mRNA_C-linearis_contig99.17178.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Match: A0A6H5KTF8_9PHAE (Dus domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF8_9PHAE) HSP 1 Score: 635 bits (1637), Expect = 1.410e-223 Identity = 317/377 (84.08%), Postives = 345/377 (91.51%), Query Frame = 1 Query: 46 MGVEDDTDRLYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYLESRGKKGNAIPFQTCPEIEGGRVVYQVGTGDAAHALRAAQHVQRDVAAVDVNMGCPKRFSLQGAMGAALLKRPEIAADIVGTLRRNLSVPVSAKIRLLDTPSDTVEFARRMEKAGACALTVHVRRVEDKPASKARWEELRTVVDAVNIPVIANGDVYTRADMAEIKALSGCSSVMLARPALLNCSIFKPDGAVLPLKEVIQQYLRECIRYDSIYQNAKYTVMEMLTKRRHPDHLKGSISLGLPAGAPGMREVTPAKTLQQLAKLWDVEADYDAELARRGERAEQLGDSSASASEPAERSCIHKFDDAYFL 1176 M VED D+LYR KVILAPMVR+GTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDY+E RGKKG A PFQTCP +E GR+VYQ+GTGDA +ALRAAQHV+RDVAAVD+NMGCPK+FSLQG MGAALLK+P++AADIVG LRRNLSVPVS KIRLL+TP +TVEFARRMEKAGACAL+VHVR+V D PASKARWEELR VVDAV+IPVIANGDVYTRADMA IKALSGCSSVMLARPALLNCSIFKPDG VLPLKEVIQQYLREC RYDS+YQNAKYTVMEMLTKRRHPDHLK SISLGLP GAPGMREVTPAKTL+QLA+LWDV AD+DAE RR +RAE+LG+ A++ E AER +HKFDDAYFL Sbjct: 1 MNVEDAVDQLYRGKVILAPMVRAGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYVEKRGKKGIATPFQTCPALERGRLVYQIGTGDATNALRAAQHVERDVAAVDINMGCPKKFSLQGGMGAALLKQPQVAADIVGILRRNLSVPVSVKIRLLETPGETVEFARRMEKAGACALSVHVRKVGDTPASKARWEELRPVVDAVDIPVIANGDVYTRADMAGIKALSGCSSVMLARPALLNCSIFKPDGHVLPLKEVIQQYLRECFRYDSVYQNAKYTVMEMLTKRRHPDHLKESISLGLPGGAPGMREVTPAKTLEQLARLWDVGADFDAETVRRRKRAEELGE--ATSIEQAERGTVHKFDDAYFL 375
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Match: D8LPM6_ECTSI (Dus domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM6_ECTSI) HSP 1 Score: 623 bits (1606), Expect = 1.860e-218 Identity = 313/371 (84.37%), Postives = 337/371 (90.84%), Query Frame = 1 Query: 46 MGVEDDTDRLYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYLESRGKKGNAIPFQTCPEIEGGRVVYQVGTGDAAHALRAAQHVQRDVAAVDVNMGCPKRFSLQGAMGAALLKRPEIAADIVGTLRRNLSVPVSAKIRLLDTPSDTVEFARRMEKAGACALTVHVRRVEDKPASKARWEELRTVVDAVNIPVIANGDVYTRADMAEIKALSGCSSVMLARPALLNCSIFKPDGAVLPLKEVIQQYLRECIRYDSIYQNAKYTVMEMLTKRRHPDHLKGSISLGLPAGAPGMREVTPAKTLQQLAKLWDVEADYDAELARRGERAEQLGDSSASASEPAERSCIHKF 1158 M VED D+LYR KVILAPMVR+GTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDY+E RGKKG A PFQTCP +E GR+VYQ+GTGDA +ALRAAQHV+RDVAAVD+NMGCPKRFSLQG MGAALLK+P++AADIVGTLRRNLSVPVS KIRLL+TP +TVEFARRMEKAGACAL+VHVR+V D PASKARWEELR VVDAVNIPVIANGDVYTRADMA IKALSGCSSVMLARPALLNCSIFKPDG VLPLKEVIQQYLREC RYDS+YQNAKYTVMEMLTKRRHPDHLK SISLGLP GAPGMREVTPAKTL QLA+LWDV AD+DAE RR +RAEQLG+ A++ E AER +H Sbjct: 1 MNVEDAADQLYRGKVILAPMVRAGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYVEKRGKKGIATPFQTCPALERGRLVYQIGTGDATNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPQVAADIVGTLRRNLSVPVSVKIRLLETPGETVEFARRMEKAGACALSVHVRKVGDTPASKARWEELRPVVDAVNIPVIANGDVYTRADMAGIKALSGCSSVMLARPALLNCSIFKPDGHVLPLKEVIQQYLRECFRYDSVYQNAKYTVMEMLTKRRHPDHLKESISLGLPGGAPGMREVTPAKTLGQLARLWDVGADFDAETVRRRKRAEQLGE--ATSIEQAERGTVHNL 369
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Match: H3GYM5_PHYRM (U1-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYM5_PHYRM) HSP 1 Score: 330 bits (846), Expect = 1.390e-104 Identity = 168/336 (50.00%), Postives = 240/336 (71.43%), Query Frame = 1 Query: 73 LYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYLESRGKKGNAIPFQTCPEIEGGRVVYQVGTGDAAHALRAAQHVQRDVAAVDVNMGCPKRFSLQGAMGAALLKRPEIAADIVGTLRRNLSVPVSAKIRLLDTPSDTVEFARRMEKAGACALTVHVRRVEDKPASKARWEELRTVVDAVNIPVIANGDVYTRADMAEIKALSGCSSVMLARPALLNCSIFKPDGAVLPLKEVIQQYLRECIRYDSIYQNAKYTVMEMLTKRRHPDHLKGSISLGLPAG-APGMREVTPAKTLQ-----QLAKLWDVEADYD 1062 LY NKV L+PMVRSGTLP R L+LRYGAD V+ EE++D+R+++AVR +N V+ +VD++ + G+++ F+TCPE E G+VV+Q+GT DA AL+AA+ V RDVAAVD+NMGCPK FS+QG MGAALL++PE+A DI+ TLRRNL++PVS KIRLL DT++ ARR+E AGA A+ VH+R++ ++P KA WE+L VV A+++PV+ANGDV+ D+ +++ +SG SS ++AR AL N SIF+ +G LP+ +V++ YL+ D++YQN KY VM M+ P L+ + + G G A G R VT + Q+ LWD++ Y+ Sbjct: 4 LYENKVCLSPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRMKNEVINSVDFVS---RNGDSVVFRTCPE-EAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIIKTLRRNLNIPVSCKIRLLPEIQDTIDTARRLEDAGAYAVGVHMRQIHERPHDKASWEKLAPVVSALSVPVLANGDVFLHEDIDKLRKISGASSFLIARGALTNPSIFRKEGR-LPIDQVVRDYLQAAAEVDNVYQNTKYNVMRMI-----PSSLEDAYASGNNCGYAKGARVVTVPELAATRNGLQMYSLWDLQNCYN 329
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Match: G5AD05_PHYSP (U1-type domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AD05_PHYSP) HSP 1 Score: 329 bits (844), Expect = 2.930e-104 Identity = 166/336 (49.40%), Postives = 238/336 (70.83%), Query Frame = 1 Query: 73 LYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYLESRGKKGNAIPFQTCPEIEGGRVVYQVGTGDAAHALRAAQHVQRDVAAVDVNMGCPKRFSLQGAMGAALLKRPEIAADIVGTLRRNLSVPVSAKIRLLDTPSDTVEFARRMEKAGACALTVHVRRVEDKPASKARWEELRTVVDAVNIPVIANGDVYTRADMAEIKALSGCSSVMLARPALLNCSIFKPDGAVLPLKEVIQQYLRECIRYDSIYQNAKYTVMEMLTKRRHPDHLKGSISLGLPAG-APGMREVTPAKTLQ-----QLAKLWDVEADYD 1062 LY NKV L+PMVRSGTLP R L+LRYGAD V+ EE++D+R+++AVR N V+ VD++ + G+++ F+TCPE E G+VV+Q+GT DA AL+AA+ V RDVAAVD+NMGCPK FS+QG MGAALL++PE+A DI+ TLRRNL++PVS KIRLL DT++ A+R+E AGACA+ VH+R++ ++P +KA W+ L VV A+++PV+ANGDV+ D+ +++ +SG SS ++AR AL N SIF+ +G LP+ +V++ YL+ D++YQN KY VM M+ P L+ + + G G A G VT + Q+ LWD++ Y+ Sbjct: 4 LYENKVCLSPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNDVVNAVDFVS---RNGDSVVFRTCPE-EAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIIKTLRRNLNIPVSCKIRLLPEIQDTIDTAKRLEDAGACAVGVHLRQIHERPHNKASWDRLAPVVSALSVPVLANGDVFEHEDIDKLRKISGASSFLIARGALANPSIFRKEGR-LPIDQVVKDYLKAAAETDNVYQNTKYNVMRMI-----PSSLEDAFASGNKYGYAKGAHVVTVPELAAMRNGLQMYSLWDLQKYYN 329
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Match: A0A0P1AUH8_PLAHL (Trna-dihydrouridine synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUH8_PLAHL) HSP 1 Score: 325 bits (833), Expect = 5.320e-103 Identity = 160/331 (48.34%), Postives = 232/331 (70.09%), Query Frame = 1 Query: 73 LYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYLESRGKKGNAIPFQTCPEIEGGRVVYQVGTGDAAHALRAAQHVQRDVAAVDVNMGCPKRFSLQGAMGAALLKRPEIAADIVGTLRRNLSVPVSAKIRLLDTPSDTVEFARRMEKAGACALTVHVRRVEDKPASKARWEELRTVVDAVNIPVIANGDVYTRADMAEIKALSGCSSVMLARPALLNCSIFKPDGAVLPLKEVIQQYLRECIRYDSIYQNAKYTVMEMLTKRRHPDHL--KGSISLGLPAGAPGMREVTPAKTLQQLAKLWDVEADY 1059 LY NKV L+PMVRSGTLP R L+LRYGAD V+ EE+ID+R+++++R N V+ VD++ + G+++ F+TC E E ++V+Q+GT DA AL+AA+ V RDV AVD+NMGCPK FS+QG MGAALLK+PE+A DI+ +LRRNL++PVS KIRLL DT++ A+R+E AGACA+ VH+R+V ++P KA W+ L +V A+++PV+ANGDV+ DM +++A+SG SS ++AR AL N SIF+ +G LP+ +V+++YL D+++QN KY VM M+ H D + + G A + E+ K Q+ LWD++ Y Sbjct: 4 LYENKVCLSPMVRSGTLPLRLLSLRYGADLVYGEEIIDKRIISSIRVPNEVVNAVDFVS---RNGDSVVFRTCSE-ESKKIVFQIGTADAVLALKAAEMVARDVVAVDINMGCPKHFSIQGGMGAALLKKPEVACDIMKSLRRNLNIPVSCKIRLLSETQDTIDLAKRLEHAGACAIGVHMRQVHERPRDKASWDRLAPIVSALSVPVLANGDVFAYEDMKKLRAISGVSSFLIARGALANASIFRENGR-LPVDQVVREYLMAAAEVDNVFQNTKYNVMRMIPNS-HADAYASENNYGYGKNARVVTVSELAATKNPLQMYSLWDLQNCY 328
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Match: D0P0N4_PHYIT (tRNA-dihydrouridine synthase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P0N4_PHYIT) HSP 1 Score: 325 bits (833), Expect = 6.180e-103 Identity = 162/331 (48.94%), Postives = 232/331 (70.09%), Query Frame = 1 Query: 73 LYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYLESRGKKGNAIPFQTCPEIEGGRVVYQVGTGDAAHALRAAQHVQRDVAAVDVNMGCPKRFSLQGAMGAALLKRPEIAADIVGTLRRNLSVPVSAKIRLLDTPSDTVEFARRMEKAGACALTVHVRRVEDKPASKARWEELRTVVDAVNIPVIANGDVYTRADMAEIKALSGCSSVMLARPALLNCSIFKPDGAVLPLKEVIQQYLRECIRYDSIYQNAKYTVMEMLTKRRHPDHLKGS-ISLGLPAGAPGMREVTPAKTLQQLAKLWDVEADYD 1062 LY NKV L+PMVRSGTLP R L+LRYGAD V+ EE+ID+R+++AVR N V+ VD++ + G+++ F+TC E E G+VV+Q+GT DA AL+AA+ V RDVAAVD+NMGCPK FS+QG MGAALL++PE+A DI+ TLRRNL++PVS KIRLL DTV+ ARR+E AGACA+ VH+R+ ++P KA W+ L VV A+++PV+ANGDV+ D+ +++ LSG SS ++AR AL N SIF+ +G LP+ +V+++YL+ D+++QN KY VM M+ + G+ A + ++ + Q+ LWD++ Y+ Sbjct: 4 LYANKVCLSPMVRSGTLPLRLLSLRYGADLVYGEEIIDKRIISAVRVPNDVVNAVDFVS---RNGDSVVFRTCSE-EAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDLARRLEDAGACAVGVHMRQTHERPHDKASWDRLAPVVSALSVPVLANGDVFMHEDINKLRKLSGASSFLIARGALANPSIFRKEGR-LPIDQVVREYLKAAAEVDNVFQNTKYNVMRMIPSSLEDAYASGNKYGYAKDAHVVTVPDLAATRNGLQMYSLWDLQNYYN 329
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Match: A0A225WUV3_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WUV3_9STRA) HSP 1 Score: 325 bits (832), Expect = 1.210e-102 Identity = 163/332 (49.10%), Postives = 234/332 (70.48%), Query Frame = 1 Query: 73 LYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYLESRGKKGNAIPFQTCPEIEGGRVVYQVGTGDAAHALRAAQHVQRDVAAVDVNMGCPKRFSLQGAMGAALLKRPEIAADIVGTLRRNLSVPVSAKIRLLDTPSDTVEFARRMEKAGACALTVHVRRVEDKPASKARWEELRTVVDAVNIPVIANGDVYTRADMAEIKALSGCSSVMLARPALLNCSIFKPDGAVLPLKEVIQQYLRECIRYDSIYQNAKYTVMEMLTKRRHPDHLKGSISLGLPAGAPGMR--EVTPAKTLQQLAKLWDVEADYD 1062 LY NK+ L+PMVRSGTLP R L+LRYGAD V+ EE++D+R+++AVR N V+ +VD++ + G+++ F+TCPE E G+VV+Q+GT DA AL+AA+ V RDVAAVD+NMGCPK FS+QG MGAALL++PE+A DI+ TLRRNL++PVS KIRLL DTV+ A+R+E AGA A+ VH+R++ ++P KA W+ L VV A+++PV+ANGDV+ D+ +++ +SG SS ++AR AL N SIF +G LP+ +V++ YL+ D++YQN KY VM M+ D S + G GA + E+ + Q+ LWD++ Y+ Sbjct: 4 LYENKICLSPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNEVVNSVDFVS---RNGDSVVFRTCPE-EAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDAAKRLENAGAYAVGVHMRQIHERPHDKASWDRLAPVVSALSVPVLANGDVFMYEDIEKLRKISGASSFLIARGALANPSIFLKEGR-LPVDDVVRDYLKAAAETDNVYQNTKYNVMRMIPSSLE-DAYASSNNYGYAKGAAVVTVPELAATRNCLQMYSLWDLQNTYN 329
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Match: A0A484DW69_BRELC (U1-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DW69_BRELC) HSP 1 Score: 323 bits (828), Expect = 2.730e-102 Identity = 163/334 (48.80%), Postives = 231/334 (69.16%), Query Frame = 1 Query: 73 LYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYLESRGKKGNAIPFQTCPEIEGGRVVYQVGTGDAAHALRAAQHVQRDVAAVDVNMGCPKRFSLQGAMGAALLKRPEIAADIVGTLRRNLSVPVSAKIRLLDTPSDTVEFARRMEKAGACALTVHVRRVEDKPASKARWEELRTVVDAVNIPVIANGDVYTRADMAEIKALSGCSSVMLARPALLNCSIFKPDGAVLPLKEVIQQYLRECIRYDSIYQNAKYTVMEMLTKRRHPDHLK----GSISLGLPAGAPGMREVTPAKTLQQLAKLWDVEADYD 1062 LY NKV L+PMVRSGTLP R L+LRYGAD V+ EE++D+R+++AVR N V+ TVD++ + G+++ F+TCPE E +V++Q+GT DA AL+AA+ V RDV+A+D+NMGCPK FS+QG MGAALL++PE+A DI+ TLRRNL++P+S KIRLL DTV+ ARR+E AGA A+ VH+R++ ++P KA W+ L VV A+++PV+ANGDV+ DM +++ +SG SS ++AR AL N SIF+ G LP+ EV+++YL D+++QN KY VM M+ P L+ G + EV K QL LWD++ Y+ Sbjct: 4 LYENKVCLSPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVRNDVINTVDFVS---RSGDSVVFRTCPE-ESSKVIFQIGTADAVLALKAAEAVARDVSAIDINMGCPKHFSIQGGMGAALLQKPEVACDIMKTLRRNLNIPLSCKIRLLPEIQDTVDLARRLEDAGAHAIGVHMRQIHERPVDKASWDRLAPVVSALSVPVLANGDVFRYEDMDKLREISGVSSFLVARGALSNPSIFRRQGR-LPVDEVVREYLLAAAETDNVFQNTKYNVMRMV-----PSSLEIASSNKFGYGKHTQVVTVSEVAATKNALQLYSLWDLQNTYN 327
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Match: A0A2P4WWN1_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWN1_9STRA) HSP 1 Score: 324 bits (830), Expect = 2.800e-102 Identity = 162/332 (48.80%), Postives = 234/332 (70.48%), Query Frame = 1 Query: 73 LYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYLESRGKKGNAIPFQTCPEIEGGRVVYQVGTGDAAHALRAAQHVQRDVAAVDVNMGCPKRFSLQGAMGAALLKRPEIAADIVGTLRRNLSVPVSAKIRLLDTPSDTVEFARRMEKAGACALTVHVRRVEDKPASKARWEELRTVVDAVNIPVIANGDVYTRADMAEIKALSGCSSVMLARPALLNCSIFKPDGAVLPLKEVIQQYLRECIRYDSIYQNAKYTVMEMLTKRRHPDHLKGSISLGLPAGAPGMR--EVTPAKTLQQLAKLWDVEADYD 1062 LY NK+ L+PMVRSGTLP R L+LRYGAD V+ EE++D+R+++AVR N V+ +VD++ + G+++ F+TCPE E G+VV+Q+GT DA AL+AA+ V RDVAAVD+NMGCPK FS+QG MGAALL++PE+A DI+ TLRRNL++PVS KIRLL DTV+ A+R+E AGA A+ VH+R++ ++P KA W+ L VV A+++PV+ANGDV+ D+ +++ +S SS ++AR AL N SIF+ +G LP+ EV++ YL D++YQN KY +M M+ + G+ + G GA + E+ + Q+ LWD+E Y+ Sbjct: 4 LYENKICLSPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNEVVNSVDFVS---RNGDSVVFRTCPE-EAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDTAKRLEDAGAYAVGVHMRQIHERPHDKASWDRLAPVVSALSVPVLANGDVFMYEDIDKLRKISSASSFLIARGALANPSIFRKEGR-LPVDEVVRDYLNAAAETDNVYQNTKYNIMRMIPSSMEDAYTSGN-NYGYAKGAHVVTVPELAATRNGLQMYSLWDLENTYN 329
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Match: W2G1E1_PHYPR (U1-type domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2G1E1_PHYPR) HSP 1 Score: 323 bits (828), Expect = 3.680e-102 Identity = 160/331 (48.34%), Postives = 233/331 (70.39%), Query Frame = 1 Query: 73 LYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYLESRGKKGNAIPFQTCPEIEGGRVVYQVGTGDAAHALRAAQHVQRDVAAVDVNMGCPKRFSLQGAMGAALLKRPEIAADIVGTLRRNLSVPVSAKIRLLDTPSDTVEFARRMEKAGACALTVHVRRVEDKPASKARWEELRTVVDAVNIPVIANGDVYTRADMAEIKALSGCSSVMLARPALLNCSIFKPDGAVLPLKEVIQQYLRECIRYDSIYQNAKYTVMEMLTKRRHPDHLK-GSISLGLPAGAPGMREVTPAKTLQQLAKLWDVEADYD 1062 LY NKV L+PMVRSGTLP R L+LRYGAD V+ EE++D+R+++AVR N V+ VD++ + G+++ F+TCPE E G+VV+Q+GT DA AL+AA+ V RDVAAVD+NMGCPK FS+QG MGAALL++PE+A DI+ TLRRNL++PVS KIRLL DTV+ A+R+E AGA A+ VH+R++ ++P KA W+ L VV A+++PV+ANGDV+T D+ +++ +SG SS ++AR AL N SIF+ +G LP+ EV+++YL+ D+++QN KY VM M+ + + A + ++ + Q+ LWD++ Y+ Sbjct: 4 LYENKVCLSPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNEVVNAVDFVS---RNGDSVVFRTCPE-EAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDLAKRLEDAGAYAVGVHMRQIHERPHDKASWDRLAPVVSALSVPVLANGDVFTHDDIDKLRKISGASSFLVARGALANPSIFRKEGR-LPIDEVVREYLKAAAETDNVFQNTKYNVMRMIPSSLEDAYASCNNYGYAKDAHVVTVPDLAATRNGLQMYSLWDLQNYYN 329 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17178.1 >prot_C-linearis_contig99.17178.1 ID=prot_C-linearis_contig99.17178.1|Name=mRNA_C-linearis_contig99.17178.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=470bp MGVEDDTDRLYRNKVILAPMVRSGTLPFRALALRYGADTVFTEEVIDRRVback to top mRNA from alignment at C-linearis_contig99:371848..377976- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig99.17178.1 ID=mRNA_C-linearis_contig99.17178.1|Name=mRNA_C-linearis_contig99.17178.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6129bp|location=Sequence derived from alignment at C-linearis_contig99:371848..377976- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig99:371848..377976- >mRNA_C-linearis_contig99.17178.1 ID=mRNA_C-linearis_contig99.17178.1|Name=mRNA_C-linearis_contig99.17178.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2820bp|location=Sequence derived from alignment at C-linearis_contig99:371848..377976- (Chordaria linearis ClinC8C monoicous)back to top |