prot_C-linearis_contig10.564.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.564.1
Unique Nameprot_C-linearis_contig10.564.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length895
Homology
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BLAST of mRNA_C-linearis_contig10.564.1 vs. uniprot
Match: A0A6H5K1S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S2_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 9.030e-22
Identity = 101/229 (44.10%), Postives = 120/229 (52.40%), Query Frame = 0 
Query:   56 KADAALLELLGEDMKVLSEMGKPRQEAGEGVPREHSQRFQRAFQRTLDVLTKARRGPRVEEVVCAACDIIDRHLTWFAGAELEAAAALASVLRTESDVGKAKAAATLRA---AGAGGEREAAAVDLRAALGAQ----LPLPALIAAAQSLRKIGGI------DARGVGSMAAGGEATGGRGVIAGG-GMGQPSVARLARYLTRQGDKFRAKTSHPVIERILDALVSELR 270
            +A AAL   L EDM  L EMG PR    E  P++  +    AFQ  L VL K RRGP++EE +  AC  +DRHL  F GAELEAAAAL S+L TES    AKA A   A   A AGG                    LPL  L+AA +SLR +           R   +          RG ++   G G PS +RL RYLTR+ DK R  TSHPV+ER LDAL+SELR
Sbjct:   35 EAGAALASRLREDMASLLEMGPPRP-GQELAPKKQRE----AFQHALAVLAKVRRGPQLEEALLLACTTVDRHLVRFVGAELEAAAALLSILATESSARCAKAMAAKVAYEMAQAGGXXXXXXXXXXXXXXXXXXXXLPLSVLVAAVRSLRTLSASAVAIEKSVRISSACPTXXXXXXXRGPVSVRLGPGGPSASRLVRYLTRECDKVRGITSHPVVERNLDALMSELR 258
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1S2_9PHAE9.030e-2244.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2431003..2440166 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.564.1mRNA_C-linearis_contig10.564.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2430393..2440166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.564.1 ID=prot_C-linearis_contig10.564.1|Name=mRNA_C-linearis_contig10.564.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=895bp
MTLPEREAGFIVPTTAASAAAVVGEGGEQRGGSCGSSSSSSSSSTILSDS
SGWDVKADAALLELLGEDMKVLSEMGKPRQEAGEGVPREHSQRFQRAFQR
TLDVLTKARRGPRVEEVVCAACDIIDRHLTWFAGAELEAAAALASVLRTE
SDVGKAKAAATLRAAGAGGEREAAAVDLRAALGAQLPLPALIAAAQSLRK
IGGIDARGVGSMAAGGEATGGRGVIAGGGMGQPSVARLARYLTRQGDKFR
AKTSHPVIERILDALVSELREGCPSRAPVMTVGAEAAVAAATAANAAANA
AAAPGAACASDVAAAGSAAGAADTAAAAAAAAPPSPASSTQGRCVKEVAS
GRPAMPAAAAAVATAAETPAAAVTPPHPPPTVSGRPLVAPFVPGFQGVTP
SANHLQPWQQHQHLQSTPTVESDGRGMPEKSPCSSEGHELPAAAAAAAAS
GGSAVAGPAGAAPVAQAAPSMATGGGATDSAALLARGQQHRRASLSPVTA
STVDVPARSLAAPASTAPRAVPLSSFNAVHPCTPAGAAWGRDVKLRVWSG
GGTVGQANGGEKLAAAPGGRSLGAAPEAERPPLPLRATALVQPCVGVIGG
DGGNGGSQVQIGSVPWQMPTTTTTTTTTPTTASGPQAALSPRAAGVLPQA
GGAGGIGGDSSGKGHLSNGGGSWHSPSQATGKGGANLLPSVGGLWLPVGA
SRAVESRLPRHGARLQDGGGSGGYGANGGTLWQPQGNPGHAVGAVLPWQR
SDFGQAGSGAIGVIAKGLGAGESRSSGSAWGDTFLGAESELPPQGVGMLQ
DSGDGRGSGSSGAVPNGVVSPQLRPGEAEAEETCGSTETSPGKATTANGP
SAVPSGSPGGSPGIDATASGNGGGAFSGQPLVGGDQETEAEAGGG
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