mRNA_C-linearis_contig97.17109.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Match: D7G6J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J5_ECTSI) HSP 1 Score: 1489 bits (3856), Expect = 0.000e+0 Identity = 747/780 (95.77%), Postives = 754/780 (96.67%), Query Frame = 2 Query: 239 GTTSFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVIPLWGGVGAGFSSMGDAHNAWCSLEKKSTKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEIA----DHTPGSTPSR*RALALHGGQSSDRTVERQGHRRCSPPR 2566 G FRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNT KANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVIPLWGGVGAGFSSMGDAHNAWCSLEK STKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGL GC+ GGWD LGRTTVIGAQ+RDLGNLGK+HKNHTYNI+RSSA DH P SR RALA++GGQSSDRT+ERQGHRR S R Sbjct: 79 GGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTNKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVIPLWGGVGAGFSSMGDAHNAWCSLEK-STKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLLGCDEAGGWDGLGRTTVIGAQHRDLGNLGKVHKNHTYNIIRSSAGSNGRGNVDHPPSPASSRRRALAVYGGQSSDRTLERQGHRRHSSQR 857
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI) HSP 1 Score: 1375 bits (3559), Expect = 0.000e+0 Identity = 729/956 (76.26%), Postives = 730/956 (76.36%), Query Frame = 2 Query: 239 GTTSFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPLWGGVGAGFSSMGDAHNAWCSLEKKSTKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI 2449 G FRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGP DEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALD+LMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYII LDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLV IPLWGGVGAGFSSMGDAHNAWCSLEK STKRNLWPEICEAESPSKLESLLRGLLSQQ SRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI Sbjct: 79 GGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPCDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDKLMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKKTPGTLKFEPALKNPLCGERRVFEGIEVKLSLDTLPPAMRQIPCPPKPHLQVIPLWGGVGAGFSSMGDAHNAWCSLEK-STKRNLWPEICEAESPSKLESLLRGLLSQQASRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI 1033
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 1112 bits (2877), Expect = 0.000e+0 Identity = 589/959 (61.42%), Postives = 641/959 (66.84%), Query Frame = 2 Query: 239 GTTSFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTK-TFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKA-SEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPLWGGVGAGFSSMGDAHNAWCSLEKKSTKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI 2449 G FRNL+S+LL+RD+G EEFDTW+SG ++PP LTLR L KWLN T+ANVVVWSHRG+G V GP D+KT+LRP LHVGVREGHVYRL L GPWR+RFGS +DV IE+ ++T RRFRRIAE EE+++PD T CG+K TF CVADIVSD++A NQ+E KR K SE TWYAPPGT LDELMLHLHLVGVSC GRL++YSHWDSLSLPAHGITIRTWCSASMGGLDPDE EPDQATRLIELHN LGLKFY GVLDFRVSSQYSQSLLALLEVCWRGPIVGAE+VSG+SYG EDWQCDINGAHTAALM+ME VPVFGH+DEVEE+D H IEDWTLYII LDA +PDVF NADVTPVFGRNYKRYLDL+DTA RHRVTHFVRPSR V CHIP LV IPLW G+G GFSSM H+AW SLE+ + KRNLWPEICEAESPS LESL+R + QQGSR+VCAVTGEHGGAGKSYCA RAA IFKTGLVVTPTNSLRTSFTDMP GWSVKTADHQLGFYLG+DSEMRKTAGSIRTL VDVIIIEEAAYMPLRTLSMILAAA CSGTHVIGTYDTHQLQPVC+SSG SIS DNVDR+VILEKAFP CFHVFARKRDKT EEQVEMDDGLLYILAAG++S EAQTRAIERFG C ++PSPS+FHLAYTRDCARFHAFRGL GC+ GGWD LGR TV+GAQYRDLGNLGK+HKNHTY I+RSSADE+ Sbjct: 269 GGNYFRNLFSVLLDRDVGSEEFDTWLSGVSEPPALTLRDLEKWLNKTRANVVVWSHRGSGDHVLGPIDKKTDLRPRALHVGVREGHVYRLELDGPWRDRFGSSLDVAIEHSVKTQRRFRRIAEAVEEKDKPDTTDCGSKKTFLCVADIVSDLMAINQSEEENGHQQAARKKRKRGKRRSEFNTWYAPPGTVLDELMLHLHLVGVSCRGRLTSYSHWDSLSLPAHGITIRTWCSASMGGLDPDELEPDQATRLIELHNELGLKFYHGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMEVVPVFGHVDEVEEYDDHGIEDWTLYIIELDAFGKPDVFFNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPKLVRDLLAHEPGDPFLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGDETKTPGTLRFEPALKNPLGDERRVFGGIKTKISLDALPPAMRRILCPPKHRMRVIPLWDGIGGGFSSMDHVHDAWRSLERNA-KRNLWPEICEAESPSNLESLIRAHMLQQGSRLVCAVTGEHGGAGKSYCATRAATAIFKTGLVVTPTNSLRTSFTDMPCGWSVKTADHQLGFYLGDDSEMRKTAGSIRTLNVDVIIIEEAAYMPLRTLSMILAAAHCSGTHVIGTYDTHQLQPVCDSSGRSISKDNVDRRVILEKAFPLCFHVFARKRDKTVEEQVEMDDGLLYILAAGDDSHEAQTRAIERFGGGCL--DNPSPSDFHLAYTRDCARFHAFRGLLGCDEAGGWDGLGRQTVVGAQYRDLGNLGKVHKNHTYKIIRSSADEV 1224
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI) HSP 1 Score: 1060 bits (2741), Expect = 0.000e+0 Identity = 556/816 (68.14%), Postives = 610/816 (74.75%), Query Frame = 2 Query: 239 GTTSFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEP------------------------------------------------------------DVFLNADVTP------------------VF-GRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVIPLWGGVGAGFSSMGDAHNAWCSLEKKSTKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI 2449 G FRNLYSILLERDIGE EFDTWVSGD +PP LTL HL KWL+ T A+VVVWSHRGTGA++ GPSD KTNL+ PTLHVGVREGHVYRLVL GPW +RFGS +DV I++ +RT+R+FRRI+E T EE+EPD TG TKTFSCVADIVSDI+A N+T R K SE KTWYAPPGTALDELMLHLHL GVSC AHG+ IRTWCSASMGGLDPD+FEPDQATRLIELHNALGLKF+RGVLDFRVS QYSQSLLALLEVCWRGPIVGAED SGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGH+IEDWTLYII LDAL+ +F D TP VF G K LD + A R ++ ++P LVIPLW GVG GFSSM +AH+AW L K TKRN+WPEICEAESPSKLE+LLRG LS+QGSR+VCAVTGEHGGAGKSYCAF AAK IFKTGLVVTPTNSLRTSFT++P+GW+VKTADHQLGFYLG+DS ++KTAGSIR LKVDVIIIEEAAYMPLRTLSM+LAAA SGTHVIGTYDTHQLQPVCESSGMSIS DNV+RK ILEKAFPTCFHVFARKRDKT +EQVEMDDGLL+ILAAGN+S EAQTRAIERFG C +DPSPS+FHLAYTRDCARF+AFRGL GCN GGWD LG TV+GAQYRDLGNLG++HKNH YNI+RSS D + Sbjct: 267 GGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQLPTLHVGVREGHVYRLVLEGPWGDRFGSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFVTKTFSCVADIVSDIMAINETGGDHNRQPVEKRKHGR-KVSESKTWYAPPGTALDELMLHLHLAGVSCE---------------AHGVIIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSRQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALERTWYRDGFWALGALILDETRLRVLEARNALELCGASDFSFQCDAVFFRGCSSVQEKMRLRFNQLFSGNDKTPGTLKFEPALKNPLCGERRVFEGIVVKLSLDALPPAMR-KIPCPLKPR---------LLVIPLWDGVGTGFSSMEEAHSAWRRLGKN-TKRNMWPEICEAESPSKLENLLRGSLSRQGSRIVCAVTGEHGGAGKSYCAFNAAKNIFKTGLVVTPTNSLRTSFTNLPTGWNVKTADHQLGFYLGDDSHVKKTAGSIRALKVDVIIIEEAAYMPLRTLSMVLAAAHSSGTHVIGTYDTHQLQPVCESSGMSISRDNVNRKFILEKAFPTCFHVFARKRDKTVDEQVEMDDGLLHILAAGNDSHEAQTRAIERFGGGCL--DDPSPSDFHLAYTRDCARFYAFRGLLGCNESGGWDVLGHKTVVGAQYRDLGNLGRVHKNHNYNIIRSSGDTV 1053
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 1052 bits (2720), Expect = 0.000e+0 Identity = 576/1018 (56.58%), Postives = 622/1018 (61.10%), Query Frame = 2 Query: 239 GTTSFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTLVIPLWGGVGAGFSSMGDAHNAWCSLEKKSTKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI 2449 G FRNLYSILLERDIGE EFD WVSGDT+PP LTLRHL KWL+ TKA VVVWSHRGTGA++ GPS+ KT+LRPPTLHVGVREGHVYRLVL G WR+RFGS +DV +E+ +RT+R+FRRI+E TEEEEEPD TG GTKTFSCVADIVSDI+A QT K SE KTWYAPPGTALDELMLHLHL GVSC G+L+NYS WDSLSLPA GI IRTWCSASMG LDPD+FEPDQATRLIELH+ALGLKFYRGVLDFRVSSQYSQSLLALL VCWRGPIVGAED SGS YGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGH+IEDWTLYII LDAL EPDVFLNADVTPVFGRNYKRYLDLID APRHRVTHFVRPSRTV +CHI P LV+PLW G+G F+SM AH+AW L K TKR+LWPEICEAESPSKLE L RG+LS QGSR+ CAVTGEHGG GKSYC RAA F+TGLV+TPTNSLRTS+T++PSGWS TAGSIRTLKVDVIIIEEAAYMPLRTLSM++AAA SGTHVIGTYD HQLQPVC+SSGMSIS DNVDRKVILEKAFP CFHVFARKRDKT E+QVEMDDGLL+ILAAGN+S EAQTRAIERFG C +PSPS+FHLAYTRDCARFHAFRGL GCN GGWD+LG T++GAQYRDLG GKIHKNHTY+I RSSADE+ Sbjct: 265 GGNYFRNLYSILLERDIGETEFDKWVSGDTEPPALTLRHLEKWLSMTKAGVVVWSHRGTGANILGPSEGKTSLRPPTLHVGVREGHVYRLVLEGRWRDRFGSSLDVAVEHRVRTYRKFRRISEMTEEEEEPDVTGIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDASGSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALGEPDVFLNADVTPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSKCHISKLVRDLLAHELGDPLLEDADCARRFKKGIFVRASGMLQQRYADRIDAVMVTSTDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAYLCFDAERTWYRDGFWALGAXDEASAVGGKIVPVLCEVDRVKAELRTGQGALGIESLRTGDAYLCFEAERTWYRDGFWALGTLILDETRLRVLEARNALESFGASDFSYQCDAVFFRGSSSVQDKMRLRFDHLFSGDEKTPGTLKFEPALKNPLTGESRVFEGIVVKLSLDALPPAMRKIPCPLKPPFLVVPLWDGIGTRFNSMEGAHDAWRRLGKH-TKRDLWPEICEAESPSKLECLFRGMLSPQGSRIACAVTGEHGGTGKSYCTIRAATATFETGLVLTPTNSLRTSYTNLPSGWS--------------------TAGSIRTLKVDVIIIEEAAYMPLRTLSMVMAAAYGSGTHVIGTYDVHQLQPVCDSSGMSISRDNVDRKVILEKAFPMCFHVFARKRDKTIEDQVEMDDGLLHILAAGNDSHEAQTRAIERFGGRCHF--NPSPSDFHLAYTRDCARFHAFRGLLGCNELGGWDSLGHATLVGAQYRDLGKSGKIHKNHTYSITRSSADEV 1259
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Match: A0A6H5JTS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS3_9PHAE) HSP 1 Score: 956 bits (2471), Expect = 0.000e+0 Identity = 522/913 (57.17%), Postives = 577/913 (63.20%), Query Frame = 2 Query: 239 GTTSFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIPLWGGVGAGFSSMGDAHNAWCSLEKKSTKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI 2449 G F+NL+ +LL RD+G EEF W++G ++PP LR L KWL TKANVVVWS+RG+G V GP D+KT+LRP LHVGVREG VYRL L GPW RFGS +DV IE+ +RT RRFRR AE EE+EEPD T CG+K F+CV DIVSD++A N++E KR K SE WYAPPGTAL+ELMLHLHLVGVSC GRLS+YSHWDSLS+PAH TRLIELHN LGL+F GVLDFRVSSQYSQSLLALL+VCWRGPIVGAE+VSG+SYG EDWQCDINGAHTAALM+M VPVFGH+DEVEE+ HDIEDWTLY I LDAL +PD LNADVTPVFGRNYKRYLDL+DTA RHRVTHFVRPSR V CHIPTL VIPLW G+G GFSSM H+ W SLEK + KRNLWPEI EAE +V A T + KSYCA RAA IFKTGLV+TPT+ LRT+FTDMP GWSVKTADHQLGF LGN S +RKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAA SGTHVIGTYDTHQLQPVC+SSGMSIS NVDR+VILEKAFP CFHVFARKRDKT EEQVEMDDGLLYILAAG++S EAQTRAIERFG E PT +DPSPS+FHLAYTRDCARFHAFRGL GC+ GGWD LGR TV+GAQYRDLGNLGK+HKNHTY+I+RSSADE+ Sbjct: 205 GGNYFQNLFPVLLGRDVGSEEFGMWLAGVSEPPARKLRDLEKWLIKTKANVVVWSYRGSGDHVLGPIDKKTDLRPRGLHVGVREGDVYRLELDGPWCNRFGSSLDVAIEHSVRTQRRFRRTAEAIEEKEEPDTTECGSKAFTCVTDIVSDLMAINKSEVEDGPQQAARKKRKRGKTSEFNMWYAPPGTALEELMLHLHLVGVSCRGRLSSYSHWDSLSVPAH------------------------VTRLIELHNELGLQFSHGVLDFRVSSQYSQSLLALLKVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMAVVPVFGHVDEVEEYHDHDIEDWTLYKIELDALGKPDELLNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPTLAKDLLAHELGDRLLQDADCARKFKKGTFVRASGMLQQRYADRIDAVMVTGCDEAFAVGGKIVPVLGEVDRVKDELRTGQEKLGIESLRTGDTYLCLDAEQTWNALESCGTSDFSYQCDAVFFRGSSSVQEKMRLRFSDLIRYDERRVLGGIKAKISLDALSPAMRRIPCPPKHCLRVIPLWDGIGGGFSSMEYVHDVWRSLEKNA-KRNLWPEIGEAE------------------KVFSAPTCSN----KSYCATRAATAIFKTGLVLTPTSILRTAFTDMPCGWSVKTADHQLGFSLGNGSHVRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAAHSSGTHVIGTYDTHQLQPVCDSSGMSISKANVDRRVILEKAFPICFHVFARKRDKTVEEQVEMDDGLLYILAAGDDSHEAQTRAIERFGGEFPTASDPSPSDFHLAYTRDCARFHAFRGLLGCDEAGGWDGLGRQTVVGAQYRDLGNLGKVHKNHTYDIIRSSADEV 1070
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI) HSP 1 Score: 948 bits (2450), Expect = 0.000e+0 Identity = 506/965 (52.44%), Postives = 592/965 (61.35%), Query Frame = 2 Query: 239 GTTSFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERF--------GSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPLWGGVGAGFSSMGDAHNAWCSLEKKSTKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI 2449 G FRNLYSI+LERD+G EF W+SG+ P +T+RHL KWL TTKA+VVVWSHRG+GA+V G + T+LRP LHVGVREGHVYRLVL GPW++RF G + V +E+ +RT R FRRIAE EE E +++ T+ F AD+ IL ++QT+ +KA KTWYAPPGTALDELMLHLHL GV+C+GRL++YSHWDSLSLPAHGI IRTWC ASMGGLDPD E D+ATRLIELH LG K RGV+DFRVSS+YS SLLALLEVCWRGPIVGAED SG++YG DWQCDINGAHTAA+++ME +P F HMDEV+ FDGHDIEDWTLY++ L+A+ +PDVFLNADVTPVFGRNYKRYL LI T HRV+HFVRP+RT+ +CHIP LV +PLWGG+G F +M AH AW S+ K KR +WP+IC AESP+ LE LLR L+SQ+ RVVCAVTGEHGGAGKSYCA RAAK +FKTGLV+TPTNSLRTS+TD+PSGWSVKTADHQLGF++G+D+ +RKTAGSI +VDV+IIEEAAYM L LSMI AA SG HVIGTYDTHQLQPV ESSGMSIS DNVDR+++LE+AFPTCFH+FARKRD+T +EQVEMDD LLYIL AG+NS EAQTRA+ERFG PTG S+FHLAYTR+CARFHAFRGL CN GGWDALG++ V+GAQYRDLG GK+HKNH Y+IVRSSAD + Sbjct: 274 GGNYFRNLYSIMLERDVGSTEFSAWLSGEECVPAVTVRHLDKWLKTTKASVVVWSHRGSGAEVVGAKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREGAVGPSLHVAVEHCVRTRRLFRRIAEAAEEGEGEEKSDGDTRAFGRCADMTEAILTSSQTDTDQQTARKRRRGTD-DKADSKKTWYAPPGTALDELMLHLHLGGVACAGRLTSYSHWDSLSLPAHGIIIRTWCGASMGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLSMENLPAFTHMDEVQVFDGHDIEDWTLYVVRLEAVGDPDVFLNADVTPVFGRNYKRYLALIKTPAPHRVSHFVRPARTIQKCHIPRLVQDLLARDLGEPLLQDPDAARRFKKGLFVRTSGLLQQRHADRINAVMVTTSKEAMAVGGKIVPVLGEVNRIKSELRKNGTDGGLGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARHLYEHCFSGELKAPGTLKFEPALKNAASPDRVFAGIEVKLALDILPPAMRTIPCPRERALRVVPLWGGIGETFGTMEAAHAAWRSVGKDD-KRKIWPDICAAESPATLERLLRELVSQE-DRVVCAVTGEHGGAGKSYCALRAAKAVFKTGLVLTPTNSLRTSYTDLPSGWSVKTADHQLGFFIGDDARVRKTAGSIHIPRVDVVIIEEAAYMSLHALSMIFAATHSSGVHVIGTYDTHQLQPVRESSGMSISVDNVDRQLVLERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAEAQTRALERFGGIEPTGPGTHVSDFHLAYTRECARFHAFRGLTRCNEAGGWDALGQSAVVGAQYRDLGKTGKVHKNHAYHIVRSSADSV 1235
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE) HSP 1 Score: 944 bits (2440), Expect = 0.000e+0 Identity = 534/1007 (53.03%), Postives = 584/1007 (57.99%), Query Frame = 2 Query: 239 GTTSFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPLWGGVGAGFSSMGDAHNAWCSLEKKSTKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI 2449 G FRNLYSILLERDIGE EFD WVSGDT+PP LTL HL KWL TKA+VVV SHRG GA+ GPSD KTNLRPPT+HVGVREGHVYRLVL GPWR+RFGS +DV IE+ +RT+R+FRRI+E TEEEEEPD TG G KTFSCVADIVSDI+A QT K SE KTWYAPPGTALDELMLHLHL GVSC RL+NYSHWDSLSLPAHGI R+WCSASMGGLDPD+FEPDQATRLIELH KF RGVLDFRVSSQYS+SL ALLEVCWRGP+VGAED SGSSYGREDWQCDINGAHTAALMNMETVPV GHMDE PDVFLNADVTPVFGRNYKRYLDLID APRHRVTHFVRPSRTV RCHIP LV IPLW G+G F SM AH+AW L + TKR+L PEICEAE VVCAVTGEHGGAGK +C RAA F+TGLV+TPTN+LRTS+T++PSGWSVKTAD QLGF L +DS ++KTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAA SGTHVIGTYDT+QLQPVC+SSGMSIS DNVDRKVILEKAFPT F+VFAR+RDKT E+QV+MDDGLL+ILAAGN+S EA +RAI+RFG + +PSPS+FHL YTR+CARFHAFRGL GCN G WD LG T +GAQYRDLGN GK+HK H YN++ SSAD + Sbjct: 332 GGNYFRNLYSILLERDIGEVEFDKWVSGDTEPPALTLLHLEKWLYMTKASVVVGSHRGPGANTLGPSDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRFGSSLDVAIEHRVRTYRKFRRISEMTEEEEEPDTTGFGAKTFSCVADIVSDIMAIKQTREDHNRQPVEKERKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCISRLTNYSHWDSLSLPAHGIITRSWCSASMGGLDPDDFEPDQATRLIELH-----KFCRGVLDFRVSSQYSKSLFALLEVCWRGPMVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVLGHMDE------------------------PDVFLNADVTPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVQDLLAHELGDHLLEDDDCARRFKKEIFVRASVTRLRLWVEIVLVLCEVDRVKAELRTGQGDLGIESLRTDDAYICFDAERTWYRDGFWALGILILDETRLRVLEARNALESCGGAVTRLRLWVEIVLVLCEVDRVKAELRTGQGDLGIESLRTDDAYICFDAERTWYRDGFWALGILILDETRLRVLEARNALESCGGSDLSYQCDAVFFRDLRRGDEETPGTLKFGPALKNPLCEERRVFEGIVVKLSLDALPPAMRKIPCPFKPPLSVIPLWDGIGTSFHSMEGAHDAWRRLGRN-TKRDLSPEICEAE-------------------VVCAVTGEHGGAGKRFCTIRAATATFETGLVLTPTNNLRTSYTNLPSGWSVKTADRQLGFNLSDDSYVKKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAAHSSGTHVIGTYDTNQLQPVCDSSGMSISRDNVDRKVILEKAFPTFFYVFARRRDKTIEDQVQMDDGLLHILAAGNDSDEAHSRAIKRFGGQHI--ENPSPSDFHLVYTRECARFHAFRGLLGCNEAGDWDGLGCQTAVGAQYRDLGNPGKVHKIHMYNVIGSSADTV 1287
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Match: A0A6H5K992_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K992_9PHAE) HSP 1 Score: 936 bits (2419), Expect = 0.000e+0 Identity = 507/940 (53.94%), Postives = 584/940 (62.13%), Query Frame = 2 Query: 239 GTTSFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREK---ASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIPLWGGVGAGFSSMGDAHNAWCSLEKKSTKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI 2449 G FRNLYS+LL RD+G EEFDTW++G WL+ TKANVVVWSHRG+G +V GP DEKTNLRPP LHVGVREGHVYRL + GPWR+RFGS +DV IE+ +RT RRFRRIAE EEEE+PD TGCG++ F VADI +I++ ++ + KR++ AS TW +PPGTAL+ELMLHLH+ G+SC G+L+NYSHWDSL+LP+H ITIRTWC+ASMGGLDP++F P +ATRLIEL NALG +FYR V+DF VSSQYSQSLL+LLE+CWRGPIVGAE SG+SYG EDWQCDINGAHTAAL++M+TV VF MDEV+E+D H+IED TLY++ LD +PDV+LNADVTP+ GRNY R + I RHRVTHFVRP+RTV +CHIP + V+PLW G+G F SM D H A S K K +WPE+CE ESP LE LLR L + RVVCAVTGEHGGAGKSYCA RAA IFKTGLVVTPTNSLRTSFTDMP GWSVKT+DHQLGFYLG+DS ++KTAGSIRTLK DVIIIEEAAYMPLRT SMILAAA CSGTHVIGTYD HQLQ V +SSGMS S DNVDR+V+LEKAFP CFH+FARKRDKTTEEQVEMDDGLLYIL AG++ AQTRAIERFG T + SPS+FHLAYTRDCARFHAFRGL GCN GGWD LG ++GAQYRDLG GKI K H Y++VRSSAD + Sbjct: 191 GGNYFRNLYSVLLGRDVGSEEFDTWLAG--------------WLSMTKANVVVWSHRGSGDNVLGPVDEKTNLRPPALHVGVREGHVYRLEVDGPWRDRFGSSLDVAIEHSVRTQRRFRRIAEAVEEEEKPDTTGCGSRAFLRVADIEKEIMSMSRLDKDHDPQSAQ----KRKRGTNASASTTWCSPPGTALEELMLHLHIRGISCRGKLTNYSHWDSLTLPSHDITIRTWCAASMGGLDPNDFRPGEATRLIELQNALGQQFYRRVMDFGVSSQYSQSLLSLLEICWRGPIVGAEQASGNSYGPEDWQCDINGAHTAALLSMDTVSVFALMDEVQEYDDHEIEDSTLYVVRLDDTGDPDVYLNADVTPITGRNYNRCIQQIHRCVRHRVTHFVRPARTVEKCHIPYVARELLTRELGDPLLEGAESARKFKKGIFVRTSGMLQQRYADRIDAVMVTGSDEALAVGGKVVRVLGEVQHVKAGLRTGDKELGFEPLATGDAYLCFEAKRTWFRDGFWALGEEILDRTRLRVLEVRNALESCGASDFSYQFDAVFFKASPAVQDEMRLRFGHLFSDLRKSRLPWHRNQTIPECVTTRIRANPCPPKRVLRVVPLWDGIGTSFPSMDDTHRARLSFTKDQ-KLQIWPEVCEEESPVTLERLLRALKFEV-ERVVCAVTGEHGGAGKSYCATRAATAIFKTGLVVTPTNSLRTSFTDMPCGWSVKTSDHQLGFYLGDDSHVKKTAGSIRTLKADVIIIEEAAYMPLRTPSMILAAAHCSGTHVIGTYDMHQLQTVEDSSGMSTSRDNVDRRVVLEKAFPICFHLFARKRDKTTEEQVEMDDGLLYILGAGHDRHMAQTRAIERFGCGRSTYHH-SPSDFHLAYTRDCARFHAFRGLLGCNELGGWDLLGHAKLVGAQYRDLGRSGKIQKKHIYSVVRSSADTV 1109
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Match: A0A6H5J754_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J754_9PHAE) HSP 1 Score: 936 bits (2418), Expect = 0.000e+0 Identity = 526/939 (56.02%), Postives = 566/939 (60.28%), Query Frame = 2 Query: 239 GTTSFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIPLWGGVGAGFSSMGDAHNAWCSLEKKSTKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFR---GLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEI 2449 G FRNLYSILLERDIGE EFD WVSGDT+PP LTL HL KWL+ TKA+VVVWSHRGTGA++ GP D KTNLRPPT+HVGVREGHVYRLVL GPWR+RFGS +DV IE HR EPD TG G KTFSCVADIVSDI+A QT K SE KTWYAPPGTALDELMLHLHL GVSC G+L+NYS WDSLSLPAHG+ IRTW SASMGGLDPD+FEPDQATRLIELHNALGLKF RGVLDFRVSSQYS+SLLALLEVCWRGPIVGAED SGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGH+IEDWTLYII LDAL VTH+V PSRTV RCHIP L VIPLW G+G F SM A +AW L K TKR+LWPEICEAE +VCAVTGEHGGAGKSYC RAA F+TGLV+TPTNSLRTS+T++PSGWSVKTADHQLGFYL +DS ++KTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAA SGTHVIGTYDTHQLQPVC+SSGMSIS DNVDRKVILEKAFPTCFHVFARKRDKT E+QVEMDDGLL+ILAAGN+S EAQTRAIERFG E + SPS+FHLAYTR+CARFHAF G P GW +GAQYRDLGN K+HKNH YN++RSSAD + Sbjct: 226 GGNYFRNLYSILLERDIGEVEFDKWVSGDTEPPALTLLHLEKWLHMTKASVVVWSHRGTGANILGPPDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRFGSSLDVAIE-----HR-------------EPDPTGFGAKTFSCVADIVSDIMAIKQTGGDHSRQPVEKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGLIIRTWFSASMGGLDPDDFEPDQATRLIELHNALGLKFCRGVLDFRVSSQYSKSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDAL---------------------------------VTHYVGPSRTVSRCHIPKLMKDLLTHELGDPLLEDADYARRVKKRNIRAGQCDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLRTGNAYLCFDAERTWYRDGFWALRTLTLDETRLRVLEARNALESCGASDFSYQCDAVFFRGSSSVQEKMVLRFDHLFTGDEKTPGTLKFGPALKNPLCGERRVCIVVKLSLDALPSAMRKIPCPFKPPLSVIPLWDGIGTSFHSMEGADDAWRRLGKN-TKRDLWPEICEAE-------------------IVCAVTGEHGGAGKSYCTIRAATATFETGLVLTPTNSLRTSYTNLPSGWSVKTADHQLGFYLSDDSYVKKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAAHSSGTHVIGTYDTHQLQPVCDSSGMSISRDNVDRKVILEKAFPTCFHVFARKRDKTIEDQVEMDDGLLHILAAGNDSDEAQTRAIERFGGEHI--ENTSPSDFHLAYTRECARFHAFEVCWGAPKLGTGMGWG-------VGAQYRDLGNPDKVHKNHMYNVIRSSADTV 1084 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17109.1 >prot_C-linearis_contig97.17109.1 ID=prot_C-linearis_contig97.17109.1|Name=mRNA_C-linearis_contig97.17109.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=129bp MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRback to top mRNA from alignment at C-linearis_contig97:467460..471087- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig97.17109.1 ID=mRNA_C-linearis_contig97.17109.1|Name=mRNA_C-linearis_contig97.17109.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3628bp|location=Sequence derived from alignment at C-linearis_contig97:467460..471087- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig97:467460..471087- >mRNA_C-linearis_contig97.17109.1 ID=mRNA_C-linearis_contig97.17109.1|Name=mRNA_C-linearis_contig97.17109.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at C-linearis_contig97:467460..471087- (Chordaria linearis ClinC8C monoicous)back to top |