prot_C-linearis_contig10.611.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.611.1
Unique Nameprot_C-linearis_contig10.611.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length683
Homology
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BLAST of mRNA_C-linearis_contig10.611.1 vs. uniprot
Match: D7G8Q9_ECTSI (Ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q9_ECTSI)

HSP 1 Score: 544 bits (1401), Expect = 8.970e-183
Identity = 508/691 (73.52%), Postives = 536/691 (77.57%), Query Frame = 0 
Query:    1 MASYIVTGIHAAARAGKYGKVQDFIAKGGDVNKPDRENCSPLMWACWGGHVEIVKRLIDEGAKPDAFSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVGQSASQKNRGKSEDIKKLLKSKMPEDDDQGLDGSYHPESGGTLMGAAMSVAKNVASNTS-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATNGDTPRTDR-------GESNGGVEVAPLEVSPSDQAKATAKSDAPAPARKSSFLLNIGGKQSPERGVSDKRSFGAGGPAAVDRRASAGGGPSSRGSSPANATSGGSGPIGGERARKKSTINLMMADGMVSIGDGKVGNEASPSNKRRGSNFGGNNAPSAPVAASRVKRSPQGSVAGESSTKGSERDDMEEVSNEEVAYEMALEQIIADLDDLEERVENLNVDQKTNEDILLNVLKRVDETEKDLRKMKRSTIAKDFEAKQANPGGGLDRTIGSEAPLAATVVGTTEGSGADWAGNGIATNQFASKDELGELRQAMAMKDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRMEDAARKVSSGAG-CNCTVM 682
            MASYIVTG+HAAARAGK  KVQDFIAKGGDVNKPDRE+CSPLMWACWGGHVEIVKRL+DEGAKPD    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVGQSASQKNRGKSEDI KLLK+KMPEDDDQGLDGSYHPES GTLMGAAMSVAKNVAS+TS +                                ATNG++PR DR       G+SNG V+ AP E     Q K  AKSDAPAPARKSS L  +GG  + +                             RG+SPA A SG  G  GG+RARKKSTINL MADGMVSIGDGK GNEASP+NKRRGS +G    P+AP  ASRVKRSPQGSV GESSTKGSERDDMEEVSNEEVAYEMALEQIIADLDDLEERVENLNVDQKTNEDILLNVLKRVDETEKDLRKMKR+TIAKDFEAKQANP G LDRT+G+E PLA  + GTT  SGADW+GNGIA +QFASKDELGELRQA+AMKDKE                        XXXXXXXXXXX        SRMED ARKVS+ +G CNCT+M
Sbjct:    1 MASYIVTGVHAAARAGKLQKVQDFIAKGGDVNKPDREHCSPLMWACWGGHVEIVKRLLDEGAKPDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVGQSASQKNRGKSEDIIKLLKNKMPEDDDQGLDGSYHPESDGTLMGAAMSVAKNVASHTSTSSTTGEAAANTTPTAAADAVVDKAAVSTSGASKATNGESPRADRQETIPPSGDSNGLVDGAPPE-----QTKTAAKSDAPAPARKSSLLFGVGGGNAKQXXXXXXXXXXXXXXXXXXXX---------RGNSPAAAPSGAQGAGGGDRARKKSTINLTMADGMVSIGDGKPGNEASPTNKRRGSTYGMTTVPAAPAPASRVKRSPQGSVTGESSTKGSERDDMEEVSNEEVAYEMALEQIIADLDDLEERVENLNVDQKTNEDILLNVLKRVDETEKDLRKMKRTTIAKDFEAKQANPDGALDRTLGNEPPLAPNLGGTTAASGADWSGNGIAADQFASKDELGELRQAVAMKDKELRDIRDRMQDKEGELDTLRKAGKNXXXXXXXXXXXTRGIMDRLSRMEDTARKVSAASGGCNCTIM 677
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BLAST of mRNA_C-linearis_contig10.611.1 vs. uniprot
Match: A0A812UNP7_SYMPI (ANK2 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812UNP7_SYMPI)

HSP 1 Score: 59.3 bits (142), Expect = 2.910e-5
Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 0 
Query:   12 AARAGKYGKVQDFIAKGGDVNKPDRENCSPLMWACWGGHVEIVKRLIDEGAKPDA 66
            AAR GK G VQ  +  G + +  D +  +PL+ ACW GHV +V+ L+D GAKP A
Sbjct: 2734 AARLGKTGVVQALLEDGAEKDVEDHDGVTPLLKACWSGHVHVVRLLLDAGAKPAA 2788
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8Q9_ECTSI8.970e-18373.52Ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A812UNP7_SYMPI2.910e-547.27ANK2 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 605..653
NoneNo IPR availableCOILSCoilCoilcoord: 492..547
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 9..123
coord: 71..143
coord: 92..172
coord: 121..218
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 136..165
e-value: 9.6
score: 15.2
coord: 103..132
e-value: 0.031
score: 23.4
coord: 70..99
e-value: 0.0085
score: 25.3
coord: 169..198
e-value: 0.52
score: 19.3
coord: 4..33
e-value: 210.0
score: 10.1
coord: 37..66
e-value: 1.5E-5
score: 34.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 169..201
score: 12.155
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 70..102
score: 9.831
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 136..168
score: 9.538
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 103..135
score: 12.075
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 37..69
score: 10.125
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 141..218
e-value: 9.8E-17
score: 62.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 6..140
e-value: 1.9E-42
score: 146.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 6..211
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 141..229
e-value: 1.6E-9
score: 38.2
coord: 42..133
e-value: 4.2E-17
score: 62.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 7..209
score: 57.193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2869754..2878034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.611.1mRNA_C-linearis_contig10.611.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2868972..2878073 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.611.1 ID=prot_C-linearis_contig10.611.1|Name=mRNA_C-linearis_contig10.611.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=683bp
MASYIVTGIHAAARAGKYGKVQDFIAKGGDVNKPDRENCSPLMWACWGGH
VEIVKRLIDEGAKPDAFSHQHASALHWATWGGHTEIVRLLLEHKVLLDES
DEQDGTPLHYAAKKGFVGLAKVLVGAGATVDVRNAKNMAPLHLACHYNKV
EVARFLILKHAGVGTTDHINRTPLHYACLKSHINSVRVLLEWGAEVMVID
NKGKLPLHLVGQSASQKNRGKSEDIKKLLKSKMPEDDDQGLDGSYHPESG
GTLMGAAMSVAKNVASNTSAMSAAGGEAAKTTLASSAADTVDATTTANGA
AKATNGDTPRTDRGESNGGVEVAPLEVSPSDQAKATAKSDAPAPARKSSF
LLNIGGKQSPERGVSDKRSFGAGGPAAVDRRASAGGGPSSRGSSPANATS
GGSGPIGGERARKKSTINLMMADGMVSIGDGKVGNEASPSNKRRGSNFGG
NNAPSAPVAASRVKRSPQGSVAGESSTKGSERDDMEEVSNEEVAYEMALE
QIIADLDDLEERVENLNVDQKTNEDILLNVLKRVDETEKDLRKMKRSTIA
KDFEAKQANPGGGLDRTIGSEAPLAATVVGTTEGSGADWAGNGIATNQFA
SKDELGELRQAMAMKDKELRDLRDRMQDKEGELDTLRKAGKNLRERLDEK
EVETRGIMDRLSRMEDAARKVSSGAGCNCTVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom