prot_C-linearis_contig10.622.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig10.622.1
Unique Name	prot_C-linearis_contig10.622.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	171

Homology

[Close]

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Match: D7G8S5_ECTSI (V-type proton ATPase proteolipid subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S5_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 3.500e-81
Identity = 151/165 (91.52%), Postives = 158/165 (95.76%), Query Frame = 0

Query:    6 LETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANSFSSYSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSCE 170
            +ETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIL+G+I  PS +   N+FSS+SGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQ SYSC+
Sbjct:    1 METCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGAIGMPSDT--GNTFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQQSYSCD 163

[Close]

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Match: A0A835Z1C3_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C3_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.210e-75
Identity = 145/165 (87.88%), Postives = 152/165 (92.12%), Query Frame = 0

Query:    5 SLETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANSFSSYSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 169
            SLETCPSSAAFFGFMG A+++VF NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIL GSI+ P +      FSS+SGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEAL LYG+IVALILSQ SYSC
Sbjct:    4 SLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTK-FSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC 167

[Close]

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Match: F0YK80_AURAN (V-type proton ATPase proteolipid subunit n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YK80_AURAN)

HSP 1 Score: 223 bits (567), Expect = 8.840e-72
Identity = 138/167 (82.63%), Postives = 152/167 (91.02%), Query Frame = 0

Query:    5 SLETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANS-FSSYSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSCE 170
            S ETCP+SA FFGFMGV S++VF NIGAAYGTAKSGVGI+SMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIL G+I+ P + +   + FSS+SGYA+LAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ S  C+
Sbjct:    6 STETCPTSAPFFGFMGVTSALVFANIGAAYGTAKSGVGIASMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGAITKPDAGSGGTTKFSSFSGYAYLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQSADCQ 172

[Close]

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Match: A0A7S3GT47_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT47_9STRA)

HSP 1 Score: 218 bits (554), Expect = 8.680e-70
Identity = 135/170 (79.41%), Postives = 152/170 (89.41%), Query Frame = 0

Query:    1 MSD-FSLETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANSFSSYSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 169
            MSD  S ETCP+SA FFGFMGV +++ F NIGAAYGTAKSGVGI+SMGVM+PGLVM+NIIPVVMAGVLGIYGLIVAVI+ GSI+ PS+   A  +SS++GYA L+AGLCCGLSG XXXXXXXXX DAGVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ S+SC
Sbjct:    1 MSDTVSRETCPTSAPFFGFMGVTAALCFANIGAAYGTAKSGVGIASMGVMHPGLVMKNIIPVVMAGVLGIYGLIVAVIIQGSITVPSADG-ATKYSSFTGYAHLSAGLCCGLSGLXXXXXXXXXGDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQSFSC 169

[Close]

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Match: A0A7S2RWN8_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWN8_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.240e-67
Identity = 132/163 (80.98%), Postives = 149/163 (91.41%), Query Frame = 0

Query:    7 ETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANSFSSYSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 169
            E CP+SA FFGFMGV++++VF NIGAAYGTAKSGVGI+SMGVM P LVMRNIIPV+MAGVLGIYGLIVAVIL GSI+ P+++   + FSS+SG+AFLAAGLCCGLSGXXXXXXXXXXX AGVRAVGQQE+LFVG+ILILIFAEALGLYG+IVALILSQ S SC
Sbjct:    4 ELCPTSAPFFGFMGVSAALVFANIGAAYGTAKSGVGIASMGVMKPNLVMRNIIPVIMAGVLGIYGLIVAVILNGSITKPANNE--SKFSSFSGFAFLAAGLCCGLSGXXXXXXXXXXXXAGVRAVGQQEKLFVGVILILIFAEALGLYGLIVALILSQQSVSC 164

[Close]

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Match: B8BTR9_THAPS (V-type proton ATPase proteolipid subunit n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8BTR9_THAPS)

HSP 1 Score: 211 bits (538), Expect = 1.870e-67
Identity = 132/165 (80.00%), Postives = 147/165 (89.09%), Query Frame = 0

Query:    6 LETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANSFSSYSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSCE 170
            +ETCP+SA FFGFMGV +++VF NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVI+ GSI AP +    + +S Y+G+A LAAGLCCGL  XXXXXXXXXXX  GVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ+S+ CE
Sbjct:    1 METCPASAPFFGFMGVTAALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSIVAPQNGL--SQYSLYTGFAHLAAGLCCGLXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSFVCE 163

[Close]

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Match: A0A7S3LI96_9STRA (V-type proton ATPase proteolipid subunit n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LI96_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.050e-66
Identity = 132/165 (80.00%), Postives = 147/165 (89.09%), Query Frame = 0

Query:    6 LETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANSFSSYSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSCE 170
            +ETCP+SA FFGFMGV S++VF NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVI+ GSI +P +    + +S Y+G+A LAAGLCCGL  XXXXXXXXXXX  GVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ+S+ CE
Sbjct:   54 METCPASAPFFGFMGVTSALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSILSPQNGL--SQYSLYTGFAHLAAGLCCGLXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSFVCE 216

[Close]

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Match: A0A7S2GLL8_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLL8_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.930e-66
Identity = 130/165 (78.79%), Postives = 144/165 (87.27%), Query Frame = 0

Query:    6 LETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANSFSSYSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSCE 170
            +E CP+ A FFGFMGV+S++VF NIGAAYGTAKSG+GI+SMGVM P LVMRNIIPV+MAGVLGIYGLIVAVIL GSI+ P+       FSSYSG+AFLAAGLCCGLSGXXXXXXXXXXX  GVRAVGQQE+LFVG+ILILIFAEALGLYG+IVALILS   Y CE
Sbjct:   10 VEACPTYAPFFGFMGVSSALVFANIGAAYGTAKSGIGIASMGVMKPELVMRNIIPVIMAGVLGIYGLIVAVILQGSITKPTEGV--TKFSSYSGFAFLAAGLCCGLSGXXXXXXXXXXXXXGVRAVGQQEKLFVGVILILIFAEALGLYGLIVALILSMQIYECE 172

[Close]

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Match: A0A7R9WX88_9STRA (V-type proton ATPase proteolipid subunit n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WX88_9STRA)

HSP 1 Score: 210 bits (534), Expect = 9.930e-66
Identity = 134/169 (79.29%), Postives = 145/169 (85.80%), Query Frame = 0

Query:    1 MSDFSLETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANSFSSYSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 169
            MS    ETCP+SA FFGFMGV S++VF NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVI+ GSI+AP     A  +S Y+G+A LAAGLCC    XXXXXXXXXXX  GVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ+SY C
Sbjct:   77 MSSAITETCPASAPFFGFMGVTSALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSITAPQGGVSA--YSLYTGFAHLAAGLCCXXXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSYEC 243

[Close]

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Match: A0A7R9UBU4_9STRA (V-type proton ATPase proteolipid subunit n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9UBU4_9STRA)

HSP 1 Score: 207 bits (526), Expect = 4.890e-65
Identity = 127/169 (75.15%), Postives = 146/169 (86.39%), Query Frame = 0

Query:    2 SDFSLETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANSFSSYSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSCE 170
            +D + E CP SA FFGFMGVAS++VF NIGAAYGTAKSGVGI+SMGV NP  +MRN+IPVVMAGVLGIYGLIVAVIL   +  P+  +   ++SSY+G+A LAAGLCCGLSGXXXXXXXXXXX  GVRAVGQQ++LFVGMILILIFAEALGLYG+IVA+ILSQ S+SCE
Sbjct:   40 TDSTTENCPLSAPFFGFMGVASALVFANIGAAYGTAKSGVGIASMGVTNPEKIMRNLIPVVMAGVLGIYGLIVAVILNQGLETPTEGSGKTTYSSYTGFAHLAAGLCCGLSGXXXXXXXXXXXXXGVRAVGQQDKLFVGMILILIFAEALGLYGLIVAIILSQQSFSCE 208

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot

BLAST of mRNA_C-linearis_contig10.622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8S5_ECTSI	3.500e-81	91.52	V-type proton ATPase proteolipid subunit n=1 Tax=E...	[more]
A0A835Z1C3_9STRA	1.210e-75	87.88	V-type proton ATPase proteolipid subunit n=1 Tax=T...	[more]
F0YK80_AURAN	8.840e-72	82.63	V-type proton ATPase proteolipid subunit n=2 Tax=P...	[more]
A0A7S3GT47_9STRA	8.680e-70	79.41	V-type proton ATPase proteolipid subunit n=1 Tax=S...	[more]
A0A7S2RWN8_9STRA	1.240e-67	80.98	V-type proton ATPase proteolipid subunit n=1 Tax=R...	[more]
B8BTR9_THAPS	1.870e-67	80.00	V-type proton ATPase proteolipid subunit n=19 Tax=...	[more]
A0A7S3LI96_9STRA	1.050e-66	80.00	V-type proton ATPase proteolipid subunit n=2 Tax=A...	[more]
A0A7S2GLL8_9STRA	1.930e-66	78.79	V-type proton ATPase proteolipid subunit n=1 Tax=D...	[more]
A0A7R9WX88_9STRA	9.930e-66	79.29	V-type proton ATPase proteolipid subunit n=2 Tax=C...	[more]
A0A7R9UBU4_9STRA	4.890e-65	75.15	V-type proton ATPase proteolipid subunit n=2 Tax=P...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 32..56 score: 72.53 coord: 114..140 score: 78.75 coord: 141..164 score: 77.52 coord: 58..82 score: 67.26
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 103..162 e-value: 6.3E-22 score: 77.7 coord: 19..78 e-value: 1.7E-11 score: 44.3
None	No IPR available	GENE3D	1.20.120.610		coord: 13..168 e-value: 1.2E-54 score: 185.9
None	No IPR available	PANTHER	PTHR10263:SF5	V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT	coord: 7..167
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 7..167
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 126..136
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 58..80
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 163..170
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 100..125
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..37
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 137..162
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 81..99
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 38..57
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 58..80
None	No IPR available	TMHMM	TMhelix		coord: 102..124
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 137..159
IPR011555	V-ATPase proteolipid subunit C, eukaryotic	TIGRFAM	TIGR01100	TIGR01100	coord: 15..128 e-value: 3.0E-43 score: 144.4
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 95..163
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 14..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig10	contig	C-linearis_contig10:2949155..2952658 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig10.622.1	mRNA_C-linearis_contig10.622.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig10 2949086..2953470 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig10.622.1 ID=prot_C-linearis_contig10.622.1|Name=mRNA_C-linearis_contig10.622.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=171bp
MSDFSLETCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMN
PGLVMRNIIPVVMAGVLGIYGLIVAVILAGSISAPSSSTYANSFSSYSGY
AFLAAGLCCGLSGLAAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEA
LGLYGMIVALILSQSSYSCE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000245	ATPase_proteolipid_csu
IPR002379	ATPase_proteolipid_c-like_dom
IPR011555	ATPase_proteolipid_su_C_euk
IPR035921	F/V-ATP_Csub_sf