497..3584331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.672.1 ID=prot_C-linearis_contig10.672.1|Name=mRNA_C-linearis_contig10.672.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=84bp
MRILPKKRDKKTDKHREEQTKLAEKRWVEQTRMVEVRQKKADIQEIQWPD
AVERAAHADFLQKYGHKNYPRVAYIADGTMVGMR
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