prot_C-linearis_contig10.667.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.667.1
Unique Nameprot_C-linearis_contig10.667.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length75
Homology
BLAST of mRNA_C-linearis_contig10.667.1 vs. uniprot
Match: A0A6H5KLU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU9_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.840e-37
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    1 MFRRDTMFEDMALKYGRCKGTWSNDFHDMTMAAQNMPCLQEEIQWPDAVERARHADFLETYGHPDLPRVAYIADG 75
            M RRDT+FEDMAL YGRC GT+ N+F D T AAQNMPCLQEEIQWPDA ERA H  FL+T+GHPD PRVAYIADG
Sbjct:   65 MLRRDTLFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADG 139          
BLAST of mRNA_C-linearis_contig10.667.1 vs. uniprot
Match: A0A6H5KWG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG0_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 8.010e-36
Identity = 58/75 (77.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 MFRRDTMFEDMALKYGRCKGTWSNDFHDMTMAAQNMPCLQEEIQWPDAVERARHADFLETYGHPDLPRVAYIADG 75
            M RRDT FEDMAL YGRC GT+ N+F D T AAQNMPCLQEEIQWPDA ERA H  FL+T+GHPD PRVAYIADG
Sbjct:  173 MLRRDTCFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADG 247          
BLAST of mRNA_C-linearis_contig10.667.1 vs. uniprot
Match: A0A6H5KIX2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX2_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 8.720e-34
Identity = 57/75 (76.00%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 MFRRDTMFEDMALKYGRCKGTWSNDFHDMTMAAQNMPCLQEEIQWPDAVERARHADFLETYGHPDLPRVAYIADG 75
            M RRDT+FEDMAL  GRC GT+ N+F DMT AAQNMP LQEEIQWPDA ERA H  FL+T+GHPD PRVAYIADG
Sbjct:   13 MLRRDTLFEDMALACGRCAGTFHNEFKDMTAAAQNMPSLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADG 87          
BLAST of mRNA_C-linearis_contig10.667.1 vs. uniprot
Match: A0A6H5JZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF6_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 9.760e-22
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    1 MFRRDTMFEDMALKYGRCKGTWSNDFHDMTMAAQNMPCLQEEIQWPDAVERARHADFLETYGHPDLPRVAYI 72
            + RRDT+FED+AL YGRC GT+ N+F DMT AAQNMPCLQ EIQWP+  E+A H  FL+    P + R++ +
Sbjct:  169 ILRRDTLFEDVALAYGRCAGTYHNEFKDMTAAAQNMPCLQVEIQWPEPAEQAAHCTFLQ----PGVTRISLV 236          
BLAST of mRNA_C-linearis_contig10.667.1 vs. uniprot
Match: A0A6H5JMX0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX0_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 6.620e-16
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    1 MFRRDTMFEDMALKYGRCKGTWSNDFHDMTMAAQNMPCLQEEIQWPDAVERARHADFLETYGHPD 65
            M RRDT FEDM+LKYGR KGTWSN+FHDMTMAAQ+MPCLQ+      ++         + + HPD
Sbjct:  197 MLRRDTSFEDMSLKYGRSKGTWSNEFHDMTMAAQDMPCLQQVETVRGSLSDRGALLSSDVFQHPD 261          
BLAST of mRNA_C-linearis_contig10.667.1 vs. uniprot
Match: A0A6H5KI20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI20_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.600e-13
Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 MFRRDTMFEDMALKYGRCKGTWSNDFHDMTMAAQNMPCLQEEIQWPDAVERAR 53
            M RRDT+FEDMAL YGRC GT+ N+F D T AAQNMPCLQEE    D     R
Sbjct:  177 MLRRDTLFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEAAAGDLSNEER 229          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KLU9_9PHAE1.840e-3777.33Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWG0_9PHAE8.010e-3677.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIX2_9PHAE8.720e-3476.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JZF6_9PHAE9.760e-2256.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMX0_9PHAE6.620e-1656.92DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KI20_9PHAE1.600e-1364.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:3543959..3544731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.667.1mRNA_C-linearis_contig10.667.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 3543959..3544756 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.667.1 ID=prot_C-linearis_contig10.667.1|Name=mRNA_C-linearis_contig10.667.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=75bp
MFRRDTMFEDMALKYGRCKGTWSNDFHDMTMAAQNMPCLQEEIQWPDAVE
RARHADFLETYGHPDLPRVAYIADG
back to top