mRNA_C-linearis_contig98.17129.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Match: D8LJU0_ECTSI (Orotidine-5'-phosphate decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU0_ECTSI) HSP 1 Score: 789 bits (2038), Expect = 7.060e-279 Identity = 438/535 (81.87%), Postives = 471/535 (88.04%), Query Frame = 1 Query: 178 MATFASQPGHGFFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAFCLRIIEATSSVALAYKPNAAFFEAFGAEGVAALKEVIAAVPQDIPVLLDAKRGDIGTTAAAYASAAFDELGAHAITLNAYMGSDTVTPFLKDPAKGVFVLCKTSNQSSNELQTLAVGSSGSGKALFEEVASLCESWNGDNNVGLVVGATDASALRRARAAAPGLWILAPAGVGAQGGDLDEACSAALDDRGMGLLVPVSRGISRADDPAAEAATLRDRINGARARCKDRAAXXXXXXXXXXXFSSAVLLPYQREFIELSLSQKVLKFADFSGEGEGEPYFTLKSGRHSPYFFNAGLFSKGSALAKLGRFYAQAIVNHRPLLEFDVVFGPAYKGIPLGAAVAYTLADRHGLEVGFSYNRKEPKDHGEGGLLVGEDLQGKRVLVVDDVITAGTAIREAIDMLTEEGATLAGVVIALDRQEVTGAEDALASSSAVQQVEEAFGVPVVSVVGMSHLTEYMASQGDAA-GASAQALEAMRAYRAKYGVG 1779 MA+FASQ GHGFFDKIA R E+VDSLLMVGLDPH++ELGEGN +A GAKAFCLRII +TS+VA+ YKPNAAFFEAFGAEGVAALKEVIAAVP+ IPVLLDAKRGDIGTTAAAYAS F+ELGAHAITLNAYMG DTV PFLKDPA+GVFVLCKTSN+SSNELQTL VG+SG KALFEEVASLC+SWN DNNVGLVVGATD AL R RAAAP LWILAP GVGAQGGDLDEACSAALD+RGMGLLVPVSRGISRADDPAAEA L+DRIN AR RC D+ XXXXXXXX + LLPYQREFIE S+S KVLKF DFS EG GE +F LKS R SPYFFNAGLF KGSALAKLG+FYA+AI+N RP LEFDVVFGPAYKGIPLGAAVAYTLAD H ++GFSYNRKEPKDHGEGGLLVGEDL+GKRVLVVDDVITAGTAIREA +L +EGAT AGVVIALDRQE TGAE + ++SAVQQVEE GVPVVSVVGMSHLTEYMAS+ DA GA+AQALEAMRAYRAKYGVG Sbjct: 1 MASFASQSGHGFFDKIASRVEEVDSLLMVGLDPHAAELGEGNNHAAGAKAFCLRIIASTSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGTFEELGAHAITLNAYMGVDTVDPFLKDPARGVFVLCKTSNRSSNELQTLPVGNSG--KALFEEVASLCQSWNKDNNVGLVVGATDPEALARVRAAAPDLWILAP-GVGAQGGDLDEACSAALDERGMGLLVPVSRGISRADDPAAEAVALKDRINAARKRCTDQRKEPAXXXXXXXXXA---LLPYQREFIEFSMSHKVLKFGDFS-EG-GEAFFELKSKRQSPYFFNAGLFCKGSALAKLGKFYAEAIMNARPRLEFDVVFGPAYKGIPLGAAVAYTLADLHDRDIGFSYNRKEPKDHGEGGLLVGEDLKGKRVLVVDDVITAGTAIREAFGILRKEGATPAGVVIALDRQEKTGAESVIGTTSAVQQVEEECGVPVVSVVGMSHLTEYMASKEDATPGANAQALEAMRAYRAKYGVG 527
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Match: A0A835Z0K1_9STRA (Orotidine-5'-phosphate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K1_9STRA) HSP 1 Score: 601 bits (1549), Expect = 5.080e-205 Identity = 340/536 (63.43%), Postives = 399/536 (74.44%), Query Frame = 1 Query: 172 KRMAT-FASQPGHGFFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAFCLRIIEATSSVALAYKPNAAFFEAFGAEGVAALKEVIAAVPQDIPVLLDAKRGDIGTTAAAYASAAFDELGAHAITLNAYMGSDTVTPFLKDPAKGVFVLCKTSNQSSNELQTLAVGSSGSGKALFEEVASLCESWNGDNNVGLVVGATDASALRRARAAAPGLWILAPAGVGAQGGDLDEACSAALDDRGMGLLVPVSRGISRADDPAAEAATLRDRINGARARCKDRAAXXXXXXXXXXXFSSAVLLPYQREFIELSLSQKVLKFADFSGEGEGEPYFTLKSGRHSPYFFNAGLFSKGSALAKLGRFYAQAIVNHRPLLEFDVVFGPAYKGIPLGAAVAYTLADRHGLEVGFSYNRKEPKDHGEGGLLVGEDLQGKRVLVVDDVITAGTAIREAIDMLTEEGATLAGVVIALDRQEVTGAEDALASSSAVQQVEEAFGVPVVSVVGMSHLTEYMASQGDAAGASAQALEAMRAYRAKYGV 1776 KR T FAS G GFFDK+A RA +DSLL VGLDPH +L + + A GA AFC R+I+AT+ VALAYKPNAAFFEAFGAEG+AALK+ I P +IP++LDAKRGDIGTTA AYA AAF ELGA +IT+NAYMG+DTV PF+KDP++GVFVLCKTSN SS E+Q+L + GS A+FE+VA+L + WN NNVGLVVGATDA ALRRARAAAPGLWILAP G+GAQGGDLD AC+A LD G+GLLVP+SRGIS A DPAA A RD IN AR +A + + PYQ++FI+ +LSQ VL+F F TLKSGR SPYFFNAGLFS G ALAKLGRFYAQAIV+ L+F VVFGPAYKGIPLGAAVA+TL + HG +V ++YNRKE KDHGEGGLLVG D++GKRVL+VDDVITAGTAIREA+DMLT GA AGVVIALDR E G + SAVQQVE+ FG+PVVSVV ++H+ Y+ + D A L+A+ YR KYGV Sbjct: 16 KRQGTAFASLAGSGFFDKLAARARAIDSLLCVGLDPHVGQLTDKS--ASGALAFCKRLIDATADVALAYKPNAAFFEAFGAEGMAALKDYI---PAEIPIVLDAKRGDIGTTAQAYADAAFTELGAESITINAYMGTDTVAPFIKDPSRGVFVLCKTSNPSSKEVQSLRLA--GSNLAVFEQVAALAQGWNTANNVGLVVGATDADALRRARAAAPGLWILAP-GIGAQGGDLDAACAAGLDANGLGLLVPISRGISAAKDPAAAAREFRDNINKARTAAAAASADQVCE-------QAEGMAPYQKDFIDFALSQNVLRFGSF----------TLKSGRQSPYFFNAGLFSTGQALAKLGRFYAQAIVDAGDKLDFTVVFGPAYKGIPLGAAVAHTLYEGHGSDVEYTYNRKEKKDHGEGGLLVGADVKGKRVLIVDDVITAGTAIREAMDMLTAAGAVPAGVVIALDRMEKGGGSEL----SAVQQVEKEFGIPVVSVVCLTHIASYLTAGQDPA-----LLQAITEYRDKYGV 517
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Match: A0A6T5PNF4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5PNF4_HETAK) HSP 1 Score: 520 bits (1340), Expect = 7.700e-174 Identity = 313/535 (58.50%), Postives = 378/535 (70.65%), Query Frame = 1 Query: 190 ASQPGHGFFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAFCLRIIEATSSVALAYKPNAAFFEAFGAEGVAALKEVIAAVPQDIPVLLDAKRGDIGTTAAAYASAAFDELGAHAITLNAYMGSDTVTPFLKDPAKGVFVLCKTSNQSSNELQTLAVGSSGSGKALFEEVASLCES-WNGDNNVGLVVGATDASALRRARAAAPGLWILAPAGVGAQGGDLDEACSAALDDRGMGLLVPVSRGISRADDPAAEAATLRDRINGAR----ARCKDRAAXXXXXXXXXXXFSSAVLLPYQREFIELSLSQKVLKFADFSGEGEGEPYFTLKSGRHSPYFFNAGLFSKGSALAKLGRFYAQAIVNHRPLLEFDVVFGPAYKGIPLGAAVAYTLADRHGLEVGFSYNRKEPKDHGEGGLLVGEDLQGKRVLVVDDVITAGTAIREAIDMLTEEGATLAGVVIALDRQEVTGAEDALASSSAVQQVEEAFGVPVVSVVGMSHLTEYMASQGDAAGASAQ-ALEAMRAYRAKYGV 1776 +S+ FF +I R + +DSLL VGLDPH SEL E A GA FC II+AT+SVA+ YKPNAAFFEA GAEGVAA+K VIAAVP++IPVLLDAKRGDI +TA AYA+AAFDELGA AITL+ YMG D+V PFL+ P +G FVLCKTSN ++ +LQTL + + L+EEVA+L S WN D+ VGLVVGATDA+AL RARAAAP +WILAP GVG QGGDL+ AC A LD G GLLVPVSRGISRA D AA A R++IN AR A+ ++ AA +LPYQ EFI+ +L Q+VL+F F TLKSGR SPYFFNAGLFS G AL +LG FYA+AIV R ++FDV+FGPAYKGIPL AVA LA +G+ F YNRKEPKDHGEGG LVG ++G+RVLVVDDVITAGTAIREA+ L + G AGV +ALDRQE T E ++SAVQ+V+ + +PVVSVVG++HL ++ + G Q L+A+ AYR +YGV Sbjct: 3 SSEAPVSFFQRIRNRVKAIDSLLCVGLDPHLSELEEKT--AEGAFNFCKDIIDATASVAVCYKPNAAFFEALGAEGVAAMKRVIAAVPEEIPVLLDAKRGDIASTAEAYAAAAFDELGADAITLSPYMGFDSVRPFLR-PGRGAFVLCKTSNPTAGDLQTLPLAKKR--RLLYEEVAALVASAWNADDAVGLVVGATDAAALARARAAAPAVWILAP-GVGFQGGDLEAACLAGLDAEGGGLLVPVSRGISRAPDKAAAAEGFREQINAARRKKIAQTQECAA-------------GEAILPYQEEFIQFALKQEVLRFGQF----------TLKSGRVSPYFFNAGLFSSGEALLRLGGFYAEAIV--RSGVQFDVLFGPAYKGIPLVTAVAMCLASDYGIYKDFVYNRKEPKDHGEGGTLVGAAMEGRRVLVVDDVITAGTAIREAMGYLDQAGGVAAGVCLALDRQEKTREEG---TASAVQEVQNEYNIPVVSVVGLNHLAAFLKN-----GTHGQDTLDAVNAYRQRYGV 498
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Match: A0A7S2SUH6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUH6_9STRA) HSP 1 Score: 522 bits (1344), Expect = 8.970e-174 Identity = 307/535 (57.38%), Postives = 371/535 (69.35%), Query Frame = 1 Query: 193 SQPGHGFFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAFCLRIIEATSSVALAYKPNAAFFEAFGAEGVAALKEVIAAVPQDIPVLLDAKRGDIGTTAAAYASAAFDELGAHAITLNAYMGSDTVTPFLKDPAKGVFVLCKTSNQSSNELQTLAV-GSSGSGKALFEEVASLCES-WNGDNNVGLVVGATDASALRRARAAAPGLWILAPAGVGAQGGDLDEACSAAL---DDRG--MGLLVPVSRGISRADDPAAEAATLRDRINGARARCKDRAAXXXXXXXXXXXFSSAVLLPYQREFIELSLSQKVLKFADFSGEGEGEPYFTLKSGRHSPYFFNAGLFSKGSALAKLGRFYAQAIVNHRPLLEFDVVFGPAYKGIPLGAAVAYTLADRHGLEVGFSYNRKEPKDHGEGGLLVGEDLQGKRVLVVDDVITAGTAIREAIDMLTEEGATLAGVVIALDRQEVTGAEDALA-SSSAVQQVEEAFGVPVVSVVGMSHLTEYMASQGDAAGASAQALEAMRAYRAKYG 1773 S FF+K+A RA VDSLL VGLDPH EL E + A A AFC R+I+ TS VA AYKPNAAFFE FG+EGV AL+EV+A VP +IPVLLDAKRGDIG+T+ AYA A+F GA A+TLN YMGSD++ PFL+DPA+ F+LCKTSN SN+LQTL V GS G + LFE+VA L E+ WN NVGLVVGATD A+RR RA AP LWILAP GVGAQGG+L AC A L D G G+L PVSRGISRA+ P+ A LR +IN AR +++ + L YQ++FIE +++ VLKF +F TLKSGR SPYFFNAGLF G +A LG FYAQA+ + L +FDV+FGPAYKGIPLG AVA LA G +V +YNRKE KDHGEGG+LVG LQGKRVL+VDDVITAGTAIREA+ +++ G ++AGVVIALDRQEVT + A A S SAVQ VE G PVVS+VG++HL +++S G + +A A+ +YR KYG Sbjct: 31 SMASERFFEKLAARAAAVDSLLCVGLDPHVKELSEPSPAA--AAAFCKRLIDETSGVAAAYKPNAAFFEQFGSEGVKALEEVVAMVPPEIPVLLDAKRGDIGSTSEAYAKASFTACGAGAVTLNGYMGSDSLDPFLRDPAQAAFILCKTSNPGSNDLQTLPVRGSDGQERMLFEQVALLAETRWNEQKNVGLVVGATDIEAIRRVRAVAPSLWILAP-GVGAQGGELGAACEAGLFLHPDTGHTTGILFPVSRGISRAESPSVAAEALRVQINAARRAFVEKSTSTAAEAAPV----APTLASYQKQFIEFAIAHSVLKFGEF----------TLKSGRLSPYFFNAGLFCSGKTMAALGSFYAQAVQANTDL-QFDVIFGPAYKGIPLGTAVAMALATGFGRDVQVAYNRKEKKDHGEGGVLVGASLQGKRVLIVDDVITAGTAIREAVQIVSGAGGSIAGVVIALDRQEVTSSASASAPSESAVQSVEREVGCPVVSIVGLTHLQAFLSSSGQDSAVAA----AVTSYREKYG 543
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Match: A0A5D6XZZ5_9STRA (OMPdecase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZZ5_9STRA) HSP 1 Score: 517 bits (1332), Expect = 1.070e-172 Identity = 306/527 (58.06%), Postives = 370/527 (70.21%), Query Frame = 1 Query: 211 FFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAFCLRIIEATSSVALAYKPNAAFFEAFGAEGVAALKEVIAAVPQDIPVLLDAKRGDIGTTAAAYASAAFDELGAHAITLNAYMGSDTVTPFLKD-PAKGVFVLCKTSNQSSNELQTLAVGSSGSGKALFEEVASLCESWNGDNNVGLVVGATDASALRRARAAAPGLWILAPAGVGAQGGDLDEACSAALDDRGMGLLVPVSRGISRADDPAAEAATLRDRINGARARCKDRAAXXXXXXXXXXXFSSAVLLPYQREFIELSLSQKVLKFADFSGEGEGEPYFTLKSGRHSPYFFNAGLFSKGSALAKLGRFYAQAIVNHRPLLEFDVVFGPAYKGIPLGAAVAYTLADRHGLEVGFSYNRKEPKDHGEGGLLVGEDLQGKRVLVVDDVITAGTAIREAIDMLTEEGATLAGVVIALDRQEVTGAEDALASSSAVQQVEEAFGVPVVSVVGMSHLTEYMASQGDAAGASAQALEAMRAYRAKYGVG*SP 1788 FF ++ RA+ +SLL VGLDPH SEL E A A+ FCLR+IE T + A A+KPNAAFFEAFGAEGVAAL VI AVP IPV+LDAKRGDI TTAAAYA+AAF++L AHAITL YMG+D++ PF++ P +G FVLCKTSN S+N+ QTL V + +ALFEEVA C WN ++NVGLVVGATD ALRR RA AP LWILAP G+GAQGG+L+EA SA L G GLLVPVSRGIS+A DP A A +LRD IN RA AA SS+ + + EFI+ +LS VLKF F TLKSGR SPYFFNAGLF G AL +LGRFYAQAI + FDV+FGPAYKGI L AAVA A+ + +++ F+YNRKE KDHGEGG+LVG D+ GKRVL++DDVITAGTAI EA+D+L AT+AGV I+LDRQE A DA SA+ +V EAFG+PVVS+ + L ++ + AAGA+A L ++AYRA+YGV +P Sbjct: 3 FFAQLRARADVANSLLCVGLDPHVSELPEPT--AAAAQQFCLRLIEQTHAAAAAFKPNAAFFEAFGAEGVAALHAVIKAVPAGIPVVLDAKRGDISTTAAAYATAAFEQLAAHAITLAPYMGADSIEPFVRGRPERGCFVLCKTSNPSANDFQTLRVAPA---RALFEEVALKCAQWNAEDNVGLVVGATDVEALRRVRAVAPTLWILAP-GIGAQGGNLEEAVSAGLSADGYGLLVPVSRGISKAADPKAAAESLRDAINAVRAATVAVAA------------SSSAAVSRESEFIKFALSFGVLKFGAF----------TLKSGRQSPYFFNAGLFRTGRALGQLGRFYAQAI--RASGVHFDVLFGPAYKGITLAAAVAIAYAELYDVDLPFAYNRKEAKDHGEGGVLVGADMTGKRVLIIDDVITAGTAIAEAMDILKHTNATVAGVCISLDRQEKVSATDA---RSAIDRVREAFGIPVVSIANLDALVAFLEA-APAAGANAAYLPIIKAYRAEYGVTHAP 495
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Match: A0A8K1CV14_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CV14_PYTOL) HSP 1 Score: 508 bits (1308), Expect = 4.920e-169 Identity = 286/524 (54.58%), Postives = 364/524 (69.47%), Query Frame = 1 Query: 211 FFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAFCLRIIEATSSVALAYKPNAAFFEAFGAEGVAALKEVIAAVPQDIPVLLDAKRGDIGTTAAAYASAAFDELGAHAITLNAYMGSDTVTPFLKD-PAKGVFVLCKTSNQSSNELQTLAVGSS-GSGKALFEEVASLCESWNGDNNVGLVVGATDASALRRARAAAPGLWILAPAGVGAQGGDLDEACSAALDDRGMGLLVPVSRGISRADDPAAEAATLRDRINGARARCKDRAAXXXXXXXXXXXFSSAVLLPYQREFIELSLSQKVLKFADFSGEGEGEPYFTLKSGRHSPYFFNAGLFSKGSALAKLGRFYAQAIVNHRPLLEFDVVFGPAYKGIPLGAAVAYTLADRHGLEVGFSYNRKEPKDHGEGGLLVGEDLQGKRVLVVDDVITAGTAIREAIDMLTEEGATLAGVVIALDRQEVTGAEDALASSSAVQQVEEAFGVPVVSVVGMSHLTEYMASQGDAAGASAQALEAMRAYRAKYGV 1776 FF + +R +DSLL +GLDPH EL E A A+AFCLR+IEAT VA AYKPN+AFFEAFGAEG+ ALK+V+ A+P IPVLLDAKRGDI TTAAAYA AAF++L AH+ITL YMG D++ PF++ P +G FVLCKTSN S+N+ QTL+V + G + L+E+VA C+ WN ++NVGLVVGATD ALRR RA P LWILAP G+GAQGG+L+EA +A L G+G+L+P+SRGIS+A DP A A + RD IN R A+ L QREF + +LS VLKF DF TLKSGR SPYFFNAGLF G AL +LG+FYAQAI +EFDV+FGPAYKGI L AAVA A+ + +++ F+YNRKE KDHGEGG+LVG D+ KRVL++DDVITAGTAI EA+D+L A ++GV I+LDRQE D + SA+ +VEE+FG+PVVS+ + +L Y+ + ++ A+A L +++YRA+YGV Sbjct: 3 FFASLRQRVHAIDSLLCIGLDPHVVELPEPT--AAAAEAFCLRLIEATHHVAAAYKPNSAFFEAFGAEGITALKKVVKAIPAGIPVLLDAKRGDISTTAAAYAVAAFEQLEAHSITLAPYMGQDSIDPFIRGKPERGCFVLCKTSNPSANDFQTLSVATGQGESRLLYEQVALKCQEWNSEDNVGLVVGATDVEALRRVRAVTPNLWILAP-GIGAQGGNLEEAVTAGLSADGLGMLIPISRGISKATDPKAAAESFRDAINAVRVAKVANASAVQS------------LGSTQREFTKFALSIGVLKFGDF----------TLKSGRKSPYFFNAGLFRTGRALGQLGKFYAQAIRESG--IEFDVLFGPAYKGITLSAAVAIAYAELYDVDIPFAYNRKEAKDHGEGGVLVGADMTNKRVLIIDDVITAGTAIAEAMDILKHTNAVVSGVCISLDRQEKVSVTD---TRSAIDRVEESFGIPVVSITNLDNLVAYLETVDASSDANASYLPVIKSYRAEYGV 496
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Match: A0A662WGG3_9STRA (OMPdecase domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGG3_9STRA) HSP 1 Score: 512 bits (1318), Expect = 2.570e-168 Identity = 302/545 (55.41%), Postives = 371/545 (68.07%), Query Frame = 1 Query: 169 TKRMATFASQPGHGFFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAFCLRIIEATSSVALAYKPNAAFFEAFGAEGVAALKEVIAAVPQDIPVLLDAKRGDIGTTAAAYASAAFDELGAHAITLNAYMGSDTVTPFLKD-PAKGVFVLCKTSNQSSNELQTLAVGSSGSGKALFEEVASLCESWNGDNNVGLVVGATDASALRRARAAAPGLWILAPAGVGAQGGDLDEACSAALDDRGMGLLVPVSRGISRADDPAAEAATLRDRINGARARCKDRAAXXXXXXXXXXXFSSAVLLPYQREFIELSLSQKVLKFADFSGEGEGEPYFTLKSGRHSPYFFNAGLFSKGSALAKLGRFYAQAI----VNHRPLL-----EFDVVFGPAYKGIPLGAAVAYTLADRHGLEVGFSYNRKEPKDHGEGGLLVGEDLQGKRVLVVDDVITAGTAIREAIDMLTEEGATLAGVVIALDRQEVTGAEDALASSSAVQQVEEAFGVPVVSVVGMSHLTEYMASQGDAAGASAQALEAMRAYRAKYG 1773 T+ T + FF + R VDSLL VGLDPH +EL E + A A+AFCLR+IE T VA AYKPN+AFFEAFGAEG+ AL VI AVP IPVLLDAKRGDI TTAAAYA +AF++L AHAITL YMG D++ PF++ P +G FVLCKTSN S+N+ QTL+VGS +ALFEEVA+ CE WN ++NVGLVVGATD ALRR RA P LWILAP G+GAQGG+L+EA +A L G+GLLVPVSRGIS+A +P A +LRD IN R + K AA + +V + EFI+ +LS VLKF DF TLKSGR SPYFFNAGLF G AL +LG+FYAQAI H L EFDV+FGPAYKGI L AAVA A+ + +++ F+YNRKE KDHGEGG+LVG D+ K+VL++DDVITAGTAIREA +L + GA ++GV I+LDRQE ED + SA+ QV+E+FG+PVVS+ + L ++ S A A+A L +RAYRA +G Sbjct: 7 TRAKPTARTSKMTSFFGALRARVAAVDSLLCVGLDPHVAELPEAS--AAAAQAFCLRLIEQTQHVAAAYKPNSAFFEAFGAEGITALHTVIKAVPAGIPVLLDAKRGDISTTAAAYAVSAFEKLEAHAITLAPYMGQDSIDPFVRGHPERGCFVLCKTSNPSANDFQTLSVGS----RALFEEVAAKCEQWNSEDNVGLVVGATDVEALRRVRAVTPKLWILAP-GIGAQGGNLEEAVTAGLSSDGLGLLVPVSRGISKASNPKEAAESLRDAINAVR-KTKVAAA------------AVSVSSSRESEFIKFALSFGVLKFGDF----------TLKSGRKSPYFFNAGLFRTGRALGQLGKFYAQAIHVRSARHEAALWANGVEFDVLFGPAYKGITLAAAVAIAYAELYDVDLPFAYNRKEAKDHGEGGVLVGADMTNKKVLIIDDVITAGTAIREAFGILEKTGAHVSGVCISLDRQEKVSVED---TRSAIDQVKESFGIPVVSIAALDDLVGFLESVDPATDANAAFLPVIRAYRADFG 518
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Match: A0A0P1ACV2_PLAHL (Orotidine 5-phosphate decarboxylase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACV2_PLAHL) HSP 1 Score: 503 bits (1294), Expect = 4.730e-167 Identity = 289/523 (55.26%), Postives = 365/523 (69.79%), Query Frame = 1 Query: 211 FFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAFCLRIIEATSSVALAYKPNAAFFEAFGAEGVAALKEVIAAVPQDIPVLLDAKRGDIGTTAAAYASAAFDELGAHAITLNAYMGSDTVTPFLKD-PAKGVFVLCKTSNQSSNELQTLAVGSSGSGKALFEEVASLCESWNGDNNVGLVVGATDASALRRARAAAPGLWILAPAGVGAQGGDLDEACSAALDDRGMGLLVPVSRGISRADDPAAEAATLRDRINGARARCKDRAAXXXXXXXXXXXFSSAVLLPYQREFIELSLSQKVLKFADFSGEGEGEPYFTLKSGRHSPYFFNAGLFSKGSALAKLGRFYAQAIVNHRPLLEFDVVFGPAYKGIPLGAAVAYTLADRHGLEVGFSYNRKEPKDHGEGGLLVGEDLQGKRVLVVDDVITAGTAIREAIDMLTEEGATLAGVVIALDRQEVTGAEDALASSSAVQQVEEAFGVPVVSVVGMSHLTEYMASQGDAAGASAQALEAMRAYRAKYGV 1776 FF + R VDSL+ VGLDPH +EL E A A+AFCL +IE T VA A+KPN+AFFEAFGAEG+ AL+ +I A+P IPV+LDAKRGDI TTAAAYA +AFD+L AHAITL YMG D++ PF++ P +G FVLCKTSN S+N+ QTL+VGS +ALFEEVA+ CE WN ++NVGLVVGATD ALRR R +P LWILAP G+GAQGG+L+EA A L G GLLVPVSRGIS+A++P A +LRD IN R + K A S+++ EFI+L+LS VLKF DF TLKSGR SPYFFNAGLF G AL +LGRFYA+AI H ++FDV+FGPAYKGI L +AVA D +G+++ F+YNRKE KDHGEGG+LVG D+ GK+VL++DDVITAGTAIREA +L + A ++GV I+LDRQE +ED + SA+ + E+F +PVV++ + L EY+ A+ +A L +R+YRA+YGV Sbjct: 4 FFRLLRERVALVDSLVCVGLDPHIAELNEAT--AAAAQAFCLNLIEQTQHVAAAFKPNSAFFEAFGAEGITALQAIIKAIPDGIPVILDAKRGDISTTAAAYAVSAFDKLEAHAITLAPYMGVDSIDPFVRGHPDRGCFVLCKTSNPSANDFQTLSVGS----RALFEEVAAKCEQWNSEDNVGLVVGATDVEALRRVRMISPNLWILAP-GIGAQGGNLEEAVMAGLSADGFGLLVPVSRGISKAENPKEAAESLRDAINVVR-KTKLSAVTTKGN-------STSI------EFIKLALSFGVLKFGDF----------TLKSGRQSPYFFNAGLFRTGRALGQLGRFYAEAI--HNSGVKFDVLFGPAYKGITLASAVAIAFGDMYGVDIPFAYNRKEAKDHGEGGVLVGADMTGKKVLIIDDVITAGTAIREAFTILKKTNAHVSGVCISLDRQEKVSSED---TRSAIDHIRESFDIPVVTIATLDSLVEYLEKLDVASDTNASYLSIIRSYRAQYGV 490
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Match: G4ZV79_PHYSP (OMPdecase domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZV79_PHYSP) HSP 1 Score: 500 bits (1287), Expect = 3.640e-166 Identity = 301/524 (57.44%), Postives = 357/524 (68.13%), Query Frame = 1 Query: 205 HGFFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAFCLRIIEATSSVALAYKPNAAFFEAFGAEGVAALKEVIAAVPQDIPVLLDAKRGDIGTTAAAYASAAFDELGAHAITLNAYMGSDTVTPFLKDPAKGVFVLCKTSNQSSNELQTLAVGSSGSGKALFEEVASLCESWNGDNNVGLVVGATDASALRRARAAAPGLWILAPAGVGAQGGDLDEACSAALDDRGMGLLVPVSRGISRADDPAAEAATLRDRINGARARCKDRAAXXXXXXXXXXXFSSAVLLPYQREFIELSLSQKVLKFADFSGEGEGEPYFTLKSGRHSPYFFNAGLFSKGSALAKLGRFYAQAIVNHRPLLEFDVVFGPAYKGIPLGAAVAYTLADRHGLEVGFSYNRKEPKDHGEGGLLVGEDLQGKRVLVVDDVITAGTAIREAIDMLTEEGATLAGVVIALDRQEVTGAEDALASSSAVQQVEEAFGVPVVSVVGMSHLTEYMASQGDAAGASAQALEAMRAYRAKYGV 1776 + FF + R +VDSLL VGLDPH +EL E A A+AFCLR+IE T VA YKPN+AFFEAFGAEGV AL VI A+PQ IPVLLDAKRGDI TTAAAYA +AFD L AHAITL YMG+D++ PF TSN S+++ QTL GSSG +ALFEEVA CE WN ++NVGLVVGATD ALRR RA P LWILAP G+GAQGG+L+EA SA L GMGLLVPVSRGIS+A +P A LRD IN R + K AA SSA EFI+ +LS VLKF DF TLKSGR SPYFFNAGLF G AL +LG+FYAQAI H +EFDV+FGPAYKGI L AAVA AD +G+++ F+YNRKE KDHGEGG+LVG D+ GK+VL++DDVITAGTAIREA +L + A ++GV I+LDRQE ED + SA+ QV E FG+PVVS+ + +L Y+ + A+ A+A L +RAYRA YGV Sbjct: 3 NSFFASVRARVAQVDSLLCVGLDPHVAELPEPT--AAAAQAFCLRLIEQTQHVAAMYKPNSAFFEAFGAEGVMALHAVIQAIPQGIPVLLDAKRGDISTTAAAYAVSAFDVLQAHAITLAPYMGADSIDPF-------------TSNPSADDFQTLPAGSSG--RALFEEVALKCEQWNAEDNVGLVVGATDVDALRRVRAVTPNLWILAP-GIGAQGGNLEEAVSAGLSADGMGLLVPVSRGISKAAEPKQAAEELRDAINAVR-KSKVGAAVVAK--------SSA------NEFIKFALSFGVLKFGDF----------TLKSGRKSPYFFNAGLFRTGRALGQLGKFYAQAI--HDSGVEFDVLFGPAYKGITLAAAVAIAYADMYGVDIPFAYNRKEAKDHGEGGVLVGADMTGKKVLIIDDVITAGTAIREAFAILEKTNAHVSGVCISLDRQEKVSIED---TRSAIDQVRETFGIPVVSIATLDNLVGYLETVDVASDANASYLPVIRAYRADYGV 478
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Match: M4BYA3_HYAAE (OMPdecase domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYA3_HYAAE) HSP 1 Score: 497 bits (1279), Expect = 1.310e-164 Identity = 294/529 (55.58%), Postives = 356/529 (67.30%), Query Frame = 1 Query: 211 FFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAFCLRIIEATSSVALAYKPNAAFFEAFGAEGVAALKEVIAAVPQDIPVLLDAKRGDIGTTAAAYASAAFDELGAHAITLNAYMGSDTVTPFLKD-PAKGVFVLCKTSNQSSNELQTLAVGSSGSGKALFEEVASLCESWNGDNNVGLVVGATDASALRRARAAAPGLWILAPAGVGAQGGDLDEACSAALDDRGMGLLVPVSRGISRADDPAAEAATLRDRINGARARCKDRAAXXXXXXXXXXXFSSAVLLPYQREFIELSLSQKVLKFADFSGEGEGEPYFTLKSGRHSPYFFNAGLFSKGSALAKLGRFYAQAIVNHRPLLEFDVVFGPAYKGIPLGAAVAYTLADRHGLEVGFSYNRKEPKDHGEGGLLVGEDLQGKRVLV------VDDVITAGTAIREAIDMLTEEGATLAGVVIALDRQEVTGAEDALASSSAVQQVEEAFGVPVVSVVGMSHLTEYMASQGDAAGASAQALEAMRAYRAKYGV 1776 FFD + R VDSLL VGLDPH EL E +A A AFCLR+IE T VA A+KPN+AFFEAFGAEG+ AL VI ++P IPV+LDAKRGDI TTAAAYA +AFD+L AHAITL YMG D++ PF+K P G FVLCKTSN S+N+ QTL+VGS +ALFEEVA+ CE WN ++NVGLVVGATD ALRR R P LWIL P G+GAQGG+L E A L G+GLLVPVSRGIS + DP A +LRD IN R + K AA S+ V+ EFI+ +LS VLKF DF TLKSGR SPYFFNAGLF G AL KLG+FYAQAI H +EFDV+FGPAYKGI L AAVA AD +G+++ F+YNRKE KDHGEGG+LVG D+ GKR + DDVITAGTAIREA +L++ A +AGV I+LDRQE ED + SA+ V+ +F +PV+S+ + +L ++ + ++A L +RAYRA YGV Sbjct: 5 FFDSVRARVAAVDSLLCVGLDPHIGELPEPTASA--ALAFCLRLIEETQHVAAAFKPNSAFFEAFGAEGITALHTVIKSIPDGIPVILDAKRGDISTTAAAYAVSAFDKLEAHAITLAPYMGQDSIDPFVKGRPDHGCFVLCKTSNASANDFQTLSVGS----RALFEEVAAKCEQWNVEDNVGLVVGATDVDALRRVRFVTPDLWILTP-GIGAQGGNLKEVVMAGLSASGLGLLVPVSRGISNSADPKQAAESLRDAINAVR-KMKVAAAPG----------SAIVVNSSANEFIKFALSFGVLKFGDF----------TLKSGRQSPYFFNAGLFRTGRALGKLGKFYAQAI--HDSSVEFDVLFGPAYKGITLAAAVAIAYADMYGVDIPFAYNRKEAKDHGEGGVLVGADMTGKRYVTNKLTQPFDDVITAGTAIREAFAILSKTNAQVAGVCISLDRQEKVSVED---TRSAIDHVKASFSIPVMSIATLDNLVAFLENADPTTDSNASYLPVIRAYRADYGV 500 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig98.17129.1 >prot_C-linearis_contig98.17129.1 ID=prot_C-linearis_contig98.17129.1|Name=mRNA_C-linearis_contig98.17129.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=535bp MATFASQPGHGFFDKIARRAEKVDSLLMVGLDPHSSELGEGNINAGGAKAback to top mRNA from alignment at C-linearis_contig98:430418..439739- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig98.17129.1 ID=mRNA_C-linearis_contig98.17129.1|Name=mRNA_C-linearis_contig98.17129.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9322bp|location=Sequence derived from alignment at C-linearis_contig98:430418..439739- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig98:430418..439739- >mRNA_C-linearis_contig98.17129.1 ID=mRNA_C-linearis_contig98.17129.1|Name=mRNA_C-linearis_contig98.17129.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3210bp|location=Sequence derived from alignment at C-linearis_contig98:430418..439739- (Chordaria linearis ClinC8C monoicous)back to top |