prot_C-linearis_contig10.565.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.565.1
Unique Nameprot_C-linearis_contig10.565.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length393
Homology
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BLAST of mRNA_C-linearis_contig10.565.1 vs. uniprot
Match: A0A6H5K1S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S2_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 3.650e-35
Identity = 119/353 (33.71%), Postives = 171/353 (48.44%), Query Frame = 0 
Query:    4 EQWESAKSSPEFWLPITSSLARFRRKDKFSLKTMERYLKHVSVPALCWAEIRSQAGLRHLDLSDNLTDQEYDRIIETFRLLSDNA-----HNQAQGGLSREEERRRSLALHSALPTPYLVVTNLPADVTREELFEAFRPDAEISDPVLMET------GGGSVETRRSHDDPHRXXXREQRAGGVVWLLSYRSDEEARRFRDRWDGQELRWRQPQQGLNQEQQQPERLAVRFSL-------GLNRGCIWIQPREQQQRQQHLGFQALVDFAQRRLPEDSTVRPVFAGPDRLSVSSVLLTFSSHEACRHAIEDLWQGRDPHSGNGEGGGGWRRRRGREEAGVGFVCGTECSIFFA 338
            E WE+ K+S +FW  I + L  F R    ++ +++++L    +P  CWAE+  +AGL H    D L+  E+ RI+ET  L   NA      ++A+     E     SL+L S+ PTP+L+VT+LPADVT  E+  AFRPDA + D V+ E       GG    ++  +  P               +LS++S+E AR  RD WDG  LR              P+ + V   +       G    CIWI     +Q    L    L+D+A R  P D+ +RPVF+     SV SV LTF S  + R AIE L +G  P     +         GR + GVG++ GT CS+ F+
Sbjct:  532 EAWETLKNSLDFWEWIIARLMGFPRPQTSTVTSVDQFLG--GLPVQCWAEVMERAGLSHRTKEDVLSPTEFQRIVETI-LCHRNAAFCHHRDKAKRHAGHENFLGISLSLISSTPTPFLMVTDLPADVTHAEMITAFRPDARVPDRVMFEDIDIPVRGGVLAGSKAKNVMPQ-----------TAAILSFQSEETARLMRDMWDGGVLR--------------PQHVCVLGGMMLPAVGAGTFFSCIWIGAFSGKQ----LSAIELMDYATRTWPPDTLMRPVFSEAPS-SVESVHLTFPSCLSARDAIEGL-RGNQPGKQLPDA----EASDGRADGGVGYIAGTSCSVLFS 846
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1S2_9PHAE3.650e-3533.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2440875..2444426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.565.1mRNA_C-linearis_contig10.565.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2440844..2444426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.565.1 ID=prot_C-linearis_contig10.565.1|Name=mRNA_C-linearis_contig10.565.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=393bp
MSPEQWESAKSSPEFWLPITSSLARFRRKDKFSLKTMERYLKHVSVPALC
WAEIRSQAGLRHLDLSDNLTDQEYDRIIETFRLLSDNAHNQAQGGLSREE
ERRRSLALHSALPTPYLVVTNLPADVTREELFEAFRPDAEISDPVLMETG
GGSVETRRSHDDPHRRHHREQRAGGVVWLLSYRSDEEARRFRDRWDGQEL
RWRQPQQGLNQEQQQPERLAVRFSLGLNRGCIWIQPREQQQRQQHLGFQA
LVDFAQRRLPEDSTVRPVFAGPDRLSVSSVLLTFSSHEACRHAIEDLWQG
RDPHSGNGEGGGGWRRRRGREEAGVGFVCGTECSIFFASSVETATASASA
SPSTGRGDSYPAHELIRARIFSDPSVSAVSSPPAVAAAGTEQA
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