mRNA_C-linearis_contig99.17164.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Match: D7G7V1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V1_ECTSI) HSP 1 Score: 549 bits (1414), Expect = 1.550e-195 Identity = 275/347 (79.25%), Postives = 284/347 (81.84%), Query Frame = 1 Query: 31 LVAGQGPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDPDKEGTGEVGAQELEQGLLVKSYAGPHGYEVLDVAVLGDNSQFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSTEGSVLFTASYDK-----------------------------------------TVRAWDMRSRNRSPIQTLEGCKDSATSVSATPSGDELVVGCVDGKVRTYDLRAARVHEDEVHAPVTHASVSHDGNCLLVTCLGGVVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVHIWDIVEAKVTRLLKHHTRPVCSTSYHPSEAMLLTASYDGSAVLW 948 + GQGP FVVRFT GDGKYCLVAGQDRTVRLYNPHR DPDKEGT + G ELEQ LLVKSYAGPHGYEVLDVAVL DNS+FVSCGEDKAAFLWDVSTGAVVRR+QGHEQRIN+CCF EGSVLFTASYDK TVRAWDMRSRNRSPIQTLEGCKDSATSV PSGDE+VVGCVDGKVRTYDLR ARVHED+VHAPVTHASVSHDGNCLLVTCLGG+VRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHV+IWDIVE KVTR LKHH RPVCS SYHPSE MLLTASYDGSAVLW Sbjct: 1 MTVGQGPSFVVRFT-GDGKYCLVAGQDRTVRLYNPHRADPDKEGTTKAG--ELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKGRGGVTLYNKICLRVYLVALQQSSHCCINFSPPTTHATRAQTVRAWDMRSRNRSPIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGIVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPSEPMLLTASYDGSAVLW 344
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Match: A0A7S2WCM2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCM2_9STRA) HSP 1 Score: 323 bits (829), Expect = 4.350e-107 Identity = 162/308 (52.60%), Postives = 215/308 (69.81%), Query Frame = 1 Query: 25 RRLVAGQGPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDPDKEGTGEVGAQELEQGLLVKSYAGPHGYEVLDVAVLGDNSQFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSTEGSVLFTASYDKTVRAWDMRSRNRSPIQTLEGCKDSATSVSATPSGDELVVGCVDGKVRTYDLRAARVHEDEVHAPVTHASVSHDGNCLLVTCLGGVVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVHIWDIVEAKVTRLLKHHTRPVCSTSYHPSEAMLLTASYDGSAVLW 948 R L + +GP R++ GDGKY + G D+T+RL+NP R D E + V E+ L +K+Y GPH Y+++DV + DN++FVSCG D+AAFL+DV +G VVRR +GH QRIN+ F+ E +VLFTASYD+TVR WD+RSRNR PIQ L KDS TSVS+ S E++ CVDG VR +DLR + D + P+T A++SHDG C++ +CL + LLEKS GS LNTY GH+HK Y +ES ++TDAH++SGSEDG V IWD+VEA VT+ L+ H R V + HP E+ L+T SYDG+AV W Sbjct: 11 RVLPSHRGPVARARWS-GDGKYIITCGHDKTLRLWNPTRTD---ETSRPVDGCEV--ALEIKAYTGPHAYDIVDVGIFRDNAKFVSCGGDRAAFLFDVQSGHVVRRFEGHSQRINSVGFNAEDTVLFTASYDQTVRCWDLRSRNREPIQVLSDFKDSVTSVSS--SAHEIITSCVDGCVRIHDLRMGECNADNLGVPLTCATLSHDGKCIVASCLNSQIGLLEKSDGSVLNTYKGHIHKQYALESCFSHTDAHILSGSEDGTVLIWDLVEAGVTQRLEGHKRAVGGVAPHPKESKLVTCSYDGTAVYW 310
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Match: K8ZAG4_NANGC (Mitogen-activated protein kinase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAG4_NANGC) HSP 1 Score: 297 bits (760), Expect = 2.950e-96 Identity = 148/332 (44.58%), Postives = 205/332 (61.75%), Query Frame = 1 Query: 4 DLPRVPVRRLVAGQGPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDPDKEGTGEVGAQELEQGLLVKSYAGPHGYEVLDVAVLGDNSQFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSTEGSVLFTASYDKTVRAWDMRSRNRSPIQTLEGCKDSATSVSATPSGD---------ELVVGCVDGKVRTYDLRAARVHEDEVHAPVTHASVSHDGNCLLVTCLGGVVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVHIWDIVEA--------KVTRLLKHHTRPVCSTSYHPSEAMLLTASYDGSAVLW 948 LP R+LV +GP + +RF G YC+ GQD++++L+NP R D GE +LV+++ GPHGYE+ DVA+ DN++F SCG D A +LWDV+T VV++ GH IN+ F+ EG+V+ + SYD+TV+ WD+RS NR PIQTL+ KDS T V G E++ VDG +RTYD+R + D+ P++ +VS DG C+L+ L GVVRLLE+S+G LN Y GH H++Y +ES NTDA V+SGSEDG +++WD+VE K +LK H R + S S+HPSEA+L+TA YDG W Sbjct: 14 SLPTKVRRKLVGHRGPIYTIRFNE-KGTYCMTGGQDKSIKLWNPFRPSADANKAGEA--------MLVQTFTGPHGYEIRDVAITTDNARFASCGGDTAFYLWDVATARVVKKFSGHAHMINSVAFNAEGTVVLSGSYDRTVKIWDLRSNNRDPIQTLDDFKDSVTRVMVLEEGGRAGKGAGGKEVLATSVDGCLRTYDIRKGVMWMDDCKEPLSSVTVSGDGQCVLMNGLDGVVRLLERSTGEMLNNYQGHTHQAYPIESCFDNTDAFVLSGSEDGSLYVWDLVEGGSEGGKEGKPVAVLKEHKRALGSMSFHPSEAVLVTAGYDGVGCCW 336
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Match: A0A6G0WN05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN05_9STRA) HSP 1 Score: 288 bits (736), Expect = 4.180e-93 Identity = 142/303 (46.86%), Postives = 196/303 (64.69%), Query Frame = 1 Query: 43 QGPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDPDKEGTGEVGAQELEQGLLVKSYAGPHGYEVLDVAVLGDNSQFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSTEGSVLFTASYDKTVRAWDMRSRNR-SPIQTLEGCKDSATSVSATPSGDELVVGCVDGKVRTYDLRAARVHEDEVHAPVTHASVSHDGNCLLVTCLGGVVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVHIWDIVEAKVTRLLKHHTRPVCSTSYHPSEAMLLTASYDGSAVLW 948 +GP + VRF G YC+ G DRT+RL+NPHR PD G A +++K+Y G HGYE+ DVA+ DN++FVSCG DK F WDVSTG V+R+ +GH +NA F+ + +VL +ASYD TVR WDMR+RN +PIQ L+ +DS TSV T E++ CVDG VR YD+RA + ED +H PVT +++ D NC++ + GV+R EK SG++LNT+ GH SY +E +N DA+++SGSEDG V +WD++ + H RPV S + HP+E M+LTAS D + +W Sbjct: 13 EGPVYAVRFNE-KGTYCMTCGSDRTIRLWNPHREGPD----GPTSA------MMIKAYKGLHGYEIRDVAIENDNAKFVSCGRDKVVFHWDVSTGKVIRKFEGHASSVNAVEFNDDCTVLCSASYDSTVRLWDMRARNSFTPIQVLDHFRDSVTSVRVTDH--EIITSCVDGFVRVYDIRAGMLTEDNLHHPVTCLALTSDLNCIVASTTNGVLRFFEKKSGTELNTFQGHSVASYGLECAFSNDDAYILSGSEDGRVVVWDMLTKDTALSFQAHDRPVRSIASHPAEPMILTASVDNTVKVW 302
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Match: A0A1V9Z342_9STRA (Mitogen-activated protein kinase organizer n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z342_9STRA) HSP 1 Score: 282 bits (722), Expect = 5.310e-91 Identity = 153/312 (49.04%), Postives = 195/312 (62.50%), Query Frame = 1 Query: 28 RLVAGQ-GPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDPDKEGTGEVGAQELEQGLLVKSYAGPHGYEVLDVAVLGDNSQFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSTEGSVLFTASYDKTVRAWDMRSRNR-SPIQTLEGCKDSATSVSATPSGDELVVGCVDGKVRTYDLRAARVHEDEVHAPVTHASVSHDGNCLLVTCLGGVVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVHIWDIV-EAKVTRLLKHHTRPVCSTSYHPSEAMLLTASYDGSAVLWTS 954 R++ G GP VRF G YC+ G DRT+RL+NPHR G E LVKSY G HGYEV DVA+ DN++FVSCG DKA F WDV TG VVR+++GH INA ++ + SVL +ASYD TVR WDMRSRN +PIQ LE KDS TSV T E++ G VDG VRTYDLRA + +D VH+PV ++S D NC++ + V L EK++GS+LN + GH SY +E+ DAH+ SGSEDG V IWD+V + ++ H +PV S HP+E MLLTAS D + +W + Sbjct: 7 RVLRGHVGPVHAVRFN-DKGTYCMSCGNDRTIRLWNPHR----------EGLDGPESAFLVKSYTGFHGYEVRDVAIENDNAKFVSCGRDKAIFQWDVVTGKVVRKLEGHTHSINAVEYNEDCSVLASASYDSTVRLWDMRSRNSFAPIQILEHFKDSVTSVKLTTH--EIIAGSVDGHVRTYDLRAGLLTQDNVHSPVVSVNLSSDLNCVVAATMAKTVYLFEKATGSELNAFEGHRMDSYGVEAGFTYDDAHIYSGSEDGRVVIWDMVHKTDTSKSFTAHHKPVRSVVSHPTENMLLTASVDSTVKVWVA 305
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Match: A0A484DRX5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRX5_BRELC) HSP 1 Score: 281 bits (719), Expect = 1.770e-90 Identity = 137/317 (43.22%), Postives = 200/317 (63.09%), Query Frame = 1 Query: 4 DLPRVPVRRLVAGQGPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDPDKEGTGEVGAQELEQGLLVKSYAGPHGYEVLDVAVLGDNSQFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSTEGSVLFTASYDKTVRAWDMRSRNR-SPIQTLEGCKDSATSVSATPSGDELVVGCVDGKVRTYDLRAARVHEDEVHAPVTHASVSHDGNCLLVTCLGGVVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVHIWDIVEAKVTRLLKHHTRPVCSTSYHPSEAMLLTASYDGSAVLWT 951 ++P V +R L GP +RF + G Y + GQD+T++L+NPHR +K +Q LLVK+Y G HGY+V DV + DNS+F SCG D+A F+WDV T V+R+ +GHE +N F+ SVL + SYDKTVRAWD+R+RN PIQ L+ +DS TS+ T E+V GCVDG VRTYDLRA ++ + ++ PV + S D +L CL G +RL+EK +G ++ ++ GH+ ++Y++E ++++ A V+SGSEDG V+ WD+V+ K H +PV + YHP +ML+T DGS +W+ Sbjct: 5 EVPTVCIRELHGHHGPINSIRFNS-KGTYVMTCGQDKTIKLWNPHRDCEEKP----------KQALLVKTYEGRHGYDVQDVTIARDNSKFASCGRDRAVFMWDVQTAKVIRKFEGHEHSVNCVQFNAYSSVLLSGSYDKTVRAWDIRARNAYMPIQILDDFRDSVTSMVVTDH--EIVAGCVDGIVRTYDLRAGQLFREHINEPVVSVTQSPDARFILAGCLDGSIRLIEKVNGREIKSFRGHIVQNYKIECTISSSGAFVLSGSEDGKVYWWDLVDEKCRNSFSAHAKPVRALGYHPEGSMLVTGCVDGSGKVWS 308
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Match: A0A836CAS4_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAS4_9STRA) HSP 1 Score: 281 bits (718), Expect = 1.840e-89 Identity = 143/312 (45.83%), Postives = 193/312 (61.86%), Query Frame = 1 Query: 7 LPRVPVRRLVAGQGPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDP------DKEGTGEVGAQELEQGLLVKSYAGPHGYEVLDVAVLGDNSQFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSTEGSVLFTASYDKTVRAWDMRSRNRSPIQTLEGCKDSATSVSATPSGDELVVGCVDGKVRTYDLRAARVHEDEVHAPVTHASVSHDGNCLLVTCLGGV-VRLLEKSS--------GSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVHIWDIVEAKVTRLLKHHTRPVCSTSYHP 897 LP P R AG+GP ++ R TA DGKY L GQDRTVRL+NPH+ DP + LE L++K+Y G HG+E+ D+AV DNS+ SCG D+AA +WDV+TGA+ R++ H+ +NAC + + +VL T SYD+TVRAWD+R+ R+P+Q LEG +DS TS+ P G +V G VDG+VRTYD RAA + ED+ PVT + SHDG C+L +CLG +RLLE+ +QL Y GH H Y + + + D+HV+S SEDG V WD+V V L+ H RP + + HP Sbjct: 4 LPSKPTRVAKAGEGPLYIARLTA-DGKYLLTGGQDRTVRLWNPHKPDPAAXXXXXXXXXXATSDEPLEAALMIKAYGGGHGHEICDLAVAADNSKVASCGGDRAAVVWDVATGAL-RKLPAHDAAVNACAATADFAVLLTGSYDRTVRAWDLRAHGRAPVQVLEGARDSITSLLVLPCG-AIVAGSVDGRVRTYDARAAALIEDDCREPVTCVAASHDGKCVLASCLGSATLRLLERGGXXXXXXXXSAQLAAYRGHAHARYPLRTAFSADDSHVLSCSEDGDVVAWDLVTGAVAARLRRHARPTSAIAAHP 312
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Match: H3G7W6_PHYRM (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3G7W6_PHYRM) HSP 1 Score: 278 bits (710), Expect = 1.990e-89 Identity = 136/302 (45.03%), Postives = 195/302 (64.57%), Query Frame = 1 Query: 46 GPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDPDKEGTGEVGAQELEQGLLVKSYAGPHGYEVLDVAVLGDNSQFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSTEGSVLFTASYDKTVRAWDMRSRNRS-PIQTLEGCKDSATSVSATPSGDELVVGCVDGKVRTYDLRAARVHEDEVHAPVTHASVSHDGNCLLVTCLGGVVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVHIWDIVEAKVTRLLKHHTRPVCSTSYHPSEAMLLTASYDGSAVLW 948 GP VRF A G Y + GQD+TV+L+NPHR +K + LL+K+Y G HGY+V DVA+ DNS+F SCG D+ F+WDV T V+R+ +GHE IN ++ + SVL + SYDKT+RAWD+R+RN PIQ ++ KDS TS+ E++ GCVDG VRTYDLRA ++ + ++ PV ++S D LL CL G +RL+EK++G+++ +Y GHL + Y++E ++ A V+SGSEDG V+ WDIV+AK T+ L H +PV + + HP +M +T DG+A +W Sbjct: 1 GPVNAVRFNA-KGTYVMTCGQDKTVKLWNPHRDAVEKPN----------EALLIKTYEGRHGYDVQDVAIAHDNSKFASCGRDRDVFMWDVPTAQVIRKFEGHEHSINCVRYNADSSVLLSGSYDKTIRAWDIRARNAFVPIQVMDDFKDSVTSMVVKEH--EIIAGCVDGVVRTYDLRAGQLFREHINEPVVSVALSPDARFLLAGCLDGSIRLIEKTNGTEVESYRGHLVRDYKIECGFSSDGAFVLSGSEDGKVYWWDIVDAKQTQTLVAHEKPVRALACHPESSMFVTGCTDGTAKVW 289
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Match: K3WKM8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKM8_GLOUD) HSP 1 Score: 278 bits (711), Expect = 2.690e-89 Identity = 144/315 (45.71%), Postives = 192/315 (60.95%), Query Frame = 1 Query: 7 LPRVPVRRLVAGQGPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDPDKEGTGEVGAQELEQGLLVKSYAGPHGYEVLDVAVLGDNSQFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSTEGSVLFTASYDKTVRAWDMRSRNRS-PIQTLEGCKDSATSVSATPSGDELVVGCVDGKVRTYDLRAARVHEDEVHAPVTHASVSHDGNCLLVTCLGGVVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVHIWDIVEAKVTRLLKHHTRPVCSTSYHPSEAMLLTASYDGSAVLW 948 +P R L GP VRF A G Y + GQD+TVRL+NPHR D G LLVK+Y G HGY+V DVA+ DNS+F SCG DKA FLWDV T V+R+ +GHE +N ++ + +VL + SYDKT+RAWDMR+RN PIQ ++ KDS TS+ S E+ GCVDG VRT+DLRA V+ + + PV S+S D LL +CL G +RL+EK SG + Y GH +YR+ES ++ A V+SGSEDG V+ WD+V A++ H +P+ + + HP +L+T DGSA +W Sbjct: 5 IPTTCARVLRGHHGPVNAVRFNA-KGTYVMTCGQDKTVRLWNPHRDGLDAPGDA----------LLVKTYEGRHGYDVQDVAIAHDNSKFASCGRDKAVFLWDVPTAKVIRKFEGHEHSVNCVRYNGDSAVLLSGSYDKTIRAWDMRARNAYLPIQVIDDFKDSVTSMVV--SDHEITAGCVDGIVRTFDLRAGMVYREHIEEPVVSVSLSPDARFLLASCLDGSIRLIEKESGQETKRYQGHRMDAYRIESCFSSDGAFVLSGSEDGKVYTWDLVTARIESF-HAHGKPIRALASHPELPLLVTGCIDGSAKVW 305
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Match: A0A8K1FM24_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM24_PYTOL) HSP 1 Score: 276 bits (705), Expect = 2.170e-88 Identity = 141/317 (44.48%), Postives = 199/317 (62.78%), Query Frame = 1 Query: 7 LPRVPVRRLVAGQGPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDPDKEGTGEVGAQELEQGLLVKSYAGPHGYEVLDVAVLGDNSQFVSCGEDKAAFLWDVSTGAVVRRMQGHEQRINACCFSTEGSVLFTASYDKTVRAWDMRSRNRS-PIQTLEGCKDSATSVSATPSGDELVVGCVDGKVRTYDLRAARVHEDEVHAPVTHASVSHDGNCLLVTCLGGVVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVHIWDIVEAKVTRLLKHHTRPVCSTSYHPSEAMLLTASYDGSAVLWTS 954 +P VR L GP VRF G Y + GQD+T+RL+NPHR +++G G LL+K+Y G HGY+V DVA+ DNS+F SCG DKA F+WDV TG V+R+ +GH+Q +N ++ +GSVL + SYDKTVR WD+R+RN PIQTL+ KDS TS+ S E+V GCVDG VRT+DLRA +V D++ PV ++S D LL + L G +RL+++ SG+++ +Y GH SY++E +V+SGSEDG + WD+V ++ + H +PV + + HP EAML+T GS +W + Sbjct: 5 VPSQCVRVLRGHHGPVNAVRFNE-KGTYVMTCGQDKTIRLWNPHRDGLEQQGDG----------LLIKTYQGRHGYDVQDVAIAADNSKFASCGRDKAVFMWDVPTGKVIRKFEGHDQSVNCVRYNADGSVLLSGSYDKTVRCWDIRARNSYLPIQTLDEFKDSVTSLVV--SDHEIVAGCVDGVVRTFDLRAGKVFRDQIDEPVVSIALSTDRQQLLASSLDGSLRLIDRGSGTEMKSYRGHRIDSYKIECAFTFDGGYVVSGSEDGQICSWDLVNGRM-QTFHAHGKPVRALACHPEEAMLVTGCVVGSVKVWVT 307 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17164.1 >prot_C-linearis_contig99.17164.1 ID=prot_C-linearis_contig99.17164.1|Name=mRNA_C-linearis_contig99.17164.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=319bp MDLPRVPVRRLVAGQGPCFVVRFTAGDGKYCLVAGQDRTVRLYNPHRGDPback to top mRNA from alignment at C-linearis_contig99:266515..269283+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig99.17164.1 ID=mRNA_C-linearis_contig99.17164.1|Name=mRNA_C-linearis_contig99.17164.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2769bp|location=Sequence derived from alignment at C-linearis_contig99:266515..269283+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig99:266515..269283+ >mRNA_C-linearis_contig99.17164.1 ID=mRNA_C-linearis_contig99.17164.1|Name=mRNA_C-linearis_contig99.17164.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1914bp|location=Sequence derived from alignment at C-linearis_contig99:266515..269283+ (Chordaria linearis ClinC8C monoicous)back to top |