mRNA_C-linearis_contig98.17116.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Match: A0A6H5K1I8_9PHAE (GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I8_9PHAE) HSP 1 Score: 677 bits (1748), Expect = 7.960e-234 Identity = 357/497 (71.83%), Postives = 395/497 (79.48%), Query Frame = 2 Query: 203 MASLLQELTKQGHEILLFTLEKSPQLEAAGSPSAAPACSSTPGIPIRYITLDSTFIKVYPSKRLAKPTLSNVMLIADTLRREKPDVLHATVDCISAFFILAAKFLRVPVVGSVHTDVQELLAEMHVAPLMGALVSFKEGVESRLLDTCATTSPSFKEKLAGRGVLCDHILKTGVKVAQFTPTARNAEVRNRLTFGNPEGLLVVYVGRFGPEKRLDKLIRMCGSVDGVYLALIGDGALGHTLSQRHGSWSNRSNGSNGSIETRRTQGGVYCRAGFLGHEDLAPVYASADVHVSCSQFETLGNTVLEAHACGTTVVVPRAQGFVDTVHHGEDGFLFDGTRLAEGAELLACLRDDRVLCDKMGERGRIKVQMQSPEMVSRDVLAWYRRGRA--RAQAIKKSPATSNRTRTWAAAAAAWVRDVRDTLRSLGSVVMGIGICLFILAVVASWFAVEAVQGFAGSFARHCHNARNVLGNSSFFNKISNSYKALTNIPVEREAAR 1687 MASLLQ+L KQGHE+L+FTLEK PQLE A P++ P IR++TLDS+F+ VYP+KRLA PTL+N+ LI +T+R E PDVLH T+DCISAFFILAAKF VPVVGSVHTDVQELLAE++VAP+ G+L++FKEGVESRLLD+CATTSPSFK KLAGRGV+CDHI+KTGV V QF P NAEVRNRLTFGNPEGLLVVYVGRFGPEKRLDKL++MCGSVDGVYLALIGDGA+G LS+RHG WSN RRT+GGVYCR GFLGHEDLAPVYASADVHVSCS FETLGNTVLEAHA GT VVVPRAQGF+DTV+H EDGFLFDG RLAEGA LA LRDDR LC MGERGR KVQMQSPEMVS+ VL WYRR RA + Q I S AT + L SL V+MG+GICL IL VVA WFAVEAVQ GS R+CHNARNVLGNSSFFNK+SNSYKALTNI VEREA R Sbjct: 1 MASLLQQLVKQGHEMLVFTLEKHPQLEPAADPASKP---------IRFVTLDSSFLAVYPTKRLAMPTLTNMNLICNTIRLEGPDVLHCTLDCISAFFILAAKFYHVPVVGSVHTDVQELLAELNVAPIAGSLITFKEGVESRLLDSCATTSPSFKSKLAGRGVVCDHIIKTGVTVGQFRPGVSNAEVRNRLTFGNPEGLLVVYVGRFGPEKRLDKLVQMCGSVDGVYLALIGDGAMGPALSERHGCWSNSGK--------RRTKGGVYCRIGFLGHEDLAPVYASADVHVSCSHFETLGNTVLEAHASGTAVVVPRAQGFIDTVNHEEDGFLFDGHRLAEGAAFLARLRDDRDLCASMGERGRQKVQMQSPEMVSKHVLEWYRRARASTKGQKITTSLATV----------------AAEQLSSLVKVLMGVGICLLILLVVALWFAVEAVQVLGGSVVRYCHNARNVLGNSSFFNKVSNSYKALTNITVEREATR 464
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Match: A0A835YPI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPI7_9STRA) HSP 1 Score: 394 bits (1012), Expect = 2.190e-123 Identity = 220/426 (51.64%), Postives = 275/426 (64.55%), Query Frame = 2 Query: 143 MKIALYSHSIPPAVDGVSRRMASLLQELTKQGHEILLFTLEKSPQLEAAGSPSAAPACSSTPGIPIRYITLDSTFIKVYPSKRLAKPTLSNVMLIADTLRREKPDVLHATVDCISAFFILAAKFLRVPVVGSVHTDVQELLAEMHVAPLMGALVSFKEGVESRLLDTCATTSPSFKEKLAGRGVLCDHILKTGVKVAQFTPTARNAEVRNRLTFGNPEGLLVVYVGRFGPEKRLDKLIRMCGSVDGVYLALIGDGALGHTLSQRHGSWSNRSNGSNGSIETRRTQGGVYCRAGFLGHEDLAPVYASADVHVSCSQFETLGNTVLEAHACGTTVVVPRAQGFVDTVHHGEDGFLFDGTRL------AEGAELLACLRDDRVLCDKMGERGRIKVQMQSPEMVSRDVLAWYRRGRARAQAIKKSPATS 1402 M++A+YSHSIPPAVDGVSRR S++ EL K GHE+L+FTLEK PQLEA + P P +Y+ L+STF +YPSKR+A PTL N+ I L + +PDV+H T D I+ F LA K L +PVV S+HTDVQ LA + L L + KE +ES LLD+CATTS SFK KL +GV CD+++KT V+V +F P R A+ R +LTF +P+ L+VYVGR PEK LD L+ M SVD YLA+IGDG LG L+ +HG+ +NR +YCR GFL H+ L VYASAD H + S FETLGNTVLEAHACG VV PRAQGFVDTV HG DG LFD L A GA LA LRDD L ++G GR KV + +P+ V+RD++ WY G A A+ + P T+ Sbjct: 1 MRVAIYSHSIPPAVDGVSRRFTSIISELHKAGHEVLVFTLEKEPQLEA----TLFPGSKRRPMF--KYVHLESTFHDLYPSKRIAAPTLGNLWHIGHALAQVRPDVIHCTADAITLQFGLAGKALGIPVVTSIHTDVQLGLAAVGAPSLALYLTNLKERMESCLLDSCATTSESFKTKLLKQGVACDYVVKTAVQVDKFNPGRRCAKTRAQLTFNDPDAFLIVYVGRLAPEKGLDTLVTMARSVDRCYLAVIGDGPLGPHLAAQHGA-ANR----------------LYCRPGFLDHDALPAVYASADAHATASVFETLGNTVLEAHACGVPVVAPRAQGFVDTVSHGVDGLLFDAAGLGAVGAAASGARALAALRDDPALRARLGAAGRAKVLLHAPDQVARDIVQWY--GAAAARGARAGPLTA 401
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Match: D7G4E3_ECTSI (Glycosyltransferase, family GT4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E3_ECTSI) HSP 1 Score: 375 bits (964), Expect = 1.730e-119 Identity = 202/289 (69.90%), Postives = 223/289 (77.16%), Query Frame = 2 Query: 821 RFGPEKRLDKLIRMCGSVDGVYLALIGDGALGHTLSQRHGSWSNRSNGSNGSIETRRTQGGVYCRAGFLGHEDLAPVYASADVHVSCSQFETLGNTVLEAHACGTTVVVPRAQGFVDTVHHGEDGFLFDGTRLAEGAELLACLRDDRVLCDKMGERGRIKVQMQSPEMVSRDVLAWYRRGRARAQAIKKSPATSNRTRTWAAAAAAWVRDVRDTLRSLGSVVMGIGICLFILAVVASWFAVEAVQGFAGSFARHCHNARNVLGNSSFFNKISNSYKALTNIPVEREAAR 1687 ++ +RLDKL++MCGSVDGVYLALIGDGA+G LS+RHG WSN RRT+GGVYCR GFLGHEDLAPVYASADVHVSCS FETLGNTVLEAHA GTTVVVPRAQGF+DTV+H EDGFLFDG RLAEGA LA LRDDR LC MGERGR KVQ+QSPEMVS+ VL WYRR A +T +T T + V + L SL +V+MG+GICLFIL VVA WFAVEAVQ F GS R+CHNARNVLGNSSFFNK+SNSYKALTNIPVEREA R Sbjct: 8 KYYTRERLDKLVQMCGSVDGVYLALIGDGAMGPVLSERHGCWSNSGK--------RRTKGGVYCRIGFLGHEDLAPVYASADVHVSCSHFETLGNTVLEAHASGTTVVVPRAQGFIDTVNHEEDGFLFDGHRLAEGAAFLARLRDDRDLCASMGERGRQKVQIQSPEMVSKHVLEWYRRTCA---------STKGQTVT-----TSLVTVAAERLSSLVAVLMGVGICLFILLVVALWFAVEAVQVFGGSVVRYCHNARNVLGNSSFFNKVSNSYKALTNIPVEREATR 274
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Match: D7G4E4_ECTSI (SqdX n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E4_ECTSI) HSP 1 Score: 297 bits (760), Expect = 1.180e-90 Identity = 149/204 (73.04%), Postives = 173/204 (84.80%), Query Frame = 2 Query: 143 MKIALYSHSIPPAVDGVSRRMASLLQELTKQGHEILLFTLEKSPQLEAAGSPSAAPACSSTPGIPIRYITLDSTFIKVYPSKRLAKPTLSNVMLIADTLRREKPDVLHATVDCISAFFILAAKFLRVPVVGSVHTDVQELLAEMHVAPLMGALVSFKEGVESRLLDTCATTSPSFKEKLAGRGVLCDHILKTGVKVAQFTPTAR 754 MKIALYSHSIPPAVDGVSRRM+SLLQ+L KQGHEIL+FTLEK PQLE A ++ P IR+ TLDS+F+ VYP+KRLA PTL+N+ LI +T+R E+PDVLH T+DCISAFFILAAKF VPVVGSVHTDVQELLAE++VAP+ G+L++FKEGVESRLLD+CATTSPSFK KLAGRGV+CDHI+KTGVKV QF P R Sbjct: 1 MKIALYSHSIPPAVDGVSRRMSSLLQQLVKQGHEILVFTLEKHPQLEPAADAASKP---------IRFFTLDSSFLAVYPTKRLAMPTLTNMNLICNTIRLERPDVLHCTLDCISAFFILAAKFYHVPVVGSVHTDVQELLAELNVAPIAGSLITFKEGVESRLLDSCATTSPSFKAKLAGRGVVCDHIIKTGVKVGQFRPDVR 195
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Match: A0A7S4FQE8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FQE8_9EUGL) HSP 1 Score: 302 bits (774), Expect = 4.900e-90 Identity = 186/413 (45.04%), Postives = 240/413 (58.11%), Query Frame = 2 Query: 143 MKIALYSHSIPPAVDGVSRRMASLLQELTKQGHEILLFTLEKSPQLEAAGSPSAAPACSSTPGIPI-RYITLDSTFIKVYPSKRLAKPTLSNVMLIADTLRREKPDVLHATVDCISAFFILAAKFLRVPVVGSVHTDVQELLAEMHVAPLMGALVSFKEGVESRLLDTCATTSPSFKEKLAGRGVLCDHILKTGVKVAQFTPTARNA----EVRNRLTFGNPEGLLVVYVGRFGPEKRLDKLIRMCGS--VDGVYLALIGDGALGHTLSQRHGSWSNRSNGSNGSIETRRTQGGVYCRAGFLGHEDLAPVYASADVHVSCSQFETLGNTVLEAHACGTTVVVPRAQGFVDTVHHGEDGFLFDGTRLAEGAELLACLRDDRVLCDKMGERGRIKVQMQ-SPEMVSRDVLAWYRR 1357 MK+A+YSHS PP VDG++ RM+SL++EL + GHE+LLFTLE+ L A G P+ +P+ RY+TL+S F +YP KR+A P++ N I LR +PDVLH T D ++ F L VPV S+HTD+ ++L +H A + E SRL+D+CATTS SFKE+L R DH+++TGV A F P A +R RLTF +P+ LV+YVGR PEK +D L+ ++ VYLAL+GDG L ++ HG+ TR VYC FL H LA +YA+ D HVS S FET GNTVLEA A GT VVVP AQGF DTV HG DGFLF+ +A LR D L D+MG GR K +P V+RD + WY R Sbjct: 1 MKVAIYSHSFPPTVDGIAFRMSSLVRELLRTGHEVLLFTLEQC--LPAFGPPA----------LPMPRYVTLESIFPALYPEKRVAFPSMKNAFRIWGALRAFQPDVLHCTSDSLALTFCAIGAALGVPVGASMHTDLDKVLRSVHAALPALVICWGIEAAISRLVDSCATTSVSFKEELLQRWCRIDHVVRTGVDTAVFDPRCLGAADRDRLRCRLTFDHPDAFLVLYVGRLSPEKSIDVLVDALSQAGMEAVYLALVGDGPLAGRMAALHGA------------HTR-----VYCVPEFLPHSKLAALYAACDAHVSASVFETFGNTVLEAQASGTPVVVPDAQGFRDTVRHGADGFLFEPGSARSLGLRVAKLRADPRLRDEMGRAGRGKALAGLTPAAVARDYVDWYGR 384
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Match: A0A7S4G4M1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G4M1_9EUGL) HSP 1 Score: 305 bits (780), Expect = 6.700e-90 Identity = 181/413 (43.83%), Postives = 244/413 (59.08%), Query Frame = 2 Query: 143 MKIALYSHSIPPAVDGVSRRMASLLQELTKQGHEILLFTLEKSPQLEAAGSPSAAPACSSTPGIPI-RYITLDSTFIKVYPSKRLAKPTLSNVMLIADTLRREKPDVLHATVDCISAFFILAAKFLRVPVVGSVHTDVQELLAEMHVAPLMGALVSFKEGVESRLLDTCATTSPSFKEKLAGRGVLCDHILKTGVKVAQFTPTARNAE----VRNRLTFGNPEGLLVVYVGRFGPEKRLDKLIRMC--GSVDGVYLALIGDGALGHTLSQRHGSWSNRSNGSNGSIETRRTQGGVYCRAGFLGHEDLAPVYASADVHVSCSQFETLGNTVLEAHACGTTVVVPRAQGFVDTVHHGEDGFLFDGTRLAEGAELLACLRDDRVLCDKMGERGRIKVQMQ-SPEMVSRDVLAWYRR 1357 M++A+YSHS PP++DGV RRM+SL+ EL GHE+L+ TLE E +G G+P+ +Y+TL+S F YP KR+A P+++N IA LR P+VLH TVD ++ F L +PV GS+HTDV ++L + A + E +SRLLD CATTS S+KE+L R DH++ T V F P +AE +R+RLTFG+P+ LV+YVGR EK ++ L M ++ VYLA+ GDG + L+ H S +NR VYCR GFL H DLA +YA++D HVS S FETLGNTVLEA A G V+VP AQGF DTV H DGFLF+ ++ +A L+ + L ++MGE GR KVQ + + E V+ D + WY R Sbjct: 12 MRVAVYSHSFPPSIDGVCRRMSSLVYELLVGGHEVLILTLES----ELSGL--------DLHGLPMPKYVTLESGFPASYPMKRIANPSITNSYRIASALREFNPEVLHCTVDALTLLFAAIGLALGIPVAGSIHTDVDKILRSLRAAEWAIKVGWALEAADSRLLDACATTSNSYKEELEHRWCKIDHVVLTAVNTDVFNPNCVDAEERRAIRSRLTFGHPDAFLVLYVGRLSLEKSIEVLFDMLLVPGMENVYLAIAGDGPIAKDLAAMH-SEANR----------------VYCRPGFLSHADLAKLYAASDAHVSASVFETLGNTVLEAQAAGAPVIVPYAQGFKDTVKHESDGFLFEAGSPHSLSQYVAKLQANPTLHNEMGEAGRQKVQGERTAEAVACDYVQWYDR 395
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Match: A0A7S2RLM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLM0_9STRA) HSP 1 Score: 209 bits (532), Expect = 5.700e-55 Identity = 141/386 (36.53%), Postives = 192/386 (49.74%), Query Frame = 2 Query: 116 CAQGGRGETMKIALYSHSIPPAVDGVSRRMASLLQELTKQGHEILLFTLEKSPQLEAAGSPSAAPACSSTPGIPIRYITLDSTFIKVYPSKRLAKPTLSNVMLIADTLRREKPDVLHATVDCISAFFILAAKFLRVPVVGSVHTDVQELLAEMHVAPLMGALVSFKEGVESRLLDTCATTSPSFKEKLAGRGVLCDHILKTGVKVAQ-FTPTAR-NAEVRNRLTFGNPEGLLVVYVGRFGPEKRLDKLIRMCGSVD--GVYLALIGDGALGHTLSQRHGSWSNRSNGSNGSIETRRTQGGVYCRAGFLGHEDLAPVYASADVHVSCSQFETLGNTVLEAHACGTTVVVPRAQGFVDTVHHGEDGFLFDGTRLAEGAELLACLRDDR 1261 C + G G+ M + LYSHS+PP VDGVS R + ++ L ++GH++ L T+E P+LE PS ST L S + YP+KR T++N+ + R+ + DV+H T+ F + L +P++ S+HTD LL + + +V E + S + D T SPS+ L RG+ C + G F P R R RLTFG+PEG ++ Y GR PEK +D L+ + GV+LALIGDG HG + VY FLG +LA VYAS DV S S FET G T LEA CGT + PRAQGF D V HG+ G+LFD L+ A L L ++R Sbjct: 19 CDRTGDGQGMNVLLYSHSLPPWVDGVSTRFRAHIKMLEERGHQVDLLTIE--PELE----PSVRKCAHSTE-------VLTSRCLYWYPAKRFPDLTVANLAKVWRACRQSQADVMHVTMCPAMPLFYICTAILDIPLMVSIHTDSVTLLNKCKQPWWVVQIVKALEPLGSWVCDAAYTVSPSYSAILLQRGIKCMDVTWGGYANPDVFRPERRFEGHWRERLTFGHPEGFIICYAGRISPEKDIDFLVELTRQFKDRGVWLALIGDGPAAEDFVHLHGE-----------------EHQVYFVPKFLGQNELAQVYASVDVVTSASTFETFGYTALEAMQCGTPFLGPRAQGFRDVVSHGKGGYLFDARDLSSAAHYLELLLNER 374
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Match: A0A482RVI5_9ARCH (Glycosyltransferase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVI5_9ARCH) HSP 1 Score: 181 bits (460), Expect = 2.790e-48 Identity = 110/249 (44.18%), Postives = 142/249 (57.03%), Query Frame = 2 Query: 458 VLHATVDCISAFFILAAKFLRVPVVGSVHTDVQELLAEMHVAPLMGALVSFKEGVESRLLDTCATTSPSFKEKLAGRGVLCDHILKTGVKVAQFTPTARNAEVRNRLTFGNPEG-LLVVYVGRFGPEKRLD------KLIRMCGSVDGVYLALIGDGALGHTLSQRHGSWSNRSNGSNGSIETRRTQGGVYCRAGFLGHEDLAPVYASADVHVSCSQFETLGNTVLEAHACGTTVVVPRAQGFVDTVHH 1183 ++H D S F+L L +PVVGS HTD+ +LL H V KE +S +LD ATTS SF+ KL V CDH+L T V F P+ +A+VR+ LTF + + L VYVGR EKR+D +L+R G+ YLA+IGDG + H S E+R +YCR FL H++LA +YAS+DVHV+ S+FETLGNTVLEA+AC VV PR QGFV+TV H Sbjct: 1 MVHVVADAYSQSFVLVGLLLGIPVVGSFHTDIIDLLRTHHAFFFQEWFVLAKEMTDSFVLDAAATTSQSFQHKLRTHQVHCDHVLITAVDSGVFAPSRCSAQVRSELTFNDADNAFLCVYVGRISEEKRIDVLIEALRLLRSGGTR--AYLAIIGDGPQAAKYAALH------------SKESR-----IYCRPRFLSHDELAGLYASSDVHVTASEFETLGNTVLEANACALPVVTPRTQGFVNTVQH 230
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Match: A0A7S2H0N2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0N2_9STRA) HSP 1 Score: 181 bits (460), Expect = 3.050e-45 Identity = 134/380 (35.26%), Postives = 179/380 (47.11%), Query Frame = 2 Query: 149 IALYSHSIPPAVDGVSRRMASLLQELTKQGHEILLFTLEKS--PQLEAAGSPSAAPACSSTPGIPIRYITLDSTFIKVYPSKRLAKPTLSNVMLIADTLR-REKPDVLHATVDCISAFFILAAKFLRVPVVGSVHTDVQELLAEMHVAPLMGALVSFKEGVESRLLDTCATTSPSFKEKLAGRGVLCDHILKTGVK-VAQFTPT------ARNAEVRNRLTFGNPEGLLVV-YVGRFGPEKRLDKLIRMCGSVD--GVYLALIGDGALGHTLSQRHGSWSNRSNGSNGSIETRRTQGGVYCRAGFLGHEDLAPVYASADVHVSCSQFETLGNTVLEAHACGTTVVVPRAQGFVDTVHHGEDGFLFDGTRLAEGAELLACL 1249 I +YSHS+PP VDGV+ R + + L K+G+ + L T+E++ P L S LD+ + YP+KR TL N+ + + +P ++HAT+ F L A F VP+V SVHTD LL + + LV E + L D T SPS+ + L RGV C + G A+F P A+ A R +LTFG P+G ++ Y GR PEK LD L+ + GV++AL+GDG HG + VY GFL H+DLA V+AS D S S FET G + LEA GT V+ PRAQG D V H G+LFD L A L L Sbjct: 56 IIIYSHSLPPWVDGVATRFTAHTEMLRKEGYRVHLLTMEENLDPALRRMAS---------------SVTLLDAKPLHWYPAKRFPTQTLQNLWRVWNACACTAEPSIIHATLCPSLPLFFLTACFRDVPIVVSVHTDSVTLLDKCGQPRWVVRLVKMLEPLSCWLCDATYTVSPSYAQILKQRGVKCLDVTWGGFSDPAKFHPRRLDDNPAKRAAWREKLTFGAPQGAFIMAYAGRISPEKDLDFLLALQRRFKSRGVWIALLGDGPAADVYQPLHG-----------------PEHQVYFVPGFLNHDDLADVFASVDCMASASTFETFGFSALEALCTGTPVLAPRAQGLRDVVKHNAGGYLFDAKDLDSAAHFLELL 403
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Match: I0HYP0_CALAS (Mannosyltransferase MgtA n=2 Tax=Caldilinea aerophila TaxID=133453 RepID=I0HYP0_CALAS) HSP 1 Score: 155 bits (391), Expect = 3.870e-37 Identity = 127/411 (30.90%), Postives = 192/411 (46.72%), Query Frame = 2 Query: 143 MKIALYSHSIPPAVDGVSRRMASLLQELTKQGHEILLFTLEKSPQLEAAGSPSAAPACSSTPGIPIRYITLDSTFIKVYPSKRLAKPTLSNVMLIADTLRREKPDVLHATVDCISAFFI--LAAKFLRVPVVGSVHTDVQELLAEMHVAPLMGALVSFKEGVESRL-LDTCATTSPSFKEKLAGRGVLCDHILKTGVKVAQFTPTARNAEVRNRLTFGNPEGLLVVYVGRFGPEKRLDKLIRMCGSVDGVYLALIGDGALGHTLSQRHGSWSNRSNGSNGSIETRRTQGGVYCR-----AGFLGHEDLAPVYASADVHVSCSQFETLGNTVLEAHACGTTVVVPRAQGFVDTVHHGEDGFLFDGTRLAEGAELLACLRDDRVLCDKMGERGRIKVQMQSPEMVSRDVLAWY 1351 M+IAL++ + P VDG+ + LL+ L ++GHE +LF AG P R + L +YP +L P + + + LR + D++H V+ +S ++ A+ L++P+V S HTDV A V L LV F + + L+ C +T + +L +G H+ GV +F P R+ E R RLT G + L++YVGR PEKR+D L+ + ++ V LA++GDG L + ++ R G+L DLA YAS+D+ V + ETLGN VLEA A G V+ PR+ G +D+V GE G LF+ A + L + ++GE GR +V QS E V +L Y Sbjct: 1 MRIALFTETFLPKVDGIVNTLCHLLEHLARRGHESILFA--------PAGGPGRFGKT--------RIVGLAGVPFPLYPELKLVPPVYN----VLNELRAFRADLVHV-VNPVSLGYVGLRHARRLKLPLVASYHTDVPGFAARWGVRFLYRPLVRFFRWIHNAADLNLCPSTVT--QRELIAQGYQRVHVWSRGVDSERFHPGRRSQEWRMRLTEGEIDRPLLLYVGRLSPEKRVDWLLPVLDALPHVRLAIVGDGPARPQLER------------------------LFARYRVHFTGYLSGLDLAAAYASSDIFVFPAANETLGNVVLEAMASGLPVLAPRSGGVLDSVVDGETGLLFEPESPASLVAMARTLVHAPDVARRLGEHGRARVLHQSWERVLDGLLEHY 364 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig98.17116.1 >prot_C-linearis_contig98.17116.1 ID=prot_C-linearis_contig98.17116.1|Name=mRNA_C-linearis_contig98.17116.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=516bp MKIALYSHSIPPAVDGVSRRMASLLQELTKQGHEILLFTLEKSPQLEAAGback to top mRNA from alignment at C-linearis_contig98:241939..272092- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig98.17116.1 ID=mRNA_C-linearis_contig98.17116.1|Name=mRNA_C-linearis_contig98.17116.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=30154bp|location=Sequence derived from alignment at C-linearis_contig98:241939..272092- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig98:241939..272092- >mRNA_C-linearis_contig98.17116.1 ID=mRNA_C-linearis_contig98.17116.1|Name=mRNA_C-linearis_contig98.17116.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3096bp|location=Sequence derived from alignment at C-linearis_contig98:241939..272092- (Chordaria linearis ClinC8C monoicous)back to top |