Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 695 |
| Cds size | 693 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930828.5591104-CDS-C-linearis_contig97:391073..391766 | 1622930828.5591104-CDS-C-linearis_contig97:391073..391766 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 391074..391766 + |
| 1690881270.8842723-CDS-C-linearis_contig97:391073..391766 | 1690881270.8842723-CDS-C-linearis_contig97:391073..391766 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 391074..391766 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17101.1 >prot_C-linearis_contig97.17101.1 ID=prot_C-linearis_contig97.17101.1|Name=mRNA_C-linearis_contig97.17101.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=231bp
SQLPHAYDLEALVRDDGVLGHALLDRGHKLGLCGAALGGEVLNTLFEDDD
LGHLDGELLAHGGKLSLRRVPVSGGARKTLGEHGGRGLLVDALLARVRKL
GLRAVKLGRGVRNFLAQRHSLLLGVFELLLRDGELLLRRFAPGGFVGEAL
VEGHLLLRDAVLRRLLVEGRLRHAELVTALCKLLSEVAVGGVQCAEVLVE
FGVLLVRGLHLRHRGVALALRRLAMSFVGLG back to topmRNA from alignment at C-linearis_contig97:391074..391767+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig97.17101.1 ID=mRNA_C-linearis_contig97.17101.1|Name=mRNA_C-linearis_contig97.17101.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=694bp|location=Sequence derived from alignment at C-linearis_contig97:391074..391767+ (Chordaria linearis ClinC8C monoicous)
AGCCAATTGCCTCATGCCTATGACCTCGAGGCGCTCGTGCGCGATGATGG
CGTCCTTGGCCATGCCCTCCTCGATCGCGGCCACAAGCTCGGTCTTTGTG
GTGCCGCACTCGGCGGTGAGGTCCTCAACACTCTGTTCGAGGACGACGAT
CTTGGTCATCTGGATGGTGAGCTCCTTGCTCATGGCGGCAAGCTCAGTCT
TCGCCGCGTCCCGGTCAGCGGTGGCGCTCGCAAGACGCTTGGCGAGCACG
GCGGTCGTGGCCTCCTGGTCGACGCCCTTCTTGCGCGTGTCCGTAAGCTC
GGTCTTCGCGCCGTTAAGCTGGGCCGTGGTGTCCGCAACTTTCTGGCACA
GAGACACTCCCTTCTCCTTGGCGTCTTCGAGCTGCTTCTTCGTGACGGCG
AGCTCCTCCTCCGCCGTTTTGCACCTGGAGGTTTTGTCGGCGAGGCGTTG
GTCGAGGGCCACCTCCTGCTTCGTGACGCCGTGCTTCGCCGTCTCCTTGT
GGAGGGCCGTCTCCGCCACGCCGAGCTGGTCACCGCTCTCTGCAAGCTGT
TGTCGGAGGTCGCCGTTGGTGGCGTTCAATGCGCGGAGGTCCTTGTGGAG
TTTGGCGTTCTTCTGGTGCGTGGTCTTCACCTTCGCCATCGCGGCGTCGC
GCTCGCCCTGCGTCGTCTCGCAATGTCTTTCGTTGGCCTTGGCC back to topCoding sequence (CDS) from alignment at C-linearis_contig97:391074..391767+ >mRNA_C-linearis_contig97.17101.1 ID=mRNA_C-linearis_contig97.17101.1|Name=mRNA_C-linearis_contig97.17101.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at C-linearis_contig97:391074..391767+ (Chordaria linearis ClinC8C monoicous)
AGCCAATTGCCTCATGCCTATGACCTCGAGGCGCTCGTGCGCGATGATGG
CGTCCTTGGCCATGCCCTCCTCGATCGCGGCCACAAGCTCGGTCTTTGTG
GTGCCGCACTCGGCGGTGAGGTCCTCAACACTCTGTTCGAGGACGACGAT
CTTGGTCATCTGGATGGTGAGCTCCTTGCTCATGGCGGCAAGCTCAGTCT
TCGCCGCGTCCCGGTCAGCGGTGGCGCTCGCAAGACGCTTGGCGAGCACG
GCGGTCGTGGCCTCCTGGTCGACGCCCTTCTTGCGCGTGTCCGTAAGCTC
GGTCTTCGCGCCGTTAAGCTGGGCCGTGGTGTCCGCAACTTTCTGGCACA
GAGACACTCCCTTCTCCTTGGCGTCTTCGAGCTGCTTCTTCGTGACGGCG
AGCTCCTCCTCCGCCGTTTTGCACCTGGAGGTTTTGTCGGCGAGGCGTTG
GTCGAGGGCCACCTCCTGCTTCGTGACGCCGTGCTTCGCCGTCTCCTTGT
GGAGGGCCGTCTCCGCCACGCCGAGCTGGTCACCGCTCTCTGCAAGCTGT
TGTCGGAGGTCGCCGTTGGTGGCGTTCAATGCGCGGAGGTCCTTGTGGAG
TTTGGCGTTCTTCTGGTGCGTGGTCTTCACCTTCGCCATCGCGGCGTCGC
GCTCGCCCTGCGTCGTCTCGCAATGTCTTTCGTTGGCCTTGGCAGCCAAT
TGCCTCATGCCTATGACCTCGAGGCGCTCGTGCGCGATGATGGCGTCCTT
GGCCATGCCCTCCTCGATCGCGGCCACAAGCTCGGTCTTTGTGGTGCCGC
ACTCGGCGGTGAGGTCCTCAACACTCTGTTCGAGGACGACGATCTTGGTC
ATCTGGATGGTGAGCTCCTTGCTCATGGCGGCAAGCTCAGTCTTCGCCGC
GTCCCGGTCAGCGGTGGCGCTCGCAAGACGCTTGGCGAGCACGGCGGTCG
TGGCCTCCTGGTCGACGCCCTTCTTGCGCGTGTCCGTAAGCTCGGTCTTC
GCGCCGTTAAGCTGGGCCGTGGTGTCCGCAACTTTCTGGCACAGAGACAC
TCCCTTCTCCTTGGCGTCTTCGAGCTGCTTCTTCGTGACGGCGAGCTCCT
CCTCCGCCGTTTTGCACCTGGAGGTTTTGTCGGCGAGGCGTTGGTCGAGG
GCCACCTCCTGCTTCGTGACGCCGTGCTTCGCCGTCTCCTTGTGGAGGGC
CGTCTCCGCCACGCCGAGCTGGTCACCGCTCTCTGCAAGCTGTTGTCGGA
GGTCGCCGTTGGTGGCGTTCAATGCGCGGAGGTCCTTGTGGAGTTTGGCG
TTCTTCTGGTGCGTGGTCTTCACCTTCGCCATCGCGGCGTCGCGCTCGCC
CTGCGTCGTCTCGCAATGTCTTTCGTTGGCCTTGGC back to top
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