mRNA_C-linearis_contig99.17160.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Match: D7G7V5_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V5_ECTSI) HSP 1 Score: 998 bits (2581), Expect = 0.000e+0 Identity = 559/780 (71.67%), Postives = 618/780 (79.23%), Query Frame = 1 Query: 1 TYDTPFTREIEPWGARTLVGVQPRHPDIPKVALESSKAQRNKRPPLRLSVVSYNVLADANSVRVRNCAQAVTNWGRRREILLKEIFSVRADVLCLQDVDVFHRWWGPQLTSAGYDSLFKQRTSRSAVHREGVVIAWKRDMFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALLALLQPWEGSDHPSGVCVVCTQLHDGEGHYGDAVRSLQARGLTRTTEAFNADFTLPIVLCGTMNCVPSSGTYHILCQGIEAQDPARPGAPGKPLVEPISTSAARVRWAAPQDNSISLSPAIDTYRLLWVPGGSRFLPGESLDAHEVDCVVYDFIETESGNVRSQQNPLRSCVVAGLSSGVAYEFRVLAINTLGEGPWSERSDPVRMPRMAGNEPEDKLLLGAASIKLLRTRELGQARRRAEERLADPRAYELRKLVKMDGLFDIEREHLHPFDSVSGLTPRYSDAMLHPDLANVRTDTGFPIIEPAGGQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCSLDEDQSVSLPLRVGGREKVADSRQHKTEGRPLSLSGMQMPADPSLPPTGKHMLESAKASGSHSSERCLEREQDVLLRLNTLNVSGVRSERQKHALGLRSAYMSYCSGGEPTFTALSDAVTGTVDYIFFSADCLLPVDVLSLPEMGSLVGRDIQQTEVIPVPGRGADWFRMPAGWQGGCGEXXXXXXXXXXXGYTGEWSPYLRENPRRVKHRIPNEVFPSDHLMLMATLAFCEARCPSTWR 2340 TYDTPFTRE EPWGARTLV VQP HPDIP V S R K+ LSVVSYNVLAD+NSVRVRNCA AVT+WGRRRE+LLKEIFSVRADVLCLQDVD FH+WW PQLTSAGYDSLFKQRTSR+A+HREGVVIAWKRD+FDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVAL+ LL+PW+ SDHPSG C+VCTQL + EG+ GDA+R LQA GLTR+ EAFN+DF+LPIV+CGTMNC PSSGTY ILC+GIEAQDPARPG PGKPLVEPISTSAARVRW AP D+S SLSPAIDTYRLLWVPGGSRFLPGES+DAHE CVVYD ++TESG VRS+QNPLR+ VV+GLSSGVAYEFRV AIN+LG+GPWSERS+PVRMP+MAGN+P DK+LLGAASIKLLR REL ARRRAEERLADPRAYELRKLVK++GL D+ E +HPF SVSG+TPRY+DA LHPDLANVRTDTGFP+I+ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S ED S S GG + + T G S + P LPP KA GS +RE+++LLRL++LNVSG RSERQKHALGLRSAYM++ SGGEP FT LSD + GTVDYIFFSADCLLP VLS+PEMGSLV RDIQQTE+ P PG A P+ WQG CGE Y GEWSPYLRENP RVKHRIPNE+FPSDHLMLMA L + E RC STWR Sbjct: 16 TYDTPFTRETEPWGARTLVSVQPHHPDIPAVDHRSDVKFRRKQ---TLSVVSYNVLADSNSVRVRNCAPAVTSWGRRREVLLKEIFSVRADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQAHGLTRSVEAFNSDFSLPIVMCGTMNCAPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWPAPSDDSESLSPAIDTYRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEPVRMPQMAGNDPVDKVLLGAASIKLLRKRELEDARRRAEERLADPRAYELRKLVKVEGLLDLGMEKIHPFGSVSGVTPRYTDAALHPDLANVRTDTGFPVIKAIEERRLSSGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLLDDDL-----SSLEDASAST---TGGFRNGSGEGRSDTSGVDTGES-VTRPTKSLLPP---------KACGSS------QREENILLRLDSLNVSGARSERQKHALGLRSAYMTHSSGGEPAFTMLSDTMVGTVDYIFFSADCLLPTQVLSIPEMGSLVRRDIQQTELSPAPGLWA-----PSEWQGECGEER----------YMGEWSPYLRENPLRVKHRIPNELFPSDHLMLMANLVYFEPRCSSTWR 753
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Match: A0A6H5L283_9PHAE (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L283_9PHAE) HSP 1 Score: 750 bits (1936), Expect = 2.580e-263 Identity = 418/629 (66.45%), Postives = 476/629 (75.68%), Query Frame = 1 Query: 454 NRLGEHEEDRSLAGKAATSDNVALLALLQPWEGSDHPSGVCVVCTQLHDGEGHYGDAVRSLQARGLTRTTEAFNADFTLPIVLCGTMNCVPSSGTYHILCQGIEAQDPARPGAPGKPLVEPISTSAARVRWAAPQDNSISLSPAIDTYRLLWVPGGSRFLPGESLDAHEVDCVVYDFIETESGNVRSQQNPLRSCVVAGLSSGVAYEFRVLAINTLGEGPWSERSDPVRMPRMAGNEPEDKLLLGAASIKLLRTRELGQARRRAEERLADPRAYELRKLVKMDGLFDIEREHLHPFDSVSGLTPRYSDAMLHPDLANVRTDTGFPIIEPAGGQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCSLDEDQSVSLPLRVGGREKVADSRQHKTEGRPLSLSGMQMPADPSLPPTGKHMLESAKASGSHSSERCLEREQDVLLRLNTLNVSGVRSERQKHALGLRSAYMSYCSGGEPTFTALSDAVTGTVDYIFFSADCLLPVDVLSLPEMGSLVGRDIQQTEVIPVPGRGADWFRMPAGWQGGCGEXXXXXXXXXXXGYTGEWSPYLRENPRRVKHRIPNEVFPSDHLMLMATLAFCEARCPSTWR 2340 ++LGEHEE+RSLAGKAATSDNVAL+ LL+PW+ SDHPSG C+VCTQL + EG+ GDA+R LQARGLTR+ EAFN+DF+LPIV+CGTMNCVPSSGTY ILC+GIEAQDPARPG PGKPLVEPISTSAARVRW+AP D S SLSPAIDTYRLLWVPGGSRFLPGE++DAHE CV YD ++ ESG VRS+QNPLR+ VV+GLSSGVAYEFRV AIN+LG+GPWSERS+PVRMP+MAGN+P D++LLGAASIKLLR REL ARRRAEERLA+PRAYELRKLVK++GL D+ E +HPF SVSG+TPRY+DA LHPDLANVRTDTGFP+I+ + XXXXXXXXXXXXXXXXXXXXXX CSLD S GG + + T G S + P SLPP KA GS RE+++LLRL +L+VSG RSERQKHALGLRSAYM++ SGGEP FT LSD + GTVDYIFFSADCLLP VLS+PEMGSLVGRDIQQT++ PVPG A P+ WQG CGE GY GEWSPYLRENP RVKHR+PNE+FPSDHLMLMA L + E RC STWR Sbjct: 8 DQLGEHEENRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDYSESLSPAIDTYRLLWVPGGSRFLPGETVDAHEAGCVEYDLVKAESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEPVRMPQMAGNDPVDRVLLGAASIKLLRKRELEDARRRAEERLANPRAYELRKLVKVEGLLDLGMEKIHPFGSVSGVTPRYTDASLHPDLANVRTDTGFPVIKAI--EERRMXXXXXXXXXXXXXXXXXXXXXXAGSHQTRSNDEQVTSSSTKGPLDDDLCTCSLD---GASASTTTGGFRNGSGEGRSDTSGAGAGES-VTRPTKSSLPP---------KACGSFP------REENILLRLESLDVSGARSERQKHALGLRSAYMTHSSGGEPAFTMLSDTMVGTVDYIFFSADCLLPTQVLSIPEMGSLVGRDIQQTDLSPVPGLWA-----PSEWQGECGEE----------GYMGEWSPYLRENPLRVKHRVPNEIFPSDHLMLMANLLYFEPRCSSTWR 600
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Match: A0A6H5L276_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L276_9PHAE) HSP 1 Score: 255 bits (651), Expect = 4.900e-77 Identity = 126/155 (81.29%), Postives = 134/155 (86.45%), Query Frame = 1 Query: 1 TYDTPFTREIEPWGARTLVGVQPRHPDIPKVALESSKAQRNKRPPLRLSVVSYNVLADANSVRVRNCAQAVTNWGRRREILLKEIFSVRADVLCLQDVDVFHRWWGPQLTSAGYDSLFKQRTSRSAVHREGVVIAWKRDMFDLFRSGEMELNRLG 465 TYDTPFTRE EPWGARTLV VQP HPDIP V S K+ LSVVSYNVLAD+NSVRVRNCA AVT+WGRRRE+LLKEIFSVRADVLCLQDVD FH+WW PQLTSAGYDSLFKQRTSR+A+HREGVVIAWKRD+FDLFRSGEMELNR G Sbjct: 16 TYDTPFTRESEPWGARTLVSVQPHHPDIPAVDHRSDIKFGRKQ---TLSVVSYNVLADSNSVRVRNCAPAVTSWGRRREVLLKEIFSVRADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRRG 167
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Match: W2QR66_PHYPN (Fibronectin type-III domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QR66_PHYPN) HSP 1 Score: 206 bits (525), Expect = 6.040e-54 Identity = 126/345 (36.52%), Postives = 180/345 (52.17%), Query Frame = 1 Query: 139 RLSVVSYNVLADANSVRVRN-----CAQAVTNWGRRREILLKEIFSVRADVLCLQDVDVFHRWWGPQLTSAGYDSLFKQRTSRSAVH-----REGVVIAWKRDMFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALLALLQPWEGSDHPSGVCVVCTQLHDGEGHYGDAVRSLQARGLTRTTEAFNADFTLPIVLCGTMNCVPSSGTYHILCQGIEAQDPARPGAPGKPLVEPISTSAARVRWAAPQDNSISLSPAIDTYRLLWVPGGSRFLPGESLDAHEVDCVVYDFIETESGNVRSQQNP---LRSCVVAGLSSGVAYEFRVLAINTLGEGPWSERSDP 1134 ++SV+SYNVL+ + R++ + A+ N +RRE LL+EI S AD++CLQ+VD + WW +L AGYDS++ + + EG+V A+++ F LFRS E+ LN L + D +LA +A D +AL+ LQPWE S PS +CVV TQL G + VR LQ L R FNADF LP++L GT N VPS+ YH + G P P APG+P+++ ++S+ R+ W PQ + S +P S E V + SG + P +S V LS+ + Y+FRV+A N G G WS+ S P Sbjct: 33 KVSVLSYNVLSQMGARRMQRRGKSYVSAAILNIRQRRERLLREILSYDADIMCLQEVDEYDDWWAAELAIAGYDSIYATSAASDSTTVTKDIDEGLVTAFRKSTFQLFRSAEVHLNDLCANINDANLAARAK-QDKIALMVCLQPWETSTLPSALCVVNTQLASGATSELERVRVLQTEYLCRQIAVFNADFQLPVLLAGTFNAVPSNDVYHTILTGRRRPVPEAPAAPGRPVIDDPTSSSLRISWEPPQPSLTSTTP--------------------STPVLEYKIAVKNCTSKASGFLYELSVPDGAAKSFTVTSLSASMTYQFRVMARNAYGWGYWSQPSAP 356
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Match: A0A329SCY1_9STRA (Fibronectin type-III domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SCY1_9STRA) HSP 1 Score: 204 bits (518), Expect = 5.520e-53 Identity = 128/345 (37.10%), Postives = 181/345 (52.46%), Query Frame = 1 Query: 139 RLSVVSYNVLADANSVRVRNCAQ-----AVTNWGRRREILLKEIFSVRADVLCLQDVDVFHRWWGPQLTSAGYDSLFKQRTSRSAVH-----REGVVIAWKRDMFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALLALLQPWEGSDHPSGVCVVCTQLHDGEGHYGDAVRSLQARGLTRTTEAFNADFTLPIVLCGTMNCVPSSGTYHILCQGIEAQDPARPGAPGKPLVEPISTSAARVRWAAPQDNSISLSPAIDTYRLLWVPGGSRFLPGESLDAHEVDCVVYDFIETESGNVRSQQNP---LRSCVVAGLSSGVAYEFRVLAINTLGEGPWSERSDP 1134 ++SV++YN+L+ + R++ + A N +RRE LL+EI S AD++CLQ+VD + WW +L AGYDS++ + + +G+V A+++ F LFRS E+ LN L + D +LA +A D +ALL LQPWE S PS +CVV TQL G + VR LQ L R FNADF LPIVL GT N PSS YH + G P P APG+P+++ ++S+ RV W PQ + SL+P S E V + + SG + P +S +V LS+ + Y+FRV+A N G G WS+ S P Sbjct: 33 KVSVLTYNMLSQMGARRMQRRGKSYVGAATLNIRQRRERLLREILSYDADIMCLQEVDEYDDWWAAELAIAGYDSIYATSATPDSTTVAKDIDDGLVTAFRKSTFQLFRSTELHLNDLCANINDANLAARAK-QDKLALLVCLQPWETSALPSALCVVNTQLAAGATPELERVRVLQTEYLCRQLTVFNADFQLPIVLAGTFNATPSSDVYHTILTGRRRPVPEAPAAPGRPVIDDPTSSSLRVSWEPPQRSLTSLTP--------------------STPILEYKIAVKNCVSQASGFLYELPVPDGAAQSFIVTSLSASMTYQFRVMAGNEYGWGDWSQPSAP 356
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Match: A0A662Y7A2_9STRA (Fibronectin type-III domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y7A2_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.790e-52 Identity = 136/348 (39.08%), Postives = 191/348 (54.89%), Query Frame = 1 Query: 139 RLSVVSYNVLADANSVRVRNCAQ-----AVTNWGRRREILLK----EIFSVRADVLCLQDVDVFHRWWGPQLTSAGYDSLFKQR---TSRSAVHR--EGVVIAWKRDMFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALLALLQPWEGSDHPSGVCVVCTQLHDGEGHYGDAVRSLQARGLTRTTEAFNADFTLPIVLCGTMNCVPSSGTYHILCQGIEAQDPARPGAPGKPLVEPISTSAARVRWAAPQDNSISLSPA--IDTYRLLWVPGGSRFLPGESLDAHEVDCVVYDFIETESGNVRSQQNPLRSCVVAGLSSGVAYEFRVLAINTLGEGPWSERSDP 1134 ++SV++YNVL+ + R++ + A+ N +RRE+LL+ E+ S AD++CLQ++D + WW QL AGYDS++ TS +A+ +G+V A++++ F LFRS E+ LN + ++ D +LA +A DNVALL LQPWE S PS +CVV TQL G + VR LQA L R T F+ADF LPIVL GT N PSS YH + G P AP +P+V+ S S+ +V W P +S SL P+ I Y++ SR + HE+ V D T S VV LS+ + Y+ RV+A N G GPWS+ S P Sbjct: 34 KVSVLTYNVLSQMGARRLQRGGKSYVNPAILNIRQRRELLLRHSPSEMLSYDADIMCLQEMDEYDDWWAAQLALAGYDSVYASACPSTSAAALSEIDDGLVTAFRKETFQLFRSSEVHLNDVCDNITDLNLAARAK-QDNVALLLCLQPWESSALPSALCVVNTQLAAGPTPQMELVRVLQAEYLCRQTAIFSADFQLPIVLAGTFNATPSSDVYHTIITGRRRPVAEAPAAPDRPVVDDPSPSSLKVTWKPPTPSSTSLVPSAPILEYKVAVKNCASRSMGF----MHELS--VADSSAT-------------SFVVPSLSANMTYQLRVMARNEFGWGPWSDPSAP 361
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Match: G4ZS96_PHYSP (Fibronectin type-III domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZS96_PHYSP) HSP 1 Score: 202 bits (513), Expect = 3.290e-52 Identity = 131/345 (37.97%), Postives = 181/345 (52.46%), Query Frame = 1 Query: 139 RLSVVSYNVLADANSVRVRN-----CAQAVTNWGRRREILLKEIFSVRADVLCLQDVDVFHRWWGPQLTSAGYDSLFKQRT--SRSAVHRE---GVVIAWKRDMFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALLALLQPWEGSDHPSGVCVVCTQLHDGEGHYGDAVRSLQARGLTRTTEAFNADFTLPIVLCGTMNCVPSSGTYHILCQGIEAQDPARPGAPGKPLVEPISTSAARVRWAAPQDNSISLSPAIDTYRLLWVPGGSRFLPGESLDAHEVDCVVYDFIETESGNVRSQQNP---LRSCVVAGLSSGVAYEFRVLAINTLGEGPWSERSDP 1134 ++SV++YNVL+ + R++ + A+ N +RR+ +L+EI S AD++CLQ+VD + WW +L +AGYDS++ S +AV +E G+V A+++ F LFRS E+ LN L + D +LA +A D +ALL LQPWE S PS +CV TQL G + VR LQ L R FNADF LPIVL GT N PSS YH + G P P AP +P V+ + S+ RV W PQ + SL+ S E V + SG + P +S VVA LS+ + Y+FRV+A N G G WS+ S P Sbjct: 33 KVSVLTYNVLSQMGARRMQRGGKSYVSAAILNIRQRRDRVLREILSYDADIMCLQEVDEYDDWWAVELATAGYDSIYATSAAPSSAAVAKEIDEGLVTAFRKSTFQLFRSSEVHLNDLCANINDPNLAARAK-QDKLALLVSLQPWETSALPSALCVANTQLAAGATPEMERVRVLQTEYLCRQVAVFNADFQLPIVLAGTFNATPSSDVYHTILTGRRRPVPEAPAAPSRPEVDEPTASSLRVNWQPPQPSVTSLT--------------------SSAPVLEYKVAVKNCASKTSGFLYELSVPDGAAKSFVVASLSANMTYQFRVMARNEHGWGHWSQPSAP 356
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Match: A0A421FB39_9STRA (Fibronectin type-III domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FB39_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.910e-50 Identity = 124/344 (36.05%), Postives = 185/344 (53.78%), Query Frame = 1 Query: 139 RLSVVSYNVLADANSVRVRN-----CAQAVTNWGRRREILLKEIFSVRADVLCLQDVDVFHRWWGPQLTSAGYDSLFKQRTS-RSAVH----REGVVIAWKRDMFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALLALLQPWEGSDHPSGVCVVCTQLHDGEGHYGDAVRSLQARGLTRTTEAFNADFTLPIVLCGTMNCVPSSGTYHILCQGIEAQDPARPGAPGKPLVEPISTSAARVRWAAPQDNSISLSPAIDT--YRLLWVPGGSRFLPGESLDAHEVDCVVYDFIETESGNVRSQQNPLRSCVVAGLSSGVAYEFRVLAINTLGEGPWSERSDP 1134 ++SV++YNVL+ + +++ + A+ N +RRE LL+EI S AD++CLQ++D + WW +L +AGYDS++ + +SAV EG+V A+++ F LFRS E+ LN L + D +LA +A D +AL+ +QPWE S PS +CVV TQL G + VR LQ L R FNADF LP+VL GT N PSS YH + G P P AP +P ++ ++S+ RV W P ++ SL+P++ Y++ SR + G + D F+ T LS+ + Y+FR++A N G G WS+ S P Sbjct: 31 KVSVLTYNVLSQMGARKMQRGGKSYVSTAILNIRQRREKLLREILSYDADIMCLQEIDEYDDWWAAELATAGYDSIYATSAAPQSAVVVNAIDEGLVTAFRKSTFQLFRSEEVHLNDLCANINDPNLAARAR-QDRLALMVCVQPWETSALPSALCVVNTQLAAGPTPEMELVRVLQTEHLCRQLAVFNADFQLPVVLAGTFNATPSSDVYHTILTGRRRPVPEAPTAPSRPNIDEETSSSLRVSWQPPSPSATSLTPSVPILEYKVAVKNCASRSM-GFLYELSVPDGTATSFVTTS------------------LSADMMYQFRIMARNEHGWGHWSQPSTP 354
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Match: A0A2R5GWN2_9STRA (Centrosomal protein of 19 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWN2_9STRA) HSP 1 Score: 183 bits (465), Expect = 7.450e-45 Identity = 120/347 (34.58%), Postives = 174/347 (50.14%), Query Frame = 1 Query: 106 SKAQRNKRPPLRLSVVSYNVLADA--NSVRVRNCAQAVTNWGRRREILLKEIFSVRADVLCLQDVDVFHRWWGPQLTSAGYDSLFKQRTSRSAVHREGVVIAWKRDMFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALLALLQPWEGSDHPSGVCVVCTQLHDGEGHYGDAVRSLQARGLTRTTEAFNADFTLPIVLCGTMNCVPSSGTYHILCQGIEAQDPARPGA-PGKPLVEPISTSAARVRWAAPQDNSISLSPAIDTYRLLWVPGGSRFLPGESLDAHEVDCVVYDFIETESGNVRSQQNPLRSCVVAGLSSGVAYEFRVLAINTLGEGPWSERSDPV 1137 S A + R R V+SYNVLA N + C NW +R++ LL E+ + + DVLCLQ+VD F WW P+L AGYD ++ QR R H++GV + R F LFRS ++ N G + + + DNV ++ +QPWE SDHPS + V QL +AV+ Q L RT E FNADF LP+++CG+ N + S Y I+ +G RPG +P + ++ S RVRW AP AI Y + GG+ + + V +D + NV +GLS+G+ YEF V A++ +G+G +S+ + PV Sbjct: 54 SGATNHSRSGPRFKVLSYNVLAQRKLNGPKYGYCDGGDINWHQRKKRLLDEVLAHKPDVLCLQEVDNFDLWWQPRLAEAGYDGIYCQRGRR---HKDGVATFFSRSKFQLFRSETIDFNDAGRFLGEAKPSSRLQ-QDNVGVIVAIQPWEDSDHPSALLVSNVQLVTPTDPDLEAVQRKQVLMLLRTVERFNADFQLPVLMCGSFNFLQQSDLYTIVTRGKFPFQLTRPGTIDERPEAKVLAHSHVRVRWKAPSSGDA----AIQGYVIRRRCGGNTSRGFDDPAFFPLSAVEHDGLVWREANV------------SGLSAGLTYEFVVAAVSAVGQGDFSQPTPPV 380
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Match: A0A2D4BK15_PYTIN (Fibronectin type-III domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK15_PYTIN) HSP 1 Score: 179 bits (454), Expect = 1.750e-44 Identity = 127/344 (36.92%), Postives = 174/344 (50.58%), Query Frame = 1 Query: 139 RLSVVSYNVLADANSVRV-RNCAQAVTN----WGRRREILLKEIFSVRADVLCLQDVDVFHRWWGPQLTSAGYDSLFKQRTSRSAVHREGVVIAWKRDMFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALLALLQPWEGSDHPSGVCVVCTQLHDGEGHYGDAVRSLQARGLTRTTEAFNADFTLPIVLCGTMNCVPSSGTYHILCQGIEAQDPARPGAPGKPLVEPISTSAARVRWAAPQDNSISLSPAIDTYRLLWVPGGSRFLPGESLDAHEVDCVVYDFIETESGNVRSQQNPLRSCVVAGLSSGVAYEFRVLAINTLGEGPWSERSDPVRMPRMA 1155 +LSV+SYNVL+ + R+ R A V + + RR++LL+EI S ADVLCLQ+ D + +W QLT GYDS+F S +G++IA++R+ F LFRS ++LN + D +L K D + LL LQPWE S PS VCVV TQL H + VR LQ L R NADF LPIVL G+ N +P S YH+L G P+ P +P + S+ R+ W+AP +S P + Y++ S L + HE+D E V LS+ Y+FRV A N +G GP+S+ S P+ P A Sbjct: 25 KLSVLSYNVLSQMGARRLLRGDAAYVDSSLLTFMHRRDVLLREILSYDADVLCLQEADDYDDFWSVQLTDTGYDSVFASHPS--GTRDDGLLIAFRRERFQLFRSETIDLNAVATLATDANLVAKCR-QDCIXLLLQLQPWERSRLPSAVCVVTTQLASDPSH--ELVRVLQTELLCREIARVNADFQLPIVLTGSFNALPGSDVYHVLLTGRRRPRPSAPQQVERPEPRDATPSSVRLTWSAPPVSSGD-GPILG-YKIAVKNCTSATL---GFNMHEIDVXGAXVCEH---------------TVTMLSANTPYQFRVAARNAVGLGPFSQPSWPITTPATA 343 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17160.1 >prot_C-linearis_contig99.17160.1 ID=prot_C-linearis_contig99.17160.1|Name=mRNA_C-linearis_contig99.17160.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=781bp TYDTPFTREIEPWGARTLVGVQPRHPDIPKVALESSKAQRNKRPPLRLSVback to top mRNA from alignment at C-linearis_contig99:249225..252112+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig99.17160.1 ID=mRNA_C-linearis_contig99.17160.1|Name=mRNA_C-linearis_contig99.17160.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2888bp|location=Sequence derived from alignment at C-linearis_contig99:249225..252112+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig99:249225..252112+ >mRNA_C-linearis_contig99.17160.1 ID=mRNA_C-linearis_contig99.17160.1|Name=mRNA_C-linearis_contig99.17160.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4686bp|location=Sequence derived from alignment at C-linearis_contig99:249225..252112+ (Chordaria linearis ClinC8C monoicous)back to top |