Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 153 |
| Cds size | 153 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930845.6860688-CDS-C-linearis_contig99:592023..592114 | 1622930845.6860688-CDS-C-linearis_contig99:592023..592114 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 592024..592114 + |
| 1690881279.515132-CDS-C-linearis_contig99:592023..592114 | 1690881279.515132-CDS-C-linearis_contig99:592023..592114 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 592024..592114 + |
| 1622930845.7053664-CDS-C-linearis_contig99:592618..592680 | 1622930845.7053664-CDS-C-linearis_contig99:592618..592680 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 592619..592680 + |
| 1690881279.5282264-CDS-C-linearis_contig99:592618..592680 | 1690881279.5282264-CDS-C-linearis_contig99:592618..592680 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig99 592619..592680 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17196.1 >prot_C-linearis_contig99.17196.1 ID=prot_C-linearis_contig99.17196.1|Name=mRNA_C-linearis_contig99.17196.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=51bp
RLPQPASPQLPPGQEPGRKPRLRRKGCHQGHRQGVFHVRARVAHHRQGRH
R back to topmRNA from alignment at C-linearis_contig99:592024..592680+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig99.17196.1 ID=mRNA_C-linearis_contig99.17196.1|Name=mRNA_C-linearis_contig99.17196.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=657bp|location=Sequence derived from alignment at C-linearis_contig99:592024..592680+ (Chordaria linearis ClinC8C monoicous)
AGACTACCACAACCAGCATCTCCGCAACTGCCTCCTGGACAAGAACCCGG
ACGGAAACCTCGCCTTCGCCGTAAAGGCTGCCACCAAGGACGTGAGTTGG
CATGAATGCCTGTGTCAAGAATCTTCGGTATTTTATCGTCTAAACCATTG
CTACGCTAGAACGCACTTATTCTCTTAGTTCAGACACACACTAAGACCAG
GATACTATCGTTCAGTCCTGCTATGTTCGCAGTGTTATGCACGCTGTTTT
ATGAAAGAGCGGAGCTTTTGGCCGCTTTGACGAGGGACCACAGCAGCGTG
AACTGGCACGAATATTTGTGTCACAAGGTTTTTTTCTGAACGTCTTCCCT
GTTTTATGAAGGGCGTTTCCCGTCACTCGCGGTCTTACCAAGCATCGATG
ATGTGCTGTAACTTCGCACTACTTTAGAAATGACCTCTATTACAGACAAC
AGCATCTCCTTTGTTTGTGTTTTCGCTGCAGTCTACAGCCAACCCCATAC
AAGTTCTGTACTGCTGTGCACGAGCGATGACTCGATTTTTGTCGCTGATG
GCTGTTTTGTTCCTGTCCATATGGTTTTTGCACACTTTTCGGCAGATCGA
CAGGGAGTGTTCCACGTGCGTGCAAGAGTCGCCCATCATCGTCAAGGGCG
ACATCGT back to topCoding sequence (CDS) from alignment at C-linearis_contig99:592024..592680+ >mRNA_C-linearis_contig99.17196.1 ID=mRNA_C-linearis_contig99.17196.1|Name=mRNA_C-linearis_contig99.17196.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=306bp|location=Sequence derived from alignment at C-linearis_contig99:592024..592680+ (Chordaria linearis ClinC8C monoicous)
AGACTACCACAACCAGCATCTCCGCAACTGCCTCCTGGACAAGAACCCGG
ACGGAAACCTCGCCTTCGCCGTAAAGGCTGCCACCAAGGACAGACTACCA
CAACCAGCATCTCCGCAACTGCCTCCTGGACAAGAACCCGGACGGAAACC
TCGCCTTCGCCGTAAAGGCTGCCACCAAGGACATCGACAGGGAGTGTTCC
ACGTGCGTGCAAGAGTCGCCCATCATCGTCAAGGGCGACATCGTATCGAC
AGGGAGTGTTCCACGTGCGTGCAAGAGTCGCCCATCATCGTCAAGGGCGA
CATCGT back to top
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