mRNA_C-linearis_contig97.17105.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Match: D8LL08_ECTSI (IPPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL08_ECTSI) HSP 1 Score: 615 bits (1587), Expect = 2.860e-202 Identity = 314/476 (65.97%), Postives = 366/476 (76.89%), Query Frame = 3 Query: 834 SRVTVGPAEILDVRIFCGTWNVAGRKLDSAEDIGEWLDVDKLDGEGESSDPPDLFVVGFQEVVELSAQNVLMDSFLDTQSRTNSLQWFTHVYAYLAQYGKRHGVKYAMVSEQRLLGTYVLVMATETLCAKIAHVQSAIVPTGLGGYFGNKGAVAIRMEIAGASSLCFVCVHMAAHREYVEARNNEYKLISSRPVFADTSGRLPTDESEETGGSVKDNDKDKRQASTWGSLFAGA--GQVGRSGGMSPTRSSEVKKAIRAAMAFGLPKGAGAAXXXXXXXXSGRSPPTGGKXXXXXXXXXXXXXXXXXXGGAGRYEVEDFAWEPSVRHTDAGLPKTKTILQADIVIWLGDLNYRIAEDVPDEVVFEMLKGDNLDFLRSKDQLNIARASGAAFKEFQEGPLCFPPTYKYIPGTRDFDNRPEKKVRCPSWCDRVLYSLGMQSGNSVKRLGLDRYWSSGPLVSDHMPVSALFRTSLSCAP 2255
+ V V A++LD+R+FCGTWNVAGRKLDSAED+G WLDVDKLD EG++S PPD+FV+GFQEVVELSAQNV+MDSFLDTQSRTNSLQWFTHVYAYLAQYG+R+GV+YAMV+EQRLLGTY+L+MA E LC KIAHVQ+A+VPTGLGGY GNKGAVA+R+E+ G SSLCFVCVHMAAHRE+V ARN EYKLISS+PVFADT GRLP DE+E+ G ++ GQ GRSGGMSPTR+SEVKKAIRAAMAFGLPK G G + GK A EV+DFAW PS AGLPKTKT+LQAD+V W+GDLNYRI E+ PD+ VFEML+ D+L+ L DQL IARASG AF+EFQEGPLCFPP+YKYIPGT+++D RPEKKVRCPSWCDRVLY++GMQ G+SV+RLGL+RYWSSGPLVSDHMP + ++S P
Sbjct: 241 AEVRVEAADVLDLRVFCGTWNVAGRKLDSAEDMGLWLDVDKLDEEGDTSVPPDVFVIGFQEVVELSAQNVVMDSFLDTQSRTNSLQWFTHVYAYLAQYGERYGVRYAMVTEQRLLGTYMLIMAKEDLCPKIAHVQTAVVPTGLGGYLGNKGAVAVRLEVGGRSSLCFVCVHMAAHREHVLARNAEYKLISSKPVFADTDGRLPVDEAEDPAGKDQEXXXXXXXXXXXXXXXXXXXXGQGGRSGGMSPTRNSEVKKAIRAAMAFGLPKRGG----------GGEGRASSGKGDIDGSGSEAEKGARP----AEDVEVDDFAWMPSDEGMSAGLPKTKTVLQADVVFWIGDLNYRITEETPDQEVFEMLQNDDLETLSGLDQLTIARASGTAFQEFQEGPLCFPPSYKYIPGTKEYDQRPEKKVRCPSWCDRVLYAMGMQGGDSVRRLGLERYWSSGPLVSDHMPGEEVAQSSFHGVP 702
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Match: A0A6H5L6C6_9PHAE (IPPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6C6_9PHAE) HSP 1 Score: 598 bits (1542), Expect = 1.700e-194 Identity = 347/634 (54.73%), Postives = 418/634 (65.93%), Query Frame = 3 Query: 834 SRVTVGPAEILDVRIFCGTWNVAGRKLDSAEDIGEWLDVDKLDGEGESSDPPDLFVVGFQEVVELSAQNVLMDSFLDTQSRTNSLQWFTHVYAYLAQYGKRHGVKYAMVSEQRLLGTYVLVMATETLCAKIAHVQSAIVPTGLGGYFGNKGAVAIRMEIAGASSLCFVCVHMAAHREYVEARNNEYKLISSRPVFADTSGRLPTDESEETGGSVKDNDKDKRQASTWGSLFAG--AGQVGRSGGMSPTRSSEVKKAIRAAMAFGLPKGAGAAXXXXXXXXSGRSPPTGGKXXXXXXXXXXXXXXXXXXGGAGRYEVEDFAWEPSVRHTDAGLPKTKTILQADIVIWLGDLNYRIAEDVPDEVVFEMLKGDNLDFLRSK--DQLNIARASGAAFKEFQEGPLCFPPTYKYIPGTRDFDNRPEKKVRCPSWCDRVLYSL--GMQSG----NSVKRLGLDRYWSSGPLVSDHMPVSALFRTSLSCAPEKSMDEPEMEVESLSPRRAAAQAAFESTPFARVALEPPSLEMVLDQKPLQSAAVTITNAGGLKGRFHVCKDSLAGWMRLDGSDRGELGPGEAVEIGIVVDVAEAEAAAEKESNGGPRQ------ACAMLRVEVDAGGSGAFLPVVGTFGD 2687
+ V V A++LD+R+FCGTWNVAGRKLDSAED+G WLDVDKLD EG++S PPD+FV+GFQEVVELSAQNV+MDSFLDTQSRTNSLQWFTHVYAYLAQYG+R+GV+YAMV+EQRLLGTY+LVMA E LC KIA+VQ+A+VPTGLGGY GNKGAVA+++E+ G SSLCFVCVHMAAHRE + ARN EYKLISS+PVFADT GRL DE+E+ G K+ AGQ GRSGG+SPTR+SEVKKAIRAAMAF LPK G P GG A EV+DFAW PS AGLPKTKT+LQADIV W+GDLNYRI E+ PD+ VFEML+ D+L+ LR + G GP P + P + + ++ R + ++S G ++ +S R G+ S P H VSALFRTSL+CAP+K++ EP+++VE LSPRR A+ AA + +PFARV LEPP+L ++LDQ P SA I+N GG+KG FHVCKDSL GW+ LDGS+ GEL PGE VEI IV+D AE ACA+LR+EVD GGSG LPVV GD
Sbjct: 188 AEVRVEAADVLDLRVFCGTWNVAGRKLDSAEDMGLWLDVDKLDEEGDTSVPPDIFVIGFQEVVELSAQNVVMDSFLDTQSRTNSLQWFTHVYAYLAQYGERYGVRYAMVTEQRLLGTYMLVMAKEDLCPKIANVQTAVVPTGLGGYLGNKGAVAVQLEVGGRSSLCFVCVHMAAHREQMLARNAEYKLISSKPVFADTDGRLLVDEAEDPAGKDKEXXXXXXXXXXXXXXXXXXXAGQGGRSGGISPTRNSEVKKAIRAAMAFRLPKRGGGEEGL----------PAGGVSSGKGEIDGSGSEAEKGTRPAEEVEVDDFAWMPSDEGMSAGLPKTKTVLQADIVFWIGDLNYRITEETPDQEVFEMLQNDDLETLRRVWFGSADHRACVGDGVPRVPGGPSLLPAILQVHPRHQGIRSEASRRKRSDARRGATVFSTRWGCRAATLFDDSASR-GIGAPALSCPTTCLH--VSALFRTSLACAPQKTVAEPDVDVEPLSPRRTASIAASKLSPFARVVLEPPTLVLILDQTPSLSAVTEISNTGGIKGAFHVCKDSLPGWISLDGSELGELEPGEKVEITIVIDAAEXXXXXXXXXXXXXXXXXHRPAACAVLRIEVDGGGSGTMLPVVCNLGD 808
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Match: A0A835Z928_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z928_9STRA) HSP 1 Score: 322 bits (824), Expect = 4.030e-87 Identity = 242/658 (36.78%), Postives = 317/658 (48.18%), Query Frame = 3 Query: 864 LDVRIFCGTWNVAGRKLDSAEDIGEWLDVDKLDGEGESSDPPDLFVVGFQEVVELSAQNVLMDSFLDTQSRTNSLQWFTHVYAYLAQYGKRHGVKYAMVSEQRLLGTYVLVMATETLCAKIAHVQSAIVPTGLGGYFGNKGAVAIRMEIAGASSLCFVCVHMAAHREYVEARNNEYKLISSRPVFADTSGRLPTDESEETGGSVKDNDKDKRQASTWG-SLFAGAGQVGRSGGMSPTRSSEVKKAIRAAMAFGLPKGAGAAXXXXXXXXSGRSPPTGGKXXXXXXXXXXXXXXXXXXGGAGRYEVEDFAWEPSVRHTDAGLPKTKTILQADIVIWLGDLNYRIAEDVPDEVVFEMLKGDNLDFLRSKDQLNIARASGAAFKEFQEGPLCFPPTYKYIPGTRDFDNRPEKKVRCPSWCDRVLYSLG-MQSGNSVKRLGLDRYWSSGPLVSDHMPVSALFRT---------------------------------------SLSCAPEKSMDEPEMEVESLSPRRAAAQAAFESTPFARVA-LEPPSLEMVLDQKPLQSAAVT--------ITNAGGLKG------RFHVCKDSLAGWMRLDGSDRGELGPGEAVEIGIVVDVAEAEAAAEKESNGGPR-QACAMLRVEVDA----GGSG 2654
L +RIF GTWN+AG L +AED+ EWL VD GE PPDLF +GFQEV++LSA NV+ DSFLD QSRTN+ +W + YL YGKRHGVKY +S +RLLGTY++VMA +L ++ VQ A V TG+GG GNKGAVAIRM IA +LCFVC HM AHRE V RN EY+ ++ R +F L D + + + ++R S +A +RS ++ + SPP G+G D+G T IL D+V+WLGD+NYRI V E V M+ + LR DQL+ A+G AF +F EG L F PTYK I GTRDFD RPEKK+RCPSWCDR+L+S + + V+R+ L+ YWSSGP VSDH PVSALF SL+ E S+ LSP + AA +T A +A L + VL + ++ AVT + AG + G +HVC+ S W++L G+ P A + I VD+ ++ +NGG ACAML + + GGSG
Sbjct: 115 LSLRIFAGTWNIAGEMLSTAEDLEEWLGVDVCPGES----PPDLFAIGFQEVIDLSAGNVVADSFLDNQSRTNARRWLELIENYLDIYGKRHGVKYRQLSHKRLLGTYIVVMAEASLACRVTDVQRAHVATGIGGKLGNKGAVAIRMVIAREVTLCFVCCHMCAHRENVLQRNAEYRTVTERRLFR----VLAHDALQTRPKYLLASQAEQRMGGLAALSTYAAXXXXXXXXXXXXSRSDDLSASA--------------------------SPPR-----------------RVDYSGSG----------------DSG-GGTIGILDHDVVVWLGDMNYRIGGTVTSEEVGRMVAAGETEALRELDQLSTEMAAGRAFPQFFEGRLSFDPTYKLIRGTRDFDLRPEKKMRCPSWCDRILWSAPHVCNAGPVQRMSLENYWSSGPYVSDHAPVSALFALTLAYMDNPQQQDRLLXXXXXXXXXXXXXADKLKREWQEWSLAQVEELSLAHSTQSTLCLSPPLTSGYAAVMATATAALASLRIVAAPGVLTVQDIERTAVTSLFVQLIDVPPAGAVAGGGDVPLAYHVCESSRPPWIQLFGASGTLNAPDTASDGLIEVDIDPSKIEFRPRANGGGYLPACAMLVITISDVRTDGGSG 704
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Match: A0A7R9U3C0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3C0_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.030e-50 Identity = 154/486 (31.69%), Postives = 232/486 (47.74%), Query Frame = 3 Query: 870 VRIFCGTWNVAGRKLDSAEDIGEWLDVDKLDGEGESSDP-PDLFVVGFQEVVELSAQNVLMDSFLDTQSRTNSLQWFTHVYAYLAQYGKRHGVKYAMVSEQRLLGTYVLVMATETLCAKIAHVQSAIVPTGLGGYFGNKGAVAIRMEIAGASSLCFVCVHMAAHREYVEARNNEYKLISSRPVFADTSGRLPTDESEETGGSVKDNDKDKRQASTWGSLFAGAGQVGRSGGMSPTRSSEV--KKAIRAAMAFGLPKGAGAAXXXXXXXXSGRSPPTGGKXXXXXXXXXXXXXXXXXXGGAGRYEVEDFAWEPSVRHTDAGL-----PKTKTILQADIVIWLGDLNYRIAEDVPDEVVFEMLKG--DNLDFLRSKDQLNIARASGAAFKEFQEGPLCFPPTYKYIPGTRD--FDNRPEKKVRCPSWCDRVLYSLG-----------------MQSGNSVKR--LGLDRYWS-SGPLVSDHMPVSALF 2231
VRIFCGTWNV G+ + +G W++ DP PD+ V+G QE+V+LSA NV+M+S D +++ N +W + +A+ G G +Y +V+ + ++G +LV A++ L I+ +Q +IVPTG GG GNKG V IR +I + + FV H+ AHR V RN +++ I+++ +F + V R G +S + SS + K+ + P+G S TG + E+ A SV +GL + +L D+V W+GDLNYRI E V + V++++ D L+ L DQLN R++G +F+ F EG L F PTYKYIPG + +DNRPEKK+RCPSWCDRVL+ ++ N R + L +Y + G +SDH+PV+A+F
Sbjct: 4 VRIFCGTWNVNGKVEEDYYGLGNWINC--------GLDPVPDMLVIGLQEMVDLSAVNVMMESATDGKAKGNMDKWSNVMRIAIARQGGACGKRYELVAAKHMVGICLLVFASDELIPHISGIQKSIVPTGAGG-LGNKGGVCIRADIYD-TQVAFVSSHLYAHRSKVAERNGDFQNIATKKIFRN--------------------------------------MVLRPGNLSNSLSSPILSKEGLPGEKDKAQPRGVFGNLLAFQGAVSASVDSTGDR--------------------------EEKAEGGSVDGASSGLNGNLEEDMQCVLDHDLVFWMGDLNYRIVEGVELDEVYQLINSGDDGLEKLIELDQLNQERSAGRSFRGFHEGRLRFGPTYKYIPGEKPQRYDNRPEKKMRCPSWCDRVLWRQPPGTMVSYDQFASVDPRPVRETNEAFRESVQLLQYRAVMGLAISDHVPVNAVF 415
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Match: A0A7S2SHQ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHQ8_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.400e-45 Identity = 141/467 (30.19%), Postives = 211/467 (45.18%), Query Frame = 3 Query: 858 EILDVRIFCGTWNVAGRKLDSAEDIGEWLDVDKLDGEGESSDPPDLFVVGFQEVVELSAQNVLMDSFLDTQSRTNSLQWFTHVYAYLAQYGKRHGVKYAMVSEQRLLGTYVLVMATETLCAKIAHVQSAIVPTGLGGYFGNKGAVAIRMEIAGASSLCFVCVHMAAHREYVEARNNEYKLISSRPVFA-DTSGRLPTDESEETGGSVKDNDKDK-RQASTWGSLFAGAGQVGRSGGMSPTRSSEVKKAIRAAMAFGLPKGAGAAXXXXXXXXSGRSPPTGGKXXXXXXXXXXXXXXXXXXGGAGRYEVEDFAWEPSVRHTDAGLPKTKTILQADIVIWLGDLNYRIAEDVPDEVVFEMLKGDNLDFLRSKDQLNIARASGAAFKEFQEG----PLCFPPTYKYIPGTRDFDNRPEKKVRCPSWCDRVLYSLGMQSGNSVKRLGLDRYWSSGPL-VSDHMPVSALFRT 2237
E+ D++IFCGTWNV G+K D ED+ WL ++ PD++ +GFQE+V+L+A NV+ D +S+ S +W + L V+Y++V E+ L+G + + +A V S V G+ G GNKG +IRM + ++LCFV H+AAHR+ V RN ++ I + VF + +GR+ +SE G+ + DK R + WG RS GMS K+ I+ D+V ++GD NYRI E +P E VFE + +L FL DQLN+ R+ G F+ F+EG FPPTYK+ P T +++ RP+KK+R P+WCDRV++ + + Y+S L +SDH PV+ALF +
Sbjct: 41 ELRDIKIFCGTWNVNGKKPDPEEDLALWLQPEQN---------PDIYCLGFQEIVDLNAVNVVADG----KSKERSSKWSEVIETTL---NSSPDVQYSLVHEKHLVGIMLCIFVRVEHMQHLASVASQTVGVGVMGMMGNKGGASIRMRLRD-TTLCFVAAHLAAHRDNVAGRNADFANIIQKTVFIHEGNGRVVGADSE---GADPETDKAAIRPSDEWG----------RSAGMSG--------------------------------------------------------------------------------------KSLGIMDHDLVFFIGDFNYRIVESIPTEDVFERVTQGDLAFLWKNDQLNLERSQGNVFQAFEEGLDPDNPPFPPTYKFQPKTSEYEQRPDKKLRAPAWCDRVMWHA-----KTKDHIDQQSYFSVTELKISDHKPVAALFNS 386
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Match: A0A4D9D9A4_9STRA (Rho-GAP domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9A4_9STRA) HSP 1 Score: 186 bits (472), Expect = 6.610e-45 Identity = 147/464 (31.68%), Postives = 202/464 (43.53%), Query Frame = 3 Query: 858 EILDVRIFCGTWNVAGRKL--DSAEDIGEWLDVDKLDGEGESSDPPDLFVVGFQEVVELSAQNVLMDSFLDTQSRTNSLQWFTHVYAYLAQYGKRHGVKYAMVSEQRLLGTYVLVMATETLCAKIAHVQSAIVPTGLGGYFGNKGAVAIRMEIAGASSLCFVCVHMAAHREYVEARNNEYKLISSRPVFADT--SGRLPTDESEETGGSVKDNDKDKRQASTWGSLFAGAGQVGRSGGMSPTRSSEVKKAIRAAMAFGLPKGAGAAXXXXXXXXSGRSPPTGGKXXXXXXXXXXXXXXXXXXGGAGRYEVEDFAWEPSVRHTDAGLPKTKTILQADIVIWLGDLNYRIAEDVPDEVVFEMLKGDNLDFLRSKDQLNIARASGAAFKEFQEGPLCFPPTYKYIPGTRDFDNRPEKKVRCPSWCDRVLYSLGMQSGNSVKRLGLDRYWSSGPLVSDHMPVSALFRT 2237
E V +FCGT+NV + + + + + EWL D + + D+F VGFQEVV+L+A NV MD +S+ + W + A L KR +Y +V+E+ L+G +LV K+ V A V GL G GNKG V++R++ S LCFVC H+AAHRE VE RN+++ I + +F D SG T G G V + E +K EV D ++ L +IL D+V ++GDLNYR+ E V E F LK +LDFL+ DQLN+ R G F F E PL F PTYKY PGT ++ RPEKK+RCP+WCDR+L+ + V+ L R +SDH PV+A T
Sbjct: 43 EYRTVTVFCGTYNVNAKIIADEEVQRLEEWLFPD-------AGELADIFAVGFQEVVDLNAVNVAMDG----KSQQRAQAWQDKLDAVLNN--KRREERYVLVAERHLVGILLLVFVKGVHSKKVREVYGASVGVGLMGMAGNKGGVSMRLKFYD-SYLCFVCAHLAAHRENVEGRNSDFTNILQKTIFVDKALSGEADTP-------------------------VTGQGDV----------TEETRKYFS--------------------------------------------------------EVLD---------VESTLQTGISILDHDVVFFMGDLNYRLDESVDTEECFAKLKAHDLDFLQRYDQLNMERIQGRVFSGFSESPLNFLPTYKYQPGTSSYERRPEKKLRCPAWCDRILWRA--KEPEQVRCLSYRRAELG---LSDHKPVAAQLLT 387
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Match: A0A836C9N6_9STRA (Inositol 5-phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9N6_9STRA) HSP 1 Score: 182 bits (462), Expect = 6.000e-44 Identity = 143/461 (31.02%), Postives = 205/461 (44.47%), Query Frame = 3 Query: 870 VRIFCGTWNVAGRKLDSAEDIGEWLDVDKLDGEGESSDPPDLFVVGFQEVVELSAQNVLMDSFLDTQSRTNSLQWFTHVYAYLAQYGKRHGVKYAMVSEQRLLGTYVLVMATETLCAKIAHVQSAIVPTGLGGYFGNKGAVAIRMEIAGASSLCFVCVHMAAHREYVEARNNEYKLISSRPVFADTSGRLPTDESEETGGSVKDNDKDKRQASTWGSLFAGAGQVGRSGGMSPTRSSEVKKAIRAAMAFGLPKGAGAAXXXXXXXXSGRSPPTGGKXXXXXXXXXXXXXXXXXXGGAGRYEVEDFAWEPSVRHTDAGLPKTKTILQADIVIWLGDLNYRIAEDVPDEVVFEMLKGD-NLDFLRSKDQLNIARASGAAFKEFQEGPLCFPPTYKYIPGTRDFDNRPEKKVRCPSWCDRVLYSLGMQSGNSVKRLGLDRYWSSGPLVSDHMPVSALFRTSLSC 2249
+ IFCGT+NV G+K ++ DIG+WL + G SDP D++ +GFQE+V+L+A NV + + T S+ SL W + YL KY +V L+G + V A E +++ +++++ GNKG VAIR + S+LCFVC H+AAHR V RN ++ I ++ F R P D E F G + +G P GG G E+ F E D+V WLGDLNYRI E V V + ++ L++LR+ DQLN+ R GAAF +F+EG L F PTYKY GT +D RP+KK+R P+WCDRVL+ + + + V+ L DR + +SDH PV+A+ + C
Sbjct: 94 MNIFCGTFNVNGKK-EAGADIGQWLRWKRKAG---GSDP-DIYAIGFQEIVDLNAVNVAVTN---TNSQQRSLLWRAAIQQYLDTLES----KYYLVEHLPLVGVMLCVFAKEEYRSRLRNIEAS--------KMGNKGGVAIRFMLYD-STLCFVCAHLAAHRGNVLGRNADFNSILTKVAF-----RAPPDVEWE---------------------FRGLERT----------------------PYGRPN-------------------------------------MEQKGGGGVQEMPTFGIEDH-----------------DVVFWLGDLNYRIIEKVATSEVLKRVRSPAGLEYLRACDQLNLERKKGAAFADFEEGVLTFQPTYKYEVGTNHYDERPDKKLRAPAWCDRVLWRIQDPASDLVQLLSYDR---AELTLSDHKPVAAVLEAQIRC 428
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Match: A0A2R5GZG0_9STRA (Inositol polyphosphate 5-phosphatase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZG0_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.060e-42 Identity = 167/571 (29.25%), Postives = 258/571 (45.18%), Query Frame = 3 Query: 867 DVRIFCGTWNVAGRKLDSAEDIGEWLDVDKLDGEGESSDPPDLFVVGFQEVVELSAQNVLMDSFLDTQSRTNSLQWFTHVYAYLAQYGKRHGVKYAMVSEQRLLGTYVLVMATETLCAKIAH--VQSAIVPTGLGGYFGNKGAVAIRMEIAGASSLCFVCVHMAAHREYVEARNNEYKLISSRPVFADTSGRLPTDESEETGGSVKDNDKDKRQASTWGSLFAGAGQVGRSGGMSPTRSSEVKKAIRAAMAFGLPKGAGAAXXXXXXXXSGRSPPTGGKXXXXXXXXXXXXXXXXXXGGAGRYEVEDFAWEPSVRHTDAGLPKTKTILQADIVIWLGDLNYRIAEDVPDEVVFEMLKGDNLDFLRSKDQLNIARASGAAFKEFQEGPLCFPPTYKYIPGTRDFDNRPEKKVRCPSWCDRVLYSLGMQSGNSVKRLGLDRYWSSGPL-VSDHMPVSALFRTSLSCAPEKSMDEPEMEVESLSPRRAAAQAAFESTPFARVALEPPSLEMVLDQKPLQSAAVTITNAGG----LKGRFHVCKDSLA---GWMRLDGSDRGELGPGEAVEIGIV 2549
D+++F TWNV G+K +E + L V ++ PD++V GFQE+V+L+A NV+MDS S+ + W + A L + G+ Y +++ + L+G V V A++ VQ+AI TG+ G GNKG V++R ++ ++ CFVC H+AAHRE VEARN +Y+ I + F D + L +EE + D A+T M P +A A+ +G G A + T + GAG +D S+ +T +I D V WLGD NYRI + VF + ++L +LR DQL +A+G F F+EG + F PTYK+ GT +D RPEKKVR P++CDR+L+ +G S + + +Y S L +SDH PV +F + E+ R +E+ ++ +EP ++ + ++ TI A + RF + LA W+RLD D G + PGE E+ ++
Sbjct: 85 DLKLFVTTWNVNGKK--PSESLEALLSVG-------GAERPDIYVCGFQELVDLTAGNVVMDS----ASKDRTSTWVDAIGATLKRMYGGEGLHYKLLTARNLVGVMVCVFVNRAHVARVPQLSVQTAITATGVMG-MGNKGGVSLRFQLYD-TTFCFVCAHLAAHREAVEARNADYRNIMLKTTFKDDAQTLVHRSAEERLAAPSD-------ATT----------------MLPDGHGVYNRANDGALGPASVRGGGLAPATMPGFGAVGPDDTDSEAGETSAGMGAGDGGSGNTAGAGG--EDDMLQHSSLNLAPVLAEQTFSIADHDYVFWLGDFNYRIVMPHSIDEVFRHVDANDLAWLRRNDQLLSEQAAGRTFVGFKEGEIEFLPTYKFQAGTNQYDRRPEKKVRAPAFCDRILWRD--VNGASAR---IQQYVSCPTLTISDHKPVIGIFEARVKEVVPSDRSRVFQEIVRQLDR-------WENAERPQLQVEPQTITFEGGLRYMERREETILLANTCNVPVTWRFVPNMEDLAICKPWLRLD-PDFGLIPPGERAEVRVI 602
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Match: A0A5D6XQQ9_9STRA (Rho-GAP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQQ9_9STRA) HSP 1 Score: 177 bits (449), Expect = 5.350e-42 Identity = 140/456 (30.70%), Postives = 193/456 (42.32%), Query Frame = 3 Query: 873 RIFCGTWNVAGRK--LDSAEDIGEWLDVDKLDGEGESSDPPDLFVVGFQEVVELSAQNVLMDSFLDTQSRTNSLQWFTHVYAYLAQYGKRHGVKYAMVSEQRLLGTYVLVMATETLCAKIAHVQSAIVPTGLGGYFGNKGAVAIRMEIAGASSLCFVCVHMAAHREYVEARNNEYKLISSRPVFADTSGRLPTDESEETGGSVKDNDKDKRQASTWGSLFAGAGQVGRSGGMSPTRSSEVKKAIRAAMAFGLPKGAGAAXXXXXXXXSGRSPPTGGKXXXXXXXXXXXXXXXXXXGGAGRYEVEDFAWEPSVRHTDAGLPKTKTILQADIVIWLGDLNYRIAEDVPDEVVFEMLKGDNLDFLRSKDQLNIARASGAAFKEFQEGPLCFPPTYKYIPGTRDFDNRPEKKVRCPSWCDRVLYSLGMQSGNSVKRLGLDRYWSSGPL-VSDHMPVSALF 2231
R+ GTWNV +K D A + +WL L G + PD+ +G QE+V+L+A NV+++S L +Q S W V A L +Y +V E+ L+G +LV A I V+ A G+ G GNKG VA+R+ + S+LCFVC H+AAHRE V RN +Y I S+ F +D+D D +WG+ + + EP+ IL D V WLGDLNYRIA+DVP +VVF+ + L +DQL + R G AF+ F+EG + FPPTYKY GT ++ RPEKK+R P+WCDRVL+ + + L Y + L +SDH PV A F
Sbjct: 62 RVVAGTWNVNAKKPLADDAAKLLQWL----LPPSGGAGLLPDVVALGLQEIVDLNAVNVVVNSTLSSQ---RSAAWEEAVLAALNSVSPAQ--QYKVVMEKHLVGILLLVFVKVEHAAFIRDVRGATAGVGIMGVMGNKGGVAVRLNLYD-STLCFVCAHLAAHRENVAGRNADYLSILSKIEF-------------------RDSDSD-----SWGA-----------------------------------------------------------------------------------DTRQLSGEPA-------------ILNHDFVFWLGDLNYRIADDVPVDVVFQHAESGGFKELLQRDQLTLERKRGRAFRGFKEGAITFPPTYKYQAGTAQYEKRPEKKLRAPAWCDRVLWRA-----KHAEHVALLCYAAVHALDLSDHKPVHAAF 382
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Match: A0A6A3EIF8_9STRA (Type II inositol 1,4,5-trisphosphate 5-phosphatase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EIF8_9STRA) HSP 1 Score: 175 bits (443), Expect = 3.870e-41 Identity = 144/467 (30.84%), Postives = 203/467 (43.47%), Query Frame = 3 Query: 858 EILDVRIFCGTWNVAGRKLDSAEDIGEWLDVDKLDGEGESSDPPDLFVVGFQEVVELSAQNVLMDSFLDTQSRTNSLQWFTHVYAYLAQYGKRHGV------KYAMVSEQRLLGTYVLVMATETLCAKIAHVQSAIVPTGLGGYFGNKGAVAIRMEIAGASSLCFVCVHMAAHREYVEARNNEYKLISSRPVFADTSGRLPTDESEETGGSVKDNDKDKRQASTWGSLFAGAGQVGRSGGMSPTRSSEVKKAIRAAMAFGLPKGAGAAXXXXXXXXSGRSPPTGGKXXXXXXXXXXXXXXXXXXGGAGRYEVEDFAWEPSVRHTDAGLPKTKTILQADIVIWLGDLNYRIAEDVPDEVVFEMLK-GDNLDFLRSKDQLNIARASGAAFKEFQEGPLCFPPTYKYIPGTRDFDNRPEKKVRCPSWCDRVLYSLGMQSGNSVKRLGLDRYWSSGPLV--SDHMPVSALF 2231
E+ R+ GTWNV +K + D + V L + + +PPD+ +GFQE+V+L+A NV+++S L Q S W V LA + G+ +Y +V E+ L+G +LV + V+ A G+ G GNKG A+R++ +S+LCFVC H+AAHRE V RN +Y I S+ F D++ E+ ++D +GR+ ++ EPS IL D V W+GDLNYRI + + E VF M + G +LD L DQL I R G K FQEGPL FPPTYK+ GT +++ RPEKK+R P+WCDRVL+ +S N VK R ++S P + SDH PV A F
Sbjct: 46 ELRATRVVAGTWNVNAKKPLAPADASKI--VTWLQPQASTREPPDVVALGFQEIVDLNAVNVVVNSALTVQ---RSAAWEEAV---LAALNRHIGISAGGSEQYRVVLEKHLVGILLLVFVRTDHWDHVKEVKGATAGVGIMGVMGNKGGAAVRLKFY-SSTLCFVCAHLAAHRENVAGRNADYLNILSKVQFGDSA--------EDGAAPIQDV-------------------------------------------------------------------------------------------SGRF----WSGEPS-------------ILNHDFVFWIGDLNYRIQDTLTTEEVFRMAESGRSLDKLVQHDQLTIERQRGNVLKGFQEGPLSFPPTYKFQAGTSEYEKRPEKKLRAPAWCDRVLWKA--KSPNDVKL----RSYTSVPALDLSDHKPVHASF 381 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17105.1 >prot_C-linearis_contig97.17105.1 ID=prot_C-linearis_contig97.17105.1|Name=mRNA_C-linearis_contig97.17105.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=865bp MSDGDKSASPVPSQEECDAAYSKARTSLDGRAAPFVPGIGRLSQDFNSIDback to top mRNA from alignment at C-linearis_contig97:412915..424186+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig97.17105.1 ID=mRNA_C-linearis_contig97.17105.1|Name=mRNA_C-linearis_contig97.17105.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11272bp|location=Sequence derived from alignment at C-linearis_contig97:412915..424186+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig97:412915..424186+ >mRNA_C-linearis_contig97.17105.1 ID=mRNA_C-linearis_contig97.17105.1|Name=mRNA_C-linearis_contig97.17105.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5190bp|location=Sequence derived from alignment at C-linearis_contig97:412915..424186+ (Chordaria linearis ClinC8C monoicous)back to top |