prot_C-linearis_contig10.619.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.619.1
Unique Nameprot_C-linearis_contig10.619.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length528
Homology
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Match: D7G8R0_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R0_ECTSI)

HSP 1 Score: 752 bits (1942), Expect = 1.510e-270
Identity = 386/438 (88.13%), Postives = 406/438 (92.69%), Query Frame = 0
Query:   80 MIRRGGAPAQLWTVAGIKAAGAKVWGPLMNVVTPQKLFLFVLFQIVYARLLRLLYKLQLQVWRLVRKHDPQPYEHSVLGFLEPRLRMLSRILVVAYGLKSGVRVLIASGWNANPKLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSIFLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVARVVQSANATMTSVLYVDMNDPAPIGKAPLKGMINPAPAQAVPQSGLPQSVAAPQ-VFARGSDTKLLEEQDAAVQINGV 516
            M+RRG APAQLW++AG+KAAGA+ WGPL NVVTPQKLFLF+LFQIVY RLLRLLY+LQ+QVWRLVRKHDPQPYE SVLGF+EPRLR LSR LVVAY LKSGVRVLIASGWNANP+LAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSI LLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIK ALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEV RVVQ A+ATMTSVLYVDMN+PAPIGK PL GMIN A  + V QSGLP+ VAAP+ +  +G++   +EE D    ING 
Sbjct:    1 MLRRGSAPAQLWSIAGLKAAGARFWGPLTNVVTPQKLFLFLLFQIVYRRLLRLLYRLQVQVWRLVRKHDPQPYEQSVLGFVEPRLRTLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKTALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGASATMTSVLYVDMNNPAPIGKVPLAGMINSAQNKGVAQSGLPKVVAAPKDLNPKGAEGASIEE-DGPRPINGT 437          
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Match: A0A4D9D8J2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J2_9STRA)

HSP 1 Score: 352 bits (902), Expect = 4.330e-112
Identity = 175/337 (51.93%), Postives = 236/337 (70.03%), Query Frame = 0
Query:  107 LMNVVTPQKLFLFVLFQIVYARLLRLLYKLQLQVWRLVRKHD-PQPYEHSVLGFLEPRLRMLSRILVVAYGLKSGVRVLIASGWNANPKLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSIFLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVARVV 442
            L  ++ P  L LFV  +++Y +  R L+     +W+     D P+ YE SVLGF+EP+L  L+  + V Y +   + +LI  GW      A++++ ++Y  Y  YFV+E K+ +L  W+PSL+ D+R+ +I +RS SV+ W + + +  E ISA+L+IP++STLAFGGIGGLA GLA KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTRLRGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D   + E++  IK AL+ +P +D+LSPFRVH   F    L +   CYFATKS DE+LYLQQ+AL+E+ RVV
Sbjct:    6 LRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGILDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVV 342          
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Match: W7UBI9_9STRA (Small-conductance mechanosensitive channel n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBI9_9STRA)

HSP 1 Score: 353 bits (905), Expect = 3.020e-110
Identity = 188/388 (48.45%), Postives = 255/388 (65.72%), Query Frame = 0
Query:   64 VPRRGAVRSRPATRLSMIRRG--------GAPAQLWTVAGIKAAGAKVWGPLMNVVTPQKLFLFVLFQIVYARLLRLLYKLQLQVWRLVRKHD-PQPYEHSVLGFLEPRLRMLSRILVVAYGLKSGVRVLIASGWNANPKLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSIFLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVARVV 442
            VPR+GA+ S     L  +RR         G   Q+WT+  +          L  ++ P  L LFV  +++Y +  R L+     +W+     D P+ YE SVLGF+EP+L  L+  + V Y +   + +LI  GW      A++++ ++Y  Y  YFV+E K+ +L  W+PSL+ D+R+ +I +RS SV+ W + + +  E ISA+L+IP++STLAFGGIGGLA GLA KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTRLRGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D   + E++  IK AL+ +P +D+LSPFRVH   F    L +   CYFATKS DE+LYLQQ+AL+E+ RVV
Sbjct:  157 VPRKGALSS---LVLDPVRRAVELFPNSKGVIDQVWTMLPLA---------LRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVV 532          
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Match: A0A6U0TNP3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TNP3_9STRA)

HSP 1 Score: 336 bits (862), Expect = 1.800e-105
Identity = 178/362 (49.17%), Postives = 235/362 (64.92%), Query Frame = 0
Query:   92 TVAGIKAAGAKVWG----PLMNVVTPQKLFLFVLFQIVYARLLRLLYKLQLQVWRLVRKHDPQP-YEHSVLGFLEPRLRMLSRILVVAYGLKSGVRVLIASGWNANPKLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSIFLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVARVVQSANAT 448
            T AG  AA   VW     PL  ++ P+ L  +++F+  Y+R LRL Y LQ  + RL++K  P P Y  +VLGFLEPR   LSR+  + Y +   +  +     N  P L ++ + + Y  YAGYF++E +RF  P W P L  DKR+ +I +RS SV  W+I ++ + + IS +  +P++S+LA GG+GG+AIGLA KDV+SNF GGLMLL+ EPF PGD +TF   G    G+VERVGWYQTR+R RDTRP YVPN  F +TMVTNMDRITHRKFES F ++     +V  +L  IK AL+  P +DLLSPFR +L+     GL+ +V+CYFATKS DEFL LQQ   LEV R V+S   T
Sbjct:   60 TAAGYNAA-LNVWAEVPTPLRVLMRPRDLLAYLIFRTCYSRALRLGYLLQTLLSRLLKKDIPPPAYLQTVLGFLEPRFAQLSRLTGLIYLVNVSISAIGLIDLNIRPGLDRLFTKLAYTAYAGYFLNEVRRFVTPRWFPKLAEDKRRAYIVDRSASVFFWTITIVLLLDQISTFFNVPLSSSLALGGVGGVAIGLASKDVVSNFVGGLMLLITEPFTPGDFITFLYQGQWMIGKVERVGWYQTRIRNRDTRPVYVPNAFFVNTMVTNMDRITHRKFESEFHIQLDSFAQVEGLLDDIKIALQGFPKLDLLSPFRANLIAVESDGLRFSVLCYFATKSLDEFLMLQQKVFLEVGRCVESRGLT 420          
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Match: A0A7S0SR49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR49_9STRA)

HSP 1 Score: 261 bits (668), Expect = 3.140e-79
Identity = 129/261 (49.43%), Postives = 176/261 (67.43%), Query Frame = 0
Query:  190 NANPKLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSIFLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLS-PFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVARVVQSANATM 449
            +  P    +++ V Y  Y   F D  K  FL +++P+L A++R+ ++  RS SV+ W + +L   E++S YL++P++STLAFGG GGLA+GL+ +DV +NF GG++LL  EPF PGDMVTF+ G     GRVERVGW QTR+RGRDTRPTYVPN  F  T VTNM+RITHRKFE+   LRY D   +++++  IK  L+ +P +D ++ PFR   V      L I V CYF+TKS DEFL LQQ A LE+ + V S NA++
Sbjct:   20 SVKPDFHIIVARVSYAIYLTNFFDMFKLKFLNLFLPNLNANRRQSYVVQRSSSVILWVVGVLIACEMVSTYLKVPLSSTLAFGGFGGLALGLSARDVAANFLGGILLLFNEPFTPGDMVTFRSGNTELLGRVERVGWGQTRIRGRDTRPTYVPNSHFVQTAVTNMERITHRKFEAIVPLRYQDHAVMSDVVTKIKEGLRKIPKLDTMTQPFRCSFVKVGSYSLDIEVTCYFSTKSIDEFLPLQQAANLEIIKAVYSCNASL 280          
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Match: A0A6H5L1M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M0_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 5.050e-75
Identity = 128/165 (77.58%), Postives = 132/165 (80.00%), Query Frame = 0
Query:  222 VWIPSLKADKRKGFIYNRSLSVLTWSIFLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGK-------------------------------DVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMD 355
            +WIPSLKADKRKGFIYNRSLSVLTWSI LLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGK                               DVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMV++ +
Sbjct:    1 MWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKEALFVACVGIHGPRSPPLRSSLAVVCSVAKKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVSSRE 165          
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Match: A0A835ZID6_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID6_9STRA)

HSP 1 Score: 253 bits (645), Expect = 2.110e-71
Identity = 136/271 (50.18%), Postives = 172/271 (63.47%), Query Frame = 0
Query:  111 VTPQKLFLFVLFQIVYARLLRLLYKLQLQVWRLVRKHDP-------QPYEHSVLGFLEPRLRMLSRILVVAYGLKSGVRVLIASGWNANPKLAKVLSDVVYCWYAGYFVDEAKR----------------FFLPVWIPSLKADKRKGFIYNRSLSVLTWSIFLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRIT 358
            + P+ L LFV F +VY + LR++Y LQ +  R +            +P+E S LGFLEPRLR L+R++   Y     +  L   G+   P     +S VV   YAGYF+DE KR                F+LPV  P L+ D RK FIYNR+ SVLTW++  L + +VISA+L IP+ ST+AFGG GG+A G A K +  NFFGGL LLL+EPF+PGDMV F+ GG   EGRVERVGWYQTRLRGRDTRPTY+PN +F   +VTNMDRI+
Sbjct:  209 INPRDLALFVGFYLVYKKALRVIYGLQAKAMRAMASRSGSGAPAAVKPFEQSWLGFLEPRLRSLTRVMAGLYVANGALGGLANLGYRLRPGTQDFVSTVVATLYAGYFIDELKRQQRSRDAFCCLSCAPQFYLPVIWPELQNDMRKAFIYNRTTSVLTWTLVALGLLQVISAFLHIPLASTMAFGGAGGIAFGFAAKGIFENFFGGLTLLLSEPFVPGDMVHFEYGGEVMEGRVERVGWYQTRLRGRDTRPTYIPNNVFLSNLVTNMDRIS 479          
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Match: A0A2U2AKE7_9GAMM (Mechanosensitive ion channel protein MscS n=2 Tax=Ignatzschineria TaxID=112008 RepID=A0A2U2AKE7_9GAMM)

HSP 1 Score: 155 bits (393), Expect = 9.440e-39
Identity = 88/236 (37.29%), Postives = 127/236 (53.81%), Query Frame = 0
Query:  229 ADKRKGFIYNRSLSVLTWSIFLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVARVVQSANATM---TSVLYVDMNDPA 461
            ADK    I  R L ++ + I LL   E    +  + ++  + FGGIGG+AIG A KDVLSNFF G+ML    PF  GD +       + EG V+ +GW  T++   D RP Y+PN +FS   V N  R+T+R+  +   LRY D+ KVA ++  I+  L+  P IDL     V+  DF +S L I + C+  T  + E+L  QQ   L++  +V    A     T +LY+D N+ A
Sbjct:  124 ADKTSAKIITRVLKIVIFLIVLLLFGE----HFGLSLSGLMTFGGIGGIAIGFASKDVLSNFFSGVMLFFERPFNIGDWINSPDR--KIEGVVKEIGWRSTKIMTFDNRPLYIPNALFSSISVENPGRMTNRRINTEIGLRYEDSDKVAAVVNDIRTMLQQNPKIDLTQTLLVYFNDFGDSSLNIMIYCFTKTVKWAEWLEAQQEVYLKIIEIVHKNGADFADTTQLLYLDNNEGA 353          
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Match: A0A2U2AKG0_9GAMM (Mechanosensitive ion channel protein MscS n=1 Tax=Ignatzschineria indica TaxID=472583 RepID=A0A2U2AKG0_9GAMM)

HSP 1 Score: 152 bits (383), Expect = 3.260e-38
Identity = 88/236 (37.29%), Postives = 124/236 (52.54%), Query Frame = 0
Query:  229 ADKRKGFIYNRSLSVLTWSIFLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVARVVQSANATM---TSVLYVDMNDPA 461
            ADK    I  R L +  + I LL   E    +  + ++  + FGGIGG+AIG A KDVLSNFF G+ML    PF  GD +       + EG V+ +GW  T++   D RP Y+PN +FS   V N  R+T+R+  +   LRY DA KV  ++  I+  L+  P IDL     V+   F ES L I + C+  T  + E+L  QQ   L++  +V    A     T +LY+D N+ A
Sbjct:   48 ADKTSAKIITRVLKIAIFLIVLLLFGE----HFGLSLSGLMTFGGIGGIAIGFASKDVLSNFFSGVMLFFERPFNIGDWINSPDR--KIEGVVKEIGWRSTKIMTFDNRPLYIPNALFSSISVENPGRMTNRRINTEIGLRYEDADKVNAVVNDIRTMLQQNPKIDLTQTLLVYFNAFGESSLNIMIYCFTKTVKWAEWLEAQQEVYLKIIEIVHKNGADFADTTQLLYLDNNEGA 277          
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Match: A0A162UYR3_9GAMM (Mechanosensitive ion channel protein MscS n=8 Tax=Wohlfahrtiimonas TaxID=582472 RepID=A0A162UYR3_9GAMM)

HSP 1 Score: 150 bits (380), Expect = 1.050e-37
Identity = 89/229 (38.86%), Postives = 125/229 (54.59%), Query Frame = 0
Query:  230 DKRKGFIYNRSLSVLTWSIFLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVARVVQSANATM---TSVLYV 455
            D     I NR L ++ + I +L   E    +  + ++  LAFGGIGG+AIG+AGKD+LSNFF G+ML    PF  GD V+     +  EG V  VGW  T++   D RP YVPN +FS   V N  R+T+R+ ++   LRY DA KV +I+  I+  L+  P ID      V+  +FA+S L I + C+  T  + E+L  QQ   LE+  +V    A     T  LY+
Sbjct:   94 DPTSARIINRVLKIIIFGIIVLMFGE----HFGLSLSGLLAFGGIGGIAIGMAGKDILSNFFSGIMLYFDRPFNIGDWVSSPDRQI--EGTVVEVGWRITKIMTFDHRPLYVPNAVFSAISVENPGRMTNRRIKTELGLRYDDADKVGDIVNDIRTMLQQHPKIDATQTLLVYFNEFADSSLNIMIYCFTKTTVWAEWLEAQQEVYLEMISIVHKHGADFAFPTQTLYM 316          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8R0_ECTSI1.510e-27088.13Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A4D9D8J2_9STRA4.330e-11251.93Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7UBI9_9STRA3.020e-11048.45Small-conductance mechanosensitive channel n=1 Tax... [more]
A0A6U0TNP3_9STRA1.800e-10549.17Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0SR49_9STRA3.140e-7949.43Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A6H5L1M0_9PHAE5.050e-7577.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZID6_9STRA2.110e-7150.18Mechanosensitive ion channel-domain-containing pro... [more]
A0A2U2AKE7_9GAMM9.440e-3937.29Mechanosensitive ion channel protein MscS n=2 Tax=... [more]
A0A2U2AKG0_9GAMM3.260e-3837.29Mechanosensitive ion channel protein MscS n=1 Tax=... [more]
A0A162UYR3_9GAMM1.050e-3738.86Mechanosensitive ion channel protein MscS n=8 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023408Mechanosensitive ion channel MscS domain superfamilyGENE3D2.30.30.60coord: 301..354
e-value: 3.9E-5
score: 25.3
IPR006685Mechanosensitive ion channel MscSPFAMPF00924MS_channelcoord: 250..447
e-value: 5.7E-35
score: 120.7
NoneNo IPR availablePANTHERPTHR30566YNAI-RELATED MECHANOSENSITIVE ION CHANNELcoord: 107..451
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..134
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 288..527
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 264..268
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 135..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..263
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 269..287
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.878
IPR011014Mechanosensitive ion channel MscS, transmembrane-2SUPERFAMILY82861Mechanosensitive channel protein MscS (YggB), transmembrane regioncoord: 203..283
IPR010920LSM domain superfamilySUPERFAMILY50182Sm-like ribonucleoproteinscoord: 285..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2923852..2929228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.619.1mRNA_C-linearis_contig10.619.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2923709..2929289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.619.1 ID=prot_C-linearis_contig10.619.1|Name=mRNA_C-linearis_contig10.619.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=528bp
MRRSLGSMLWIVAFSLFWTRGQGWITPAGSSRATTPPALRRVRGVNVLRP
GPVLDPSVRTSSDVPRRGAVRSRPATRLSMIRRGGAPAQLWTVAGIKAAG
AKVWGPLMNVVTPQKLFLFVLFQIVYARLLRLLYKLQLQVWRLVRKHDPQ
PYEHSVLGFLEPRLRMLSRILVVAYGLKSGVRVLIASGWNANPKLAKVLS
DVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSIFL
LTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAE
PFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTM
VTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFR
VHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVARVVQSANATMT
SVLYVDMNDPAPIGKAPLKGMINPAPAQAVPQSGLPQSVAAPQVFARGSD
TKLLEEQDAAVQINGVKKKNKTRGGAL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023408MscS_dom_sf
IPR006685MscS_channel
IPR011014MscS_channel_TM-2
IPR010920LSM_dom_sf