mRNA_C-linearis_contig97.17088.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Match: D7FU11_ECTSI (BRO1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU11_ECTSI) HSP 1 Score: 663 bits (1710), Expect = 2.110e-234 Identity = 347/435 (79.77%), Postives = 369/435 (84.83%), Query Frame = 1 Query: 61 MSSPADSELSPALLKVATHVYRFPLPATKLIAFTKCFADNLGADETSKSISSMEQARDDLANELASGMPNYSQAVAGATRYCPLITHVLRSLEKADDVVYLAEPLKFTWATGLGERPRQDWIENEAVVWDKCMVLAAQALSYADTVYNMLEDSQGSKFNEAGVHLRTAAGIFERLHKVELPRWVGETSEKPRLVEADPGICEGLVQFCLAEAQQMAIGKALVAGTTPKTLLARLCEGVRRLLEDSVTAMRKGGASSAYAKLDSPFLVHISFQQCMFRGLAFRFLAENAWAKDEYGVGLAYMMQACRYVEERRDAVSVGLPPLAGPLRNIANDLKTLQGEFRELRDTYAKDNNSIYYEPVPELDMLDPLPQPVMMMKPLPSEEGPPPTKTLSFRATGGIPDGESGGASGLTGADKTKTTEQTDEELARALHEQLNT 1365 M+S ADSELSPALLKVATHVYRFPLPATK+IAFTKCFADNLGA+ETSK+ISSMEQARDDLA+ELASG PNY+QAVAGA RYCPLI HVLRSLEKA+DVVYL EPL FTWATGLGERPRQDWI N+AVVWDKCMVLAAQALSYADTVYNMLEDSQGSKF EAG HLR AAGIFERLHK ELPRWVG+TSE PRLVEA+PGICEGLV FCLAEAQQMAIGKALVAG TPKTLLARLCEGVR LE++V+AMRKGG+SSAY KLDSPFLVHISFQ AC+YVEERRDAVSVGLPPLAGPLRNI++DLKTLQGEFR+LRD YAKDNNSIYYEPVP+LDMLDPLPQPV+MMKPLPSEE PPT+TLSFRATG P E ASGL ADK TDEELARALHE+LNT Sbjct: 1 MASLADSELSPALLKVATHVYRFPLPATKVIAFTKCFADNLGAEETSKAISSMEQARDDLAHELASGTPNYAQAVAGALRYCPLIAHVLRSLEKANDVVYLNEPLSFTWATGLGERPRQDWITNQAVVWDKCMVLAAQALSYADTVYNMLEDSQGSKFTEAGEHLRKAAGIFERLHKAELPRWVGDTSEAPRLVEAEPGICEGLVHFCLAEAQQMAIGKALVAGKTPKTLLARLCEGVRGQLEEAVSAMRKGGSSSAYHKLDSPFLVHISFQHA----------------------------SACKYVEERRDAVSVGLPPLAGPLRNISHDLKTLQGEFRQLRDAYAKDNNSIYYEPVPDLDMLDPLPQPVVMMKPLPSEEEAPPTETLSFRATGSAPGEEPKDASGLPDADK------TDEELARALHEKLNT 401
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Match: A0A836CJ99_9STRA (BRO1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ99_9STRA) HSP 1 Score: 327 bits (839), Expect = 9.190e-103 Identity = 198/407 (48.65%), Postives = 249/407 (61.18%), Query Frame = 1 Query: 61 MSSPADSELSPALLKVATHVYRFPLPATKLIAFTKCF-ADNLGADETSKSISSMEQARDDLANELASGMPNYSQAVAGATRYCPLITHVLRSLEKADDVVYLAEPLKFTWATGLGERPRQDWIENEAVVWDKCMVLAAQALSYADTVYNMLEDSQGSK---FNEAGVHLRTAAGIFERLHKVELPRWVGETSEKPRLVEADPGICEGLVQFCLAEAQQMAIGKALVAGTTPKTLLARLCEGVRRLLEDSVTAMR-KGGASSAYAKLDSPFLVHISFQQCMFRGLAFRFLAENAWAKDEYGVGLAYMMQACRYVEERRDAVSVGLPPLAGPLRNIANDLKTLQGEFRELRDTYAKDNNSIYYEPVPELDMLDPLPQPVMMMKPLPSEEGPPPTKTLSFRA--TGGIPD 1260 M+S + SPA+ K+AT YRFPLPATKLI+F F + NLG T+K+I M+QAR+D+A ELASG PNY VAGA RY PLI L SLE+A D VYL PL+F WA+GLG PR WI N+AVVWDKCM L +QAL++AD+VYNM+ + G + AG LRTAAG+ ELPRWVGET++ R EA PG+CE L CLA+AQQMA+GKAL G TP TLLA+LC GV ++ +++ +R K GA AYAKL P L H +FQ + R LA FLA +AWA++ YG +A+ +RR A L L +L L+ E +Y +DN +IYY+PVP P V+MMKP P PP L FR TGG P+ Sbjct: 1 MASLVEPANSPAVRKLATLTYRFPLPATKLISFHASFESGNLGDPVTAKAIEHMDQAREDMARELASGNPNYQNVVAGARRYVPLIAQTLYSLEQATDPVYLEAPLRFDWASGLGINPRVTWISNQAVVWDKCMALISQALAHADSVYNMVGAAAGGDDAVYAAAGRELRTAAGVLAHTASEELPRWVGETAKGERPPEAVPGVCEALSTLCLAQAQQMALGKALAGGKTPPTLLAKLCGGVADQMDAALSTLRDKAGA--AYAKLAKPLLAHAAFQAALQRALAHLFLASHAWAREAYGAAIAH---------QRRGAAL--LARLXXXXXXXXXELAALRAEAAAALASYERDNGAIYYDPVPGEPAAPP--DGVVMMKPEPYTV--PPLVALRFRPPRTGGEPE 390
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Match: A0A7S3P5Y5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5Y5_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.390e-30 Identity = 104/359 (28.97%), Postives = 169/359 (47.08%), Query Frame = 1 Query: 94 ALLKVATHVYRFPLP---ATKLIAFTKCFADNLGADETSKSISSMEQARDDLANELASGMPNYSQAVAGATRYCPLITHVLRSLEKADDVVYLAEPLKFTWATGLGERPRQDWIENEAVVWDKCMVLAAQALSYADTVYNMLEDSQGSKFNEAGVHLRTAAGIFERLHKVELPRWV--GETSEKPRLV-EADPGICEGLVQFCLAEAQQMAIGKALVAGTTPK-TLLARLCEGVRRLLEDSVTAMRKGGASSAYAKLDSPFLVHISFQQCMFRGLAFRFLAENAWAKDEYGVGLAYMMQACRYVEERRDAVSVGLPPLAGP--LRNIANDLKTLQGEFRELRDTYAKDNNSIYYEPVPE 1143 A +++A V+RF +P A + ++F FA D+T + + S + R+ L + + + V A RY P I ++L S + ++ L + L F W +G+ P+ +EA+++D M +A + L A E S F A AAG+FE LH LP+W+ G + +L E + L A QQMA+ L+ TP LLA+L G+ +LED +R+ S +++D F +SFQ + + L+ F A AW +YG+ +A M +A + R S GLP + L + DL L+ ++ + KDNNS++Y VP+ Sbjct: 21 AAIRLAAVVHRFRVPKMSANRKLSFKTSFATAGRHDKTRRLMQSADDHRERLRESTGAEKISSERVVNDARRYIPQIHNILVSCKVQPEMARLDKKLIFEWMSGIEHNPKA--FISEALMYDLTMAVACEGLGRAAAA---TEKSVAGDFAAASRDYAAAAGVFEYLHADHLPKWISKGSNVDASKLPSECHASTAKALKLLFQANGQQMAVATVLIKPGTPNYALLAKLTLGIAEVLEDFSAYLRRECFESQ-SRMDKDFFTLVSFQTGVQQALSLYFSARAAWDATDYGIAIALMSEATVALRTREAVGSRGLPDITRTPALVVLKQDLHDLRAHCTKVLHEWEKDNNSVFYNAVPQ 373
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Match: UPI000644ADCF (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644ADCF) HSP 1 Score: 79.0 bits (193), Expect = 4.480e-12 Identity = 70/351 (19.94%), Postives = 152/351 (43.30%), Query Frame = 1 Query: 91 PALLKVATHVYRFPLPATKLIAFTKCFADNLGADETSKSISSMEQARDDLANELASGMPNYSQAVAGATRYCPLITHVLRSLEKADDVVYLAEPLKFTWATGLGERPRQDWIENEAVVWDKCMVLAAQALSYADTVYNMLEDSQGSKFNEAGV----HLRTAAGIFERLHKVELPRWVGETSEKPRLVEADPGICEGLVQFCLAEAQQMAIGKALVAGTTPKTLLARLCEGVRRLLEDSVTAMRKGGASSAYAKLDSPFLVHISFQQCMFRGLAFRFLAENAWAKDEYGVGLAYMMQACRYVEERRDAVSVGLPPLAGPLRNIANDLKTLQGEFRELRDTYAKDNNSIYYE 1131 P L V ++ R LP ++ + F K F + +++ +++ R++L + P +A +Y P + ++ + L E + F W++ + + + ++ ++ MVL + +++ + Y++ E S F++ H++ AAGIFE +++VE+PR V +T E +E + + C++ + + KAL GT+ + + CE + + ++ K A + Y +L F +++ + + + +A + YGVGL Y QA + + + P ++I +L E T ++N +Y++ Sbjct: 4 PPELPVKIYMTRLSLPTSQRVQFEKIFRTQ--SPQSNSDLANASALRNELLLVIDKSSPE--AVIASIEKYLPYLYSIVLCCD-TPGTFRLNEHMSFKWSSFISKTFNSGY----SIRFELVMVLMSLGMAHYNRAYDLNESSNEDNFDDNAKLISNHIKIAAGIFEFINRVEIPRGVHQTDEFQ--IECSSNMSLAMTMLCISLGNALTVRKALKQGTSHQVIAKISCEAWHK--SEMTKSLLKDDAHN-YKRLPKTFRNYLTSNLLLQHAITLKEMAMASVDSKHYGVGLTYFSQAMPLLSKIKK-------PSDARQQSIVT---SLMSEIERENQTLTRENQVLYFD 330
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Match: L8HG99_ACACA (BRO1 domain-containing protein n=2 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HG99_ACACA) HSP 1 Score: 75.9 bits (185), Expect = 7.070e-11 Identity = 92/370 (24.86%), Postives = 157/370 (42.43%), Query Frame = 1 Query: 136 PATKLIAFTKCFADNLGADETSKSISSMEQARDDLANELASGMPNYSQAVAGATRYCPLITHVLRSLEKADDVVY--LAEPLKFTWATGLGERPRQDWIENEAVVWDKCMVL------------AAQALSYADTVYNMLEDSQGSKFNEAGVHLRTAAGIFERLHKVEL--------------PRWVGETSEKPRLVEADPGICEGLVQF-------CLAEAQQMAIGKALVAGTTPKTLLARLCEGVRRLLEDSVTAMRKGGASSAYAKLDSPFLVHISFQQCMFRGLAFRFLAENAWAKDEYGVGLAYMMQACRYVEERRDAVSVGLPPLAGPLRNIANDLKTLQGEFRELRDTYAKDNNSIYYEPVP 1140 P TKL AF + + G +ET + + + + R++L + L P A+ Y P ++ L++A +A ++ W + + ++++N V L AA A + + +GSK E L AAGIFE + + ++ GE + R DP + E F CLAEAQQ+A+ KA+ GT+ +LLA+L + + + A++ A + ++S F ++++ +F GL ++ LA +A A EYG +AYM +A V E+ ++ N + E +L YA DN++IYY+ VP Sbjct: 42 PTTKL-AFEQWVRE--GDNETKELLQRISRTREELVSALTRSTPE--AALRSLDAYIPCELGLMEGLDQAAAATGNPVARNIRVCWTSSVSV----NFLKNPMVFNSMSSELFFSYMTAAFLHRAAAAQRFGTIFASQEAFDEGSK--EVARSLCMAAGIFEFIRDTQCLQFKKVRYYFPPLCVQFEGELTVATRHGRLDPPVAEITEHFQTLFINLCLAEAQQIAVQKAMAKGTSD-SLLAKLILDISQKYNIASFALK---AITGVEFVES-FRLYLTLNNLLFSGLTYKHLARDAHANGEYGRAVAYMQKAVGEVPEKPKGRFTD-----AAFQSFVNVYGAERDELVKLAKAYASDNDAIYYDRVP 390
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Match: Q54H07_DICDI (BRO1 domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54H07_DICDI) HSP 1 Score: 73.6 bits (179), Expect = 2.660e-10 Identity = 79/354 (22.32%), Postives = 151/354 (42.66%), Query Frame = 1 Query: 127 FPLPATKLIAFTKCFADNLGADETSKSISSMEQARDDLANELASGMPNYSQAVAGATRYCPLITHVLRSLEKADDVVYLAEPLKFTWATGLGERPRQDWIENEAVVWDKCMVLAAQALSYADTVYNMLEDSQGSKFNEAGV----HLRTAAGIFERLHKVELPRWVGETSEKPRLVEADPGICEGLVQFCLAEAQQMAIGKALVAGTTPKTLLARLCEGVRRLLEDSVTAMRKGGASSAYAKLDSPFLVHISFQQCMFRGLAFRFLAENAWAKDEYGVGLAYMMQACRYVEERRDAVSVGLPPLAGPLRNIANDLKTLQGEFRELRDTYAKDNNSIYYEPVPELDMLDPLPQPV 1176 F LP +K + F K T S +S+ + + E +S + + +Y P + ++ S+E ++ + L E L F+W++ G + + ++ ++ M L AL++ + + + S S F+E HL+ AAGIF + VELPRW+ ++P E G + + CL+ A + KA+ T+P + CE ++ + K +S Y KL +S + F+A N+ A+ + L Y Q + + ++ + + ++ L +I ND+ Q +++N IY+E +++ L P P+ Sbjct: 15 FELPQSKRVQFEKIIRTQTPQSSTHLSQTSLSRNELIIIIEKSS----FQSVITACEKYIPDLYGLMISVED-NNSLRLNEQLSFSWSSITGNK--SSFYSGFSLRFELIMSLVVYALAHYNRASEINDCSNESSFDENAKLMVNHLKIAAGIFNFITSVELPRWMNLPEDRP--TECRQGFSLAMYELCLSTALSITARKAVKQSTSPSIISKLHCEAWQKA--EMTKQFLKDLENSLYKKLPKSLKQIVSNIIIIEYSKTLMFMALNSKAQGKISDALGYFYQV-NFSKIKKPSNT----KISTILNSIVNDVTIEQ-------QALSRENEVIYFEKRTDINSLPEKPSPM 345
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Match: A0A2G4T4R6_RHIZD (pH-response regulator protein palC n=4 Tax=Rhizopus TaxID=4842 RepID=A0A2G4T4R6_RHIZD) HSP 1 Score: 72.0 bits (175), Expect = 9.740e-10 Identity = 88/379 (23.22%), Postives = 159/379 (41.95%), Query Frame = 1 Query: 121 YRFPLPATKLIAFTKCFADNLGADETSKSISSMEQARDDLANELAS------GMPNYSQAVAGATRYCPLITHVLRSLEKADDVVYLAEPLKFTWATGLGER--------PRQDWIENEAVVWDKCMVLAAQALSYADTVYNMLEDSQGSKFNEAGVHLRTAAGIFERLHKVELPRWVGETSEKPRLVEADPGICEGLVQFCLAEAQQMAIGKALVAGTTPKTLLARLCEGVR---RLLEDSVTAMRKGGASSAYAKLDSPFLVHISFQQCMFRGLAFRFLAENAWAKDEYG--VGLAYMMQACRYVEERRDAVSVGLPPLAGPLRNIANDLKTLQGEFRELRDTYAKDNNSIYYEPVP---ELDMLDPLPQPVMMMKP 1191 Y + LP T ++F F + S IS R L N L +YS + Y P + ++ +E + + L + ++ +W T L + PR + + + ++ VL A + +L ++ + +N+A L TAA +F + +P W +P +E + L + LA+AQ +AI KAL + T K+L+A+L GV ++ +T+++ A ++ S + +++ ++ + +FLA +A + G VG A +A + + L A LR + E EL Y N+++ YEPVP +L L P + V+ +KP Sbjct: 3 YPYSLPTTGSLSFVDFFQT---VEPYSLEISDATARRGQLRNVLKEMKKETLSSRDYSLLMNTIEEYLPYLVSIVNCIET--EKLVLKKDIETSWRTTLSDHIIHTGSNAPR---VSCKDIHYELIFVLMTYAYACTLQTNYLLAENNPALYNKAADTLNTAASVFHFIANTVIPSWSNAPENRP--IETVRELAVALSKMALADAQAIAIKKALASNNTSKSLIAKLYMGVADQYQMAHGLITSIK-----GAQDEVSSDLIKYLADGILFYKAMTKKFLAMHANDSQKMGQAVGFAKECKADLRLLQHMSLSKKHLKKSAIALRASHEE-----EEVNELISRYTMINDTVSYEPVPSKQDLQRLIPGGRGVLELKP 361
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Match: A0A654HF19_9CEST (BRO1 domain-containing protein n=3 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A654HF19_9CEST) HSP 1 Score: 65.5 bits (158), Expect = 1.640e-7 Identity = 68/263 (25.86%), Postives = 117/263 (44.49%), Query Frame = 1 Query: 361 LAEPLKFTWATGLGERPRQDWIENEAVVWDKCMVLAAQALSYADTVYNMLEDSQGSKFNEAGVH--LRTAAGIFERLHKVELPRWVGETSEKPRLVEADPGICEGLVQFCLAEAQQMAIGKALVAGTTPKTLLARLCEGVRRLLEDSVTAMR-KGGASSAYAKLDSPFLVHISFQQCMFRGLAFRFLAENAWAKDEYGVGLAYMMQACRYVEERRDAVSVGLPPLAGPLRNIANDLKTLQGEFRELRDTYAKDNNSIYYEPVP 1140 L ++++W+ L +P + + ++ +L A Y+ + +Q S VH LR AAGIF L P+ + P+ + D + + ++ CLAEAQ++AI +A+ A P L+A L E SV + K + +L S + + +F+ C FR A+ F AE+ D+ G+ +A +A ++ E R A +G +A K R L ++ N+ IY++PVP Sbjct: 135 LRRVVRYSWSNSLSRQPTPTSLYD--AYFELFGILFNLAQWYSKHAAKVAASNQVSVEEAVDVHKSLRYAAGIFSHLRDNVAPKI---NVQVPKGADLDRNVLDAYIKQCLAEAQEVAIARAIEAKHDPG-LIAALS------YETSVAYEKCKNCLTGIPEELVSTWRAYFNFKACCFRAYAYCFHAEHQLKVDKGGIAVAAAQEALKHCETARRAARAYA---SGSGAEVAFFRKLQPFATRTLSKAQSE-NSMIYHQPVP 381
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Match: A0A168NB48_ABSGL (pH-response regulator protein palC n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168NB48_ABSGL) HSP 1 Score: 62.8 bits (151), Expect = 9.410e-7 Identity = 82/356 (23.03%), Postives = 149/356 (41.85%), Query Frame = 1 Query: 121 YRFPLPATKLIAFTKCFADNLGADETSKSISSMEQARDDLANELASGMPNYSQAVAGATR----YCPLITHVLRSLEKADDVVYLAEPLKFTWATGLGERPRQDWIENEAVV-----WDKCMVLAAQA--LSYADTVYNML---EDSQGSKFNEAGVHLRTAAGIFERLHKVELPRWVGETSEKPRLVEADPGICEGLVQFCLAEAQQMAIGKALVAGTTPKTLLARLCEGVRRLLEDS--VTAMRKGGASSAYAKLDSPFLVHISFQQCMFRGLAFRFLAENAWAKDEYGVGLAYMMQACRYVEERRDAVSVGLPPLAGPLRNIANDLKTLQGEFRELRDTYAKDNNSIYYEPVP 1140 Y + LP T ++F F + G +S S ++ ++ R + S+ +AG Y P + ++ LE + V L + L+ +W + L + +V ++ VL A +S + Y + D+ +N+A TAA +F + +P+W + ++P VE + L + LA+AQ +AI KAL G K+L A+L GV E + + + RK G ++ S ++S ++ +A ++LA +A + GV + ++ C+ S+ P + A LK + EL + N++ YE VP Sbjct: 3 YNYSLPTTGAVSFADYF-ETTGGHSSSISDATAQRGRLRTVLKGHKKESQESRDLAGIVNAIDDYLPYLLSIINCLETKELV--LRKSLETSWRSTLSDHIIHTGSNAPRIVGTDFHYELVFVLFTYAYCISLQGSEYLLAIPTHDAPDRVYNKAADAFNTAASVFLFVADQVIPKWTAPSDQRP--VETIREVAVALSKMTLADAQSVAISKALFHGKLSKSLAAKLYIGVAGQYEMAYGLISARKSGQ-----EVSSELKKYLSDGTLFYKAMAKKYLALDANDNQKMGVAVGFLRD-CKADLRSVQHSSLSKPHIRKSTTVAARALKE-EALVNELLQRFTMINDTAAYEEVP 346
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Match: A0A077X204_9FUNG (pH-response regulator protein palC n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077X204_9FUNG) HSP 1 Score: 60.8 bits (146), Expect = 2.130e-6 Identity = 60/236 (25.42%), Postives = 109/236 (46.19%), Query Frame = 1 Query: 121 YRFPLPATKLIAFTKCFADNLGADETSKSISSMEQAR-----DDLANELASGMPNYSQAVAGATRYCPLITHVLRSLEKADDVVYLAEPLKFTWATGLGER--------PRQDWIENEAVVWDKCMVLAAQALSYADTVYNMLE-----DSQGSKFNEAGVHLRTAAGIFERLHKVELPRWVGETSEKPRLVEADPGICEGLVQFCLAEAQQMAIGKALVAGTTPKTLLARLCEGV 774 Y + LP T ++F F N+G+ T S ++ ++ R DL + + +Y + Y P + +L LE D + L + ++ +W + L + PR I + ++ VL A +++ +++L+ S +++N+A L AA +F + +P+W +P VE + L + LA+AQ +AI KAL+AG K+L+A+L GV Sbjct: 3 YFYSLPTTGAMSFVD-FLQNVGSYSTEISDATAQRGRLRTVLKDLKRD-SQETRDYRHILNTIEDYLPYLVSILNCLESGD--LTLKKNIETSWRSTLSDHIIHTGSNAPR---IVCGGIYYELIFVLMTYAYAWSMQSHDILKTVQEGSSSPTQYNKAADALNIAASVFHFIAYDVIPKWRQSPENRP--VETIKELPAALSKMALADAQYIAINKALLAGQVSKSLVAKLYIGV 229 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17088.1 >prot_C-linearis_contig97.17088.1 ID=prot_C-linearis_contig97.17088.1|Name=mRNA_C-linearis_contig97.17088.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=436bp MSSPADSELSPALLKVATHVYRFPLPATKLIAFTKCFADNLGADETSKSIback to top mRNA from alignment at C-linearis_contig97:309467..315799- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig97.17088.1 ID=mRNA_C-linearis_contig97.17088.1|Name=mRNA_C-linearis_contig97.17088.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6333bp|location=Sequence derived from alignment at C-linearis_contig97:309467..315799- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig97:309467..315799- >mRNA_C-linearis_contig97.17088.1 ID=mRNA_C-linearis_contig97.17088.1|Name=mRNA_C-linearis_contig97.17088.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2616bp|location=Sequence derived from alignment at C-linearis_contig97:309467..315799- (Chordaria linearis ClinC8C monoicous)back to top |