mRNA_C-linearis_contig99.17182.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 206 bits (523), Expect = 9.060e-55 Identity = 208/429 (48.48%), Postives = 257/429 (59.91%), Query Frame = 2 Query: 146 PCNKLHMAAMIGSLTSTKVILSSGSISVNQVDPDGWTSVMVAAERGFHRIVRYLMDNGADISISVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-TNADPQLARAISTWERG-IPLDVAAQGGHAEVVLEFIKQVGVRACGGTSHGVEAFRLAARFRHLGIMVMLADAGVVDTGPALTCAAAYGSEAELKFLLQQQEPTP-----AYLNTRDHTNRTPAYCSVSFCSPSSPRVLRSLIEAGADVASDVDVFDGMWNVVSTYTPLSLTNHNLREK-KVKGER-ATEAQLYRLEAMRRLLLQVDAVHAVSWLWPS----AARVAALGAEGTGKVETAPAQLTQTLPTL--RRRAVRCGVCLAAVLRYSRK 1387 P N+LH AA GS +T +L+SG+ ++Q + GWT++M+A+ G+ RIV +++ GA +SI+ XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX ADP L R +PLD AA+ GH EVV E I+QVG+ CGG+S GV A + AA+F++L IMV+L +AGVVDTG AL AA YG E LKFLL+Q AY+NTRD TP + PRV+R L+EAGAD S V V + + + TPL LT + +R+K KV G A+ QL++LEA+RRLLL+V+AVHAVSWLWPS R AA G + T + TA TLP L RRRA V LAA+LRYS K Sbjct: 14 PSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHY---RPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAV-----TLPMLVTRRRARGRKVPLAALLRYSSK 434
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 187 bits (474), Expect = 3.630e-48 Identity = 194/425 (45.65%), Postives = 245/425 (57.65%), Query Frame = 2 Query: 152 NKLHMAAMIGSLTSTKVILSSGSISVNQVDPDGWTSVMVAAERGFHRIVRYLMDNGADISISV-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNADPQLARA-ISTWERGIPLDVAAQGGHAEVVLEFIKQVGVRACGGTSHGVEAFRLAARFRHLGIMVMLADAGVVDTGPALTCAAAYGSEAELKFLLQQQEP---TPAYLNTRDHTNRTPAYCSVSFCS----PSSPRVLRSLIEAGADVASDVDVFDGMWNVVSTYTPLSLTNHNLREKKVKGERATEAQLYRLEAMRRLLLQVDAVHAVSWLWPSAA----RVAALGAEGTGKVETAPAQLTQTLPTLRRRAVRCGVCLAAVLRYSRK 1387 N LH AA GS T +L++GS +NQ + WT ++ AA G ++ L+ GA++SI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R NA+P + RA + T +PLD AA+ G+ V+ E I++VG+ CGG S G A +A R + M +L AGVVDTG ALT +A G EA +K+LLQ AY+N RD TP S+ C S PRV R L+EAGAD +++ + M V+ + TPL LT H L++KKV G ++ +L+RLE +RRLLLQV+AVHA SWLWPS++ R AE T A +L + LP LRRRA R GV A+ R+ RK Sbjct: 2 NSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLPTL---LPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRK 423
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 187 bits (476), Expect = 1.700e-47 Identity = 163/433 (37.64%), Postives = 214/433 (49.42%), Query Frame = 2 Query: 137 VADP--CNKLHMAAMIGSLTSTKVILSSGSISVNQVDPDGWTSVMVAAERGFHRIVRYLMDNGADISISVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RTNADPQLARAISTWERG----IPLDVAAQGGHAEVVLEFIKQVGVRACGGTSHGVEAFRLAARFRHLGIMVMLADAGVVDTGPALTCAAAYGSEAELKFLLQQQEPTP------AYLNTRDHTNRTPAYCSVSFCSPSSPRVLRSLIEAGADVASDVDVFDGMWNVVSTYTPLSLTNHNLREKKVK-GERATEAQLYRLEAMRRLLLQVDAVHAVSWLWPSAARVAALGAEGTGKVETAPAQLTQTLPTLRRRAVR-CGVCLAAVLRYSRK 1387 VA+P N+LH A ++GS T+ +L+ G++ ++Q + G T +M+A G RI + L+ GA++SI+ + XXXXXXXXXXXXX R NA+P L I T G +PLD+AA+ GH +VV E I+++G+ C TS G A AA +HL IM +L +AGVVDTG AL AA G EA +KFLL+ + AYLN RD TP C +PR++R L++AGAD S V V + VV TPL+ T LR+K V G+ AT+ L RLEA+ RLLL+VDAVHAVSWLWPS A E T PA L LP L+RR R CG+ +A +LRYS K Sbjct: 100 VANPHELNQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLL---IQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATE-TDPEPPLPA-LKLMLPILKRRTKRRCGL-VATLLRYSVK 526
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 183 bits (465), Expect = 8.480e-47 Identity = 208/439 (47.38%), Postives = 256/439 (58.31%), Query Frame = 2 Query: 107 MSALPVASTWVADPCNKLHMAAMIGSLTSTKVILSSGSISVNQVDPDGWTSVMVAAERGFHRIVRYLMDNGADISISVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNADPQLARAISTWERGIPLDVAAQGGHAEVVLEFIKQVGVRACGGTSHGVEAFRLAARFRHLGIMVMLADAGVVDTGPALTCAAAYGSEAELKFLLQQQEPTPAYL--NTRDHTNRTPAYCSVSFCSPSSPRVLRSLIEAGADVASDVDVF-DGMWNVVSTYTPLSLTNHNLREKKVKGERATEAQLYRLEAMRRLLLQVDAVHAVSWLWPSAARVA--ALGAEGTG-KVETAPAQLTQTLPTLRRRAVRCGVCLAAVLRYSRK*PGSAR 1405 M A+ + W P N+LH AA GS +LS+GS+ +NQ +P GWT +M+A E+G + + L++ GA++S++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + Q GH+EVV E I+Q+GVR CGG S GVE+ RLAA +++ IM +L GVVDTG AL AA Y E +KFLLQ Q + NT D RTP C++ C SSPR+ R LI+ GAD S V V G W S TPL +LR+ KV G+ ATE QL L+A+ RLL Q++AVHAVSWLW S+ A+GA + K TA L + LR + GV L AV R + + AR Sbjct: 19 MLAVSTSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVA----------------------GDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQKQHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTT-SRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEELVRGAR 434
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 181 bits (459), Expect = 3.200e-46 Identity = 228/407 (56.02%), Postives = 268/407 (65.85%), Query Frame = 2 Query: 179 GSLTSTKVILSSGSISVNQVDPDGWTSVMVAAERGFHRIVRYLMDNGADISISVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNADPQLARAIS-TWERGIPLDVAAQGGHAEVVLEFIKQVGVRACGGTSHGVEAFRLAARFRHLGIMVMLADAGVVDTGPALTCAAAYGSEAELKFLLQQQEPTPAYL--NTRDHTNRTPAYCSVSFCSPSSPRVLRSLIEAGADVASDVDVF-DGMWNVVSTYTPLSLTNHNLREKKVKGERATEAQLYRLEAMRRLLLQVDAVHAVSWLWPSA--ARVAALGAEGTGKVETAPAQLTQTLPTLRRRAV--RCGVCLAAVLR 1375 GS +LS GS+ +NQ +P GWT +M+A E+G R+ + L+ GA++S+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ LA + + +PLDVA Q GH+EVV E Q+GVR CGG S GVE+ RLA + + IM +L GVVDTG AL AA E +KFLLQ Q A+ NT D RTP C++ C SSPR+ R LI+A AD S V V G W S TPL H+LR+ KV + ATE QL L+A+ RLL QVDAVHAVSWLW S+ A+GA + T L + +PT+ R V R V L AV R Sbjct: 10 GSADRVDALLSMGSVDINQGNPKGWTPLMLAVEKGLSRVTKSLLGKGANVSVVGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTT-SRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 179 bits (454), Expect = 3.420e-45 Identity = 171/437 (39.13%), Postives = 217/437 (49.66%), Query Frame = 2 Query: 107 MSALPVASTWVADPCNKLHMAAMIGSLTSTKVILSSGSISVNQVDPDGWTSVMVAAERGFHRIVRYLMDNGADISIS-VRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNADPQLARAISTW-ERGIPLDVAAQGGHAEVVLEFIKQVGVRACGGTSHGVEAFRLAARFRHLGIMVMLADAGVVDTGPALTCAAAYGSEAELKFLLQQQE-----PTPAYLNTRDHTNRTPAYCSVSFCSPSSPRVLRSLIEAGADVASDVDVFDGMWNVVSTYTPLSLTNHNLREKKVKGERATEAQLYRLEAMRRLLLQVDAVHAVSWLWPS-AARVAALGAEGTGKVETAPAQLTQTLPTL--RRRAVRCGVCLAAVLRYSRK 1387 M +P+ W P N L AA GS + +L+SG+ ++Q + GWT +M+A+ G+ RIVR L++ GA + ++ XXXXXXXXXXXXXXXXXXXXXXXX ADP L A + ER +PLDVAAQ GH EVV E I+QVG+ CGG+S G A R AA F L IM +L DAGVVDTG AL AA YG EA LKFLL+Q AY+NT + T + C PRV++ L+EAGAD S V + + TPL LT L + K T + +LE +RRLLL+ +AVHAVSWLWPS + A+GTG+ T + + RR R G+ LAA+LRYS K Sbjct: 1 MRGVPLPQQWPHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRC---RPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSAKP--LTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGL-LAALLRYSSK 431
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 173 bits (439), Expect = 2.120e-43 Identity = 220/419 (52.51%), Postives = 263/419 (62.77%), Query Frame = 2 Query: 146 PCNKLHMAAMIGSLTSTKVILSSGSISVNQVDPDGWTSVMVAAERGFHRIVRYLMDNGADISISVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNADPQLARAISTWERGIPLDVAAQGGHAEVVLEFIKQVGVRACGGTSHGVEAFRLAARFRHLGIMVMLADAGVVDTGPALTCAAAYGSEAELKFLLQQQEPTPA---YLNT-RDHTNRTPAYCSVSFCSPSSPRVLRSLIEAGADVASDVDVFDGMWNVVSTYTPLSLTNHNLREKKVKGERATEAQLYRLEAMRRLLLQVDAVHAVSWLWPSAARVAALGAEGTGKVETAPAQ-LTQTLPTLRRRAVRCGVCLAAVLRYSRK 1387 P N+LH AA+ GS T+ +L+ G I ++Q DP GWT +M AAE G +++ L++ GA + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P L +S+ +PLD AA GH V E +++ G+R C G S GV+A AA +HL +M +L DAGVVDTG AL G E LKFLL+Q+ A Y +T RD TP +V+ P SPRV+R L++AGAD V V DG YTPL L EK V + AT QL L A RRLLLQV+ VHA SWLW A A + + E+ + L LP + RR+ R G L V R ++K Sbjct: 11 PRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTT-GPCSPRVVRLLVDAGADATLAVRVPDGFGRSTK-YTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKK 427
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 172 bits (436), Expect = 7.340e-43 Identity = 217/428 (50.70%), Postives = 256/428 (59.81%), Query Frame = 2 Query: 152 NKLHMAAMIGSLTSTKVILSSGSISVNQVDPDGWTSVMVAAERGFHRIVRYLMDNGADISISVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNADPQLARAISTWERGIPLDVAAQGGHAEVVLEFIKQVGVRACGGTSHGVEAFRLAARFRHLGIMVMLADAGVVDTGPALTCAAAYGSEAELKFLLQQQEPTP----AYLNT-RDHTNRTPAYCS--VSFCSPSSPRVLRSLIEAGADVASDVDVFDGMWNVVSTYTPLSLTNHNLREKKVKGERATEAQLYRLEAMRRLLLQVDAVHAVSWLWPSAARVAALGAEGTGKVET------APAQLTQTLPTLRRRAVRCGVCLAAVLRYSRK*PG 1396 NKLH AA GS T ILS+GSI ++ D G T +M A +V L+ GA +S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR A+P L R W+ +PLD AAQ G VVLE +++ G+R CGG + GV A +LAA H+ +M+ L AGVVDTG AL A ++G +KFLLQQQ TP AY++ RD RTP C+ V SP+V+R L++AGAD S V + TPLSL LR K + + L RLE +RRLLL+V+AVHA SWLW + L A GT ET AP QL LP LRRRA G A++ RY+ K G Sbjct: 16 NKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQH-LPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAP-QLRTVLPILRRRARGRGFVSASLCRYAVKLDG 441
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 169 bits (429), Expect = 2.190e-42 Identity = 184/430 (42.79%), Postives = 228/430 (53.02%), Query Frame = 2 Query: 116 LPVASTWVADPCNKLHMAAMIGSLTSTKVILSSGSISVNQVDPDGWTSVMVAAERGFHRIVRYLMDNGADISISVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-TNADPQLARAISTWERGIPLDVAAQGGHAEVVLEFIKQVGVRACGGTSHGVEAFRLAARFRHLGIMVMLADAGVVDTGPALTCAAAYGSEAELKFLLQQQE----PTPAYLN-TRDHTNRTPAYCSVSFCSPSSPRVLRSLIEAGADVASDVDVFDGMWNVVSTYTPLSLTNHNLREKKVKGERATEAQLYRLEAMRRLLLQVDAVHAVSWLWPSAARVAALGAEGTGKVETAPAQLTQTLPTLRRRAVRCGVCLAAVLRYSRK 1387 +P W P N+LH AA GS T ILSSG I++NQ DPDGWT +MVA++RG+ RIVR L+ GA++ I XXXXXXXXXXXXXXXXX XXXXXXXXXXXX XXXXXXXXXXXXXXXXX ADP L R + +R +PLD AA G + VV EF+ Q+G+ CGG S G A AA+ + + M +LA+AGVVDTG AL A E +KFLL+QQ+ PT AY++ RD RTP CS+ + G L +H L E +V G TE Q ++L A+ RLLL+V+AVHA SWLW S A A AE T + + P+ ++ P L + R L+AVLRYS K Sbjct: 3 MPAQEKWPRGPKNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGAYVDEARDPFGRTPLLCSIE--------------DEG------------------------LVDHYLGENRVIGRDITEEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTAEVTKRTKVTPSPRSRMFPVLGL-STRRNALLSAVLRYSSK 393
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 161 bits (408), Expect = 1.830e-39 Identity = 111/250 (44.40%), Postives = 144/250 (57.60%), Query Frame = 2 Query: 662 IPLDVAAQGGHAEVVLEFIKQVGVRACGGTSHGVEAFRLAARFRHLGIMVMLADAGVVD-TGPALTCAAAYGSEAELKFLLQQQEPT--PAYLN-TRDHTNRTPAYCSV--SFCSPSSPRVLRSLIEAGADVASDVDVFDGMWNVVSTYTPLSLTNH-NLREKKVKGER-ATEAQLYRLEAMRRLLLQVDAVHAVSWLWPSAARVAALGAEGTGKVETAPAQLTQTLPTLRRRAVRCGVCLAAVLRYSRK 1387 +PL+VAAQ G + VV E +++ G+R CGG S G++A R+AA + + IM ML DAGVVD G AL A G EA + FLL+QQE +Y+N RD T S + P +PR+ R L++AGAD S V + TPL N LRE G+ AT+ QL RLEA RR+LL+V AVHAVSW+WPS A + A A + +P QLT LP LRRRA R + + RYS+K Sbjct: 158 VPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRE--TNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17182.1 >prot_C-linearis_contig99.17182.1 ID=prot_C-linearis_contig99.17182.1|Name=mRNA_C-linearis_contig99.17182.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=428bp MSALPVASTWVADPCNKLHMAAMIGSLTSTKVILSSGSISVNQVDPDGWTback to top mRNA from alignment at C-linearis_contig99:398044..401839- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig99.17182.1 ID=mRNA_C-linearis_contig99.17182.1|Name=mRNA_C-linearis_contig99.17182.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3796bp|location=Sequence derived from alignment at C-linearis_contig99:398044..401839- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig99:398044..401839- >mRNA_C-linearis_contig99.17182.1 ID=mRNA_C-linearis_contig99.17182.1|Name=mRNA_C-linearis_contig99.17182.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at C-linearis_contig99:398044..401839- (Chordaria linearis ClinC8C monoicous)back to top |