Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 350 |
Cds size | 348 |
Stop | 0 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622930828.6527684-CDS-C-linearis_contig97:606104..606452 | 1622930828.6527684-CDS-C-linearis_contig97:606104..606452 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 606105..606452 + |
1690881270.908952-CDS-C-linearis_contig97:606104..606452 | 1690881270.908952-CDS-C-linearis_contig97:606104..606452 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 606105..606452 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17114.1 >prot_C-linearis_contig97.17114.1 ID=prot_C-linearis_contig97.17114.1|Name=mRNA_C-linearis_contig97.17114.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=116bp
MEGKRKDVSSALGDSEVSERKMDALFNLMKYANKEEILNLVANSGEGGRE AKCLHVLSGSGGASRASSASGQRGYKGKASRYDADLQLAHEIHEQEIENR RREDALQQAESQKVAK back to topmRNA from alignment at C-linearis_contig97:606105..606452+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig97.17114.1 ID=mRNA_C-linearis_contig97.17114.1|Name=mRNA_C-linearis_contig97.17114.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=348bp|location=Sequence derived from alignment at C-linearis_contig97:606105..606452+ (Chordaria linearis ClinC8C monoicous) ATGGAGGGGAAACGGAAGGACGTGTCGTCTGCGTTGGGTGATTCGGAGGT
GAGTGAGCGAAAAATGGATGCTCTATTCAACTTGATGAAATACGCAAACA
AGGAGGAAATCCTGAATCTTGTGGCTAACTCGGGGGAAGGGGGGAGAGAG
GCCAAATGTTTACACGTTCTTTCGGGGTCTGGTGGTGCCTCTCGCGCGTC
TAGTGCGAGCGGTCAAAGGGGGTACAAGGGTAAGGCGAGCAGGTACGACG
CTGACCTTCAACTCGCACACGAAATTCACGAGCAAGAAATCGAGAATCGT
AGGCGGGAAGATGCACTTCAACAAGCAGAGAGCCAGAAGGTAGCTAAA back to topCoding sequence (CDS) from alignment at C-linearis_contig97:606105..606452+ >mRNA_C-linearis_contig97.17114.1 ID=mRNA_C-linearis_contig97.17114.1|Name=mRNA_C-linearis_contig97.17114.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=696bp|location=Sequence derived from alignment at C-linearis_contig97:606105..606452+ (Chordaria linearis ClinC8C monoicous) ATGGAGGGGAAACGGAAGGACGTGTCGTCTGCGTTGGGTGATTCGGAGGT GAGTGAGCGAAAAATGGATGCTCTATTCAACTTGATGAAATACGCAAACA AGGAGGAAATCCTGAATCTTGTGGCTAACTCGGGGGAAGGGGGGAGAGAG GCCAAATGTTTACACGTTCTTTCGGGGTCTGGTGGTGCCTCTCGCGCGTC TAGTGCGAGCGGTCAAAGGGGGTACAAGGGTAAGGCGAGCAGGTACGACG CTGACCTTCAACTCGCACACGAAATTCACGAGCAAGAAATCGAGAATCGT AGGCGGGAAGATGCACTTCAACAAGCAGAGAGCCAGAAGGTAGCTAAAAT GGAGGGGAAACGGAAGGACGTGTCGTCTGCGTTGGGTGATTCGGAGGTGA GTGAGCGAAAAATGGATGCTCTATTCAACTTGATGAAATACGCAAACAAG GAGGAAATCCTGAATCTTGTGGCTAACTCGGGGGAAGGGGGGAGAGAGGC CAAATGTTTACACGTTCTTTCGGGGTCTGGTGGTGCCTCTCGCGCGTCTA GTGCGAGCGGTCAAAGGGGGTACAAGGGTAAGGCGAGCAGGTACGACGCT GACCTTCAACTCGCACACGAAATTCACGAGCAAGAAATCGAGAATCGTAG GCGGGAAGATGCACTTCAACAAGCAGAGAGCCAGAAGGTAGCTAAA back to top
|