mRNA_C-linearis_contig99.17194.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Match: A0A6H5JCW1_9PHAE (ACPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW1_9PHAE) HSP 1 Score: 499 bits (1286), Expect = 9.240e-169 Identity = 271/444 (61.04%), Postives = 309/444 (69.59%), Query Frame = 2 Query: 323 PEDQVAGRALLASGVQRWCLDVSEWGELSTDQWEVLLGLLPEADSTRVTAFLRENDRKLALGSRLLQRAVVSKVFGLRFSDVDISRTSESKPFFAGVKRAVEDGSVSPLLKNWNFNVSHHGKYVVIASEPACLCGVDIVDTNGRADDKGPAEDYLRYFTDHFTGDEWETIKRPADDRNKLQRFYLHWGLKEAYVKAIGQGLGYDLRRISFVAGDWVDCCATRHQQPQQQGR--------SSSPTLPGTEENNGDSNVDHPLHRC--------------------------SCS----------RSLAAVAAAAGLQANG----SSGTGSV--DGGSADAAGVGSSRGQEDRLGCECGMGLVAAEVDRVPRPDWSFKVFPFPDGYAACVARGPPSACSRSGREAGVISDPDASERGQSLPQLRFRRVRLEEIVPRDVAARMFGGG 1504
PE + A R++L SGVQRWCLDVSEWG LS DQW+ LLGLLP A+S RV AFLRENDRKLALGSRLLQRA+VSKVFGL F ++DI RT+ESKPFFAGV +A++DGSVSPLLKNWNFNVSHHGKYV +ASEPACLCGVD+VDTN RA+++GPAEDYL+YFT HFT DEW TIK PADD KL+RFY+HWGLKEAYVKAIGQGLGYDLRR+SF+ GDWVDC ++ + R + P PG ++ G VD SC + + A A + NG S G S D G+A+ G GQEDRLGC CGMG V +VD V RPDWSFKVF PDGYAACVARGPPSACS SG+EAGVISD ASERGQSLPQLRFR+V LEEIVP + AAR+FG G
Sbjct: 62 PESRAA-RSVLLSGVQRWCLDVSEWG-LSADQWDGLLGLLPNAESARVRAFLRENDRKLALGSRLLQRALVSKVFGLEFDEIDIRRTAESKPFFAGVVKAIDDGSVSPLLKNWNFNVSHHGKYVAVASEPACLCGVDVVDTNRRANEQGPAEDYLQYFTGHFTDDEWTTIKSPADDVEKLRRFYIHWGLKEAYVKAIGQGLGYDLRRVSFLPGDWVDCWFCLQEKQRWPRRCPCPRSLAALDPATPGGQQVGGCGTVDGTXXXXXXXXXXXXXXXXXXXXXXXXVGGVDRSCGGDSKVNNAEGKGIEAEKVRANRRNNGDVVASEGRASTGADAGAAEGR-RGGFWGQEDRLGCACGMGAVTVKVDNVLRPDWSFKVFSLPDGYAACVARGPPSACSPSGQEAGVISDAHASERGQSLPQLRFRKVGLEEIVPPEAAARLFGEG 502
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Match: D8LR25_ECTSI (4\'-phosphopantetheinyl transferase superfamily protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR25_ECTSI) HSP 1 Score: 373 bits (958), Expect = 1.990e-120 Identity = 193/281 (68.68%), Postives = 216/281 (76.87%), Query Frame = 2 Query: 338 AGRALLASGVQRWCLDVSEWGELSTDQWEVLLGLLPEADSTRVTAFLRENDRKLALGSRLLQRAVVSKVFGLRFSDVDISRTSESKPFFAGVKRAVEDGSVSPLLKNWNFNVSHHGKYVVIASEPACLCGVDIVDTNGRADDKGPAEDYLRYFTDHFTGDEWETIKRPADDRNKLQRFYLHWGLKEAYVKAIGQGLGYDLRRISFVAGDWVDCCATRHQQPQQQGRSSSPTLPGTEENNGDSNVDHPLHRCSCSRSLAAV--AAAAGLQANGSSGTGSVDG 1174
A R++L SGVQRWCLDVSEW ELS DQW+ LLGLLP +S RV AFLRENDRKLALGSRLLQRAVVSKVFGL F ++DI RTSESKPFFAGV +A+ DGSVSPLLKNWNFNVSHHGKYV IASEPACLCGVD+VDTN RA+++GPAEDYL+YFT HFT DEW TIK PADD KL+RFYLHWGLKEAYVKAIGQGLGYDLRR+SF+ GDWVDC + Q+ Q++ R RC C RSLAA+ A + G Q G G+VDG
Sbjct: 68 AARSVLLSGVQRWCLDVSEW-ELSADQWDGLLGLLPNTESARVRAFLRENDRKLALGSRLLQRAVVSKVFGLEFHEIDIRRTSESKPFFAGVVKAINDGSVSPLLKNWNFNVSHHGKYVAIASEPACLCGVDVVDTNRRANEQGPAEDYLQYFTGHFTDDEWTTIKSPADDMKKLRRFYLHWGLKEAYVKAIGQGLGYDLRRVSFLPGDWVDCWFSL-QEKQRRPR-----------------------RCPCPRSLAALDPATSGGQQVGG---CGAVDG 320
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Match: A0A251UBQ3_HELAN (Putative 4'-phosphopantetheinyl transferase superfamily n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UBQ3_HELAN) HSP 1 Score: 172 bits (436), Expect = 3.230e-45 Identity = 88/205 (42.93%), Postives = 122/205 (59.51%), Query Frame = 2 Query: 365 VQRWCLDVSEWGELSTDQWEVLLGLLPEADSTRVTAFLRENDRKLALGSRLLQRAVVSKVFGLRFSDVDISRTSESKPFFAGVKRAVEDGSVSPLLKNWNFNVSHHGKYVVIASEPACLCGVDIVDTNGRADDKGPAEDYLRYFTDHFTGDEWETIKRPADDRNKLQRFYLHWGLKEAYVKAIGQGLGYDLRRISFVAGDWVDCC 979
VQRW ++ SEW + W + + +LP+ + + +T F++ DRK AL SRLLQ A+V +V GL F ++ I+RT E KP+ + ++ N+NFNVSHHG YV IASEP CL G+DIV K A D++R F+ +F+ EWE I D N L F+ +W LKEA+VKA+G G+GY L + F DW D C
Sbjct: 32 VQRWLVNASEWDPSPNEFW-IAMSVLPQHEHSSITRFVKIEDRKRALVSRLLQYALVHQVVGLPFDEIVINRTPEGKPYL--------EKHLNVKFPNFNFNVSHHGDYVAIASEPICLVGLDIVSC--FIPGKESASDFIRNFSSYFSSSEWEKIVNAGSDDNVLDTFFRYWCLKEAFVKALGTGVGYKLDYVEFHHKDWTDIC 225
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Match: A0A0D2S9T3_GOSRA (ACPS domain-containing protein n=22 Tax=Gossypium TaxID=3633 RepID=A0A0D2S9T3_GOSRA) HSP 1 Score: 168 bits (425), Expect = 6.300e-44 Identity = 87/206 (42.23%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 353 LASGVQRWCLDVSEWGELSTDQWEVLLGLLPEADSTRVTAFLRENDRKLALGSRLLQRAVVSKVFGLRFSDVDISRTSESKPFFAGVKRAVEDGSVSPLLKNWNFNVSHHGKYVVIASEPACLCGVDIVDTNGRADDKGPAEDYLRYFTDHFTGDEWETIKRPADDRNKLQRFYLHWGLKEAYVKAIGQGLGYDLRRISFVAGDWV 970
+ GVQRW +D+S+W S D + L LLP+ + +T F++ DRK AL S LLQ +V +V G+ + D+ I+RT E KPF + E N+NFNVSHHG YV IASEP CL G+DIV N +K +Y++ F+ +F+ EW+ I ++ L FY +W LKEAYVKAIG GL Y L ++ F +W
Sbjct: 1 MEKGVQRWIVDISKWNPSSND-FSFALSLLPQTHHSSITRFVKMEDRKRALVSLLLQYTLVHEVLGIPYPDIVINRTLEGKPFLECARFCFE-------FPNFNFNVSHHGDYVAIASEPLCLVGLDIV--NFMIPEKETVPEYIQNFSSYFSSSEWDRIISVGNNEEVLAEFYRYWCLKEAYVKAIGSGLAYGLHKVEFHHTNWT 196
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Match: A0A022RAB2_ERYGU (ACPS domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RAB2_ERYGU) HSP 1 Score: 167 bits (424), Expect = 1.350e-43 Identity = 85/205 (41.46%), Postives = 125/205 (60.98%), Query Frame = 2 Query: 353 LASGVQRWCLDVSEWGELSTDQWEVLLGLLPEADSTRVTAFLRENDRKLALGSRLLQRAVVSKVFGLRFSDVDISRTSESKPFFAGVKRAVEDGSVSPLLKNWNFNVSHHGKYVVIASEPACLCGVDIVDTNGRADDKGPAEDYLRYFTDHFTGDEWETIKRPADDRNKLQRFYLHWGLKEAYVKAIGQGLGYDLRRISFVAGDW 967
+ GV+RW +D+S+W ST+ + +++ LLP D + +T F++ DRK AL SRLLQ +V++V G+ F D+ I RT E KPF K +E N+NFNVSHHG YV IASEP C+ G+DIV + ++ A+ +++ F+ +F+ EW I A L+ FY +W LKEA+VKA+G G+GY L + F +W
Sbjct: 3 VGKGVERWVVDISKWRP-STEDFSLIISLLPHCDHSSITRFVKLEDRKRALVSRLLQYVLVNRVLGIPFDDIVIRRTPEGKPFLVCDKSKME-------FPNFNFNVSHHGDYVAIASEPICIVGLDIVSHSAPVNET--AQQFVQSFSTYFSRLEWCHISNAASSDEMLKTFYRYWCLKEAFVKAVGSGVGYKLDDVEFRHTNW 197
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Match: A0A822ZIG6_NELNU (ACPS domain-containing protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822ZIG6_NELNU) HSP 1 Score: 166 bits (421), Expect = 2.200e-43 Identity = 89/207 (43.00%), Postives = 124/207 (59.90%), Query Frame = 2 Query: 353 LASGVQRWCLDVSEWGELSTDQWEVLLGLLPEADSTRVTAFLRENDRKLALGSRLLQRAVVSKVFGLRFSDVDISRTSESKPFFAGVKRAVEDGSVSPLLKNWNFNVSHHGKYVVIASEPACLCGVDIVDTNGRADDKGPAEDYLRYFTDHFTGDEWETIKRPADDRNKLQRFYLHWGLKEAYVKAIGQGLGYDLRRISFVAGDWVD 973
+ GVQRW ++VSEW S D++ LL LLP + + +T F++ DRK AL SRLLQ A+V +V G+ F ++ I RT E KP+ K+ +E N+NFN SHHG YV IASEP CL G+DIV + D++ F+ + TG EWE I + + L +FY +W LKEA+VKAIG G+GY L ++ F +W +
Sbjct: 1 MEKGVQRWFVNVSEWSP-SGDEFYFLLSLLPPHEHSAITRFVKLEDRKRALVSRLLQYALVHEVLGIPFDEIIIKRTVEGKPYLEYNKQNLE-------FPNFNFNASHHGDYVAIASEPLCLVGLDIVSL--LIPKQETTHDFIGNFSSYLTGLEWENIIKAGTSDDILGQFYRYWCLKEAFVKAIGAGMGYGLDKLEFHHNNWTN 197
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Match: UPI000276A0DD (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like isoform X2 n=2 Tax=Solanum subgen. Lycopersicon TaxID=49274 RepID=UPI000276A0DD) HSP 1 Score: 164 bits (416), Expect = 2.810e-43 Identity = 81/205 (39.51%), Postives = 122/205 (59.51%), Query Frame = 2 Query: 353 LASGVQRWCLDVSEWGELSTDQWEVLLGLLPEADSTRVTAFLRENDRKLALGSRLLQRAVVSKVFGLRFSDVDISRTSESKPFFAGVKRAVEDGSVSPLLKNWNFNVSHHGKYVVIASEPACLCGVDIVDTNGRADDKGPAEDYLRYFTDHFTGDEWETIKRPADDRNKLQRFYLHWGLKEAYVKAIGQGLGYDLRRISFVAGDW 967
L GV RW +D+SEW S + + + LP+ + + +T F + DRK AL SRLLQ A++ +V G+ ++ + I RT+E KP+ ++R+ E ++ N+NFN SHHG +V IASEP CL G+D+V +K E++++ F+ +F+ EW I R L FY +W +KEA+VKAIG G+GY L I F +W
Sbjct: 3 LEKGVHRWIVDISEWNP-SPNYFSFAMSFLPQHEHSSITRFFQMEDRKRALVSRLLQYALIHQVLGIPYNGIVIRRTAEGKPYLLCLERSQECDKLNLEFPNFNFNASHHGDFVAIASEPICLVGLDVVSQT--IPEKESVEEFIQSFSSYFSSLEWFNIINAGSSRQILSEFYRYWSVKEAFVKAIGDGVGYKLDTIEFHHKNW 204
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Match: D0NCV0_PHYIT (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NCV0_PHYIT) HSP 1 Score: 164 bits (414), Expect = 2.900e-43 Identity = 83/191 (43.46%), Postives = 117/191 (61.26%), Query Frame = 2 Query: 380 LDVSEWGELSTDQWEVLLGLLPEADSTRVTAFLRENDRKLALGSRLLQRAVVSKVFGLRFSDVDISRTSESKPFFAGVKRAVEDGSVSPLLKNWNFNVSHHGKYVVIASEPACLCGVDIVDTNGRADDKGPAEDYLRYFTDHFTGDEWETIKRPADDRNKLQRFYLHWGLKEAYVKAIGQGLGYDLRRISF 952
+DV+ W +L++ +W LL LP+ + +VT F+ D+KLAL SRLLQR ++ ++FG+ + +DI+RT E+KP++ + +P +WNFNVSHHG V IAS+ L GVD+V R K ED+ R FT HF EWE I+ D+ + RFY W LKEAY+KA+G GLG+ L R F
Sbjct: 7 VDVTAW-DLTSSEWRRLLLQLPDHEQKQVTRFMFAKDQKLALASRLLQRQLIHELFGVEYDTIDIARTPENKPYWNRLPG-------NPAPSSWNFNVSHHGTIVTIASDARSLVGVDVVRLTDRPHRKTSIEDFFRAFTGHFNPGEWEYIRGAEDEDRQYIRFYKLWSLKEAYIKAVGIGLGFSLLRAEF 189
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Match: A0A6I9TGS1_SESIN (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TGS1_SESIN) HSP 1 Score: 166 bits (419), Expect = 4.000e-43 Identity = 87/207 (42.03%), Postives = 120/207 (57.97%), Query Frame = 2 Query: 353 LASGVQRWCLDVSEWGELSTDQWEVLLGLLPEADSTRVTAFLRENDRKLALGSRLLQRAVVSKVFGLRFSDVDISRTSESKPFFAGVKRAVEDGSVSPLLKNWNFNVSHHGKYVVIASEPACLCGVDIVDTNGRADDKGPAEDYLRYFTDHFTGDEWETIKRPADDRNKLQRFYLHWGLKEAYVKAIGQGLGYDLRRISFVAGDWVD 973
L GVQRW +D++EW E S+D + + LP + +T F++ DRK AL SRLLQ A+V +V G+ F D+ I RT E KPF G +V N+NFN SHHG YV IASEP CL GVDIV + ++ A+ +++ F+ +F+ EW I L+ FY +W LKE++VKA+G G+GY L + F W D
Sbjct: 3 LEKGVQRWVVDIAEW-EPSSDDFSQAMAFLPHHEYASITRFVKLEDRKRALVSRLLQYALVHQVLGITFDDIVIRRTPEGKPFLVGE-------NVKLGFPNFNFNASHHGDYVAIASEPICLVGVDIVSHSIPVNET--ADKFIQSFSSYFSSLEWYCILNAGSSDEMLKTFYRYWSLKESFVKAMGSGVGYKLDEVEFHHKSWDD 199
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Match: A0A833T409_PHYIN (4'-phosphopantetheinyl transferase domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T409_PHYIN) HSP 1 Score: 165 bits (417), Expect = 6.870e-43 Identity = 84/192 (43.75%), Postives = 117/192 (60.94%), Query Frame = 2 Query: 380 LDVSEWGELSTDQWEVLLGLLPEADSTRVTAFLRENDRKLALGSRLLQRAVVSKVFGLRFSDVDISRTSESKPFFAGVKRAVEDGSVSPLLKNWNFNVSHHGKYVVIASEPACLCGVDIVDTNGRADDKGPAEDYLRYFTDHFTGDEWETIKRPADDRNKLQRFYLHWGLKEAYVKAIGQGLGYDLRRISFV 955
+DV+ W +L++ +W LL LP+ + +VT F+ D+KLAL SRLLQR ++ ++FG+ + +DI+RT E+KP++ +P +WNFNVSHHG V IAS+ L GVD+V R K ED+ R FT HF EWE I+ D+ + RFY W LKEAY+KA+G GLG+ L R FV
Sbjct: 7 VDVTAW-DLTSSEWRRLLLQLPDHEQKQVTRFMFAKDQKLALASRLLQRQLIHELFGVEYDTIDIARTPENKPYW-------NRPPGNPAPSSWNFNVSHHGTIVTIASDARSLVGVDVVRLTDRPHRKTSIEDFFRAFTGHFNPGEWEYIRGAEDEDRQYIRFYKLWSLKEAYIKAVGIGLGFSLLRAEFV 190 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17194.1 >prot_C-linearis_contig99.17194.1 ID=prot_C-linearis_contig99.17194.1|Name=mRNA_C-linearis_contig99.17194.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=452bp MGTCPSAHSAVERGSPGGGGHSQAAPAYGKGRVMTREETGRKGPTNGGSNback to top mRNA from alignment at C-linearis_contig99:490918..495804- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig99.17194.1 ID=mRNA_C-linearis_contig99.17194.1|Name=mRNA_C-linearis_contig99.17194.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4887bp|location=Sequence derived from alignment at C-linearis_contig99:490918..495804- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig99:490918..495804- >mRNA_C-linearis_contig99.17194.1 ID=mRNA_C-linearis_contig99.17194.1|Name=mRNA_C-linearis_contig99.17194.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2712bp|location=Sequence derived from alignment at C-linearis_contig99:490918..495804- (Chordaria linearis ClinC8C monoicous)back to top |