mRNA_C-linearis_contig97.17081.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Match: D7G2S0_ECTSI (Ornithine decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S0_ECTSI) HSP 1 Score: 646 bits (1666), Expect = 4.440e-224 Identity = 407/651 (62.52%), Postives = 451/651 (69.28%), Query Frame = 1 Query: 1 MDQEPLF--LPLVLDTRVDGSVDFTALSVLPTLHD---SSEDNGRRISQVPVAGSRDWLSSMIEVGRQEV-----SDTAVGSGQRKMSTPSDAFFAVDLECVLHKYRIWHECFPRVKPFYAVKCNPNCEVVGVLAKTTGCGFDCASPAEMDQVLECGVNPSRVIYANPCKDVAALEHALDAGISTMTFDSKDELHKIRRLLDTRAKAKGPERGDANV-QVVLRLRVPDSHSDCPLGEKYGAAEEACSELINLAVELRLSLVGISFHCGSGCQNAQAYPAALAVARSLFDLAARQGVKLTLLDIGGGFPGWDGSESVYQPMPRGEASAREERRGQATLGESTATSSTPSATVQSVFDVGTASTKDSGSDGSGGASGTRVAQADGATGGGEE---GASTPPPP--------LSLAEIARVTVPVLDELFPPGSGVQVIAEPGRYFVEASHLLFARIYAKRSLILASQELGASDQPDGGENESTRTERRKAKTT----AYYIDEGVKGCFKDRLLCGVNFEPCPVSLAGGRRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDAVVMGPSGLPADVVARKRLPKSLKPGDWLYFSQMGAYTASIATVTSSAVLEASYCYVASTPDVGA 1875 M EPL + L+LDT++D +VDFTALS+LP + D +++ + RR+ QVPVAGS+ WL SM+EVGRQE +D + G ST SD FFAVDLECVLHKYR WH+CFPRVKPFYAVKCNPN EVV VLA T GCGFDCASPAEMDQVLECGV+PSR+IYANPCKD+AALEHAL AG++TMTFDSKDEL+KIRRLLDTRAK G+++V Q+VLRLRVPDSHSDCPLGEKYGA EEACSELI+LAVELRL LVGISFHCGSGCQNAQAYP ALAVA+S+FDLAA++GV LTLLDIGGGFPGWDGSE VY+ + +A GGGE+ G S P PP LSLAEIARVT+PVLDELFPPGSGVQVIAEPGRYFVEASHLL ARIYAKRSL L ++GA + G AYYI EGV GCFKDR+LCGVNFEPCPVS + HR XXXXXXXXXXXXXXXXXXXXXXXXX ++E AVVMGPSGLP DVVARKRLP SL PGDWLYFSQMGAYTASIATV SSAVLEAS CYVASTP A Sbjct: 1 MAMEPLTSAVKLLLDTQLDRAVDFTALSMLPNVADGGSTADVSSRRLPQVPVAGSKGWLPSMVEVGRQEARLRDTADESTGGDLGGGSTSSDVFFAVDLECVLHKYRRWHDCFPRVKPFYAVKCNPNSEVVRVLAATPGCGFDCASPAEMDQVLECGVDPSRIIYANPCKDLAALEHALSAGVATMTFDSKDELYKIRRLLDTRAKVSDGGLGESSVVQLVLRLRVPDSHSDCPLGEKYGAPEEACSELISLAVELRLPLVGISFHCGSGCQNAQAYPEALAVAKSVFDLAAQKGVMLTLLDIGGGFPGWDGSEYVYRRPSPDDGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXVKGGGEDVSDGCSLPCPPRXXXXXXXLSLAEIARVTLPVLDELFPPGSGVQVIAEPGRYFVEASHLLLARIYAKRSLAL---QVGADASSNAGXXXXXXXXXXXXXXXXXXXAYYIAEGVNGCFKDRVLCGVNFEPCPVS-SPPAGHRAPPGGAPQHGDDRAGQSAAPXXXXXXXXXXXXXXXXXXXXXXXXX-----ADEEHAVVMGPSGLPTDVVARKRLPSSLGPGDWLYFSQMGAYTASIATVASSAVLEASICYVASTPAAAA 632
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Match: A0A6H5JKK4_9PHAE (ODC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKK4_9PHAE) HSP 1 Score: 362 bits (930), Expect = 4.100e-109 Identity = 260/445 (58.43%), Postives = 274/445 (61.57%), Query Frame = 1 Query: 619 VQVVLRLRVPDSHSDCPLGEKYGAAEEACSELINLAVELRLSLVGISFHCGSGCQNAQAYPAALAVARSLFDLAARQGVKLTLLDIGGGFPGWDGSESVYQ-PMP------------RGEASAREERRGQATLGESTATSSTPSATVQSVFDVGTASTKDSGSDGSGGASGTRVAQADGATGGGEEGASTPPPP---------------LSLAEIARVTVPVLDELFPPGSGVQVIAEPGRYFVEASHLLFARIYAKRSLILASQELGASDQPDGGENESTRTERRKAKTTAYYIDEGVKGCFKDRLLCGVNFEPCPVSLAGGRRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDAVVMGPSGLPADVVARKRLPKSLKPGDWLYFSQMGAYTASIATVTSSAVLEASYCYVASTPDV 1869 VQ+VLRLRVPDSHSDCPLGEKYGAAEEACSELI+LAVELRL LVGISFHCGSGCQNAQAYP ALAVA+S+FDLA R+GVKLTLLDIGGGFPGWDGSE VY+ P P G D S + S P PP LSLAEIARVT+PVLD+LFPPGSGVQVIAEPGRYFVEASHLLFARIYAKRSL L +S+ AYYI EGV GCFKDR+LCGVNFEPCPVS XXXXXXXXXXXXXXXXXXXXXXXXX +EDAVVMGPSGLP DVVARKRLP SL PGDWLYFSQMGAYTASIATV SSAVLEAS+CYVASTP V Sbjct: 645 VQLVLRLRVPDSHSDCPLGEKYGAAEEACSELISLAVELRLPLVGISFHCGSGCQNAQAYPEALAVAKSVFDLADRKGVKLTLLDIGGGFPGWDGSEYVYRRPSPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDVS-------------------DECSLPCPPRPXXXXXXXXXXXXXLSLAEIARVTLPVLDKLFPPGSGVQVIAEPGRYFVEASHLLFARIYAKRSLSLLVGADASSNAGGDXXXXXXXXXXXXXXXXAYYIAEGVNGCFKDRVLCGVNFEPCPVSSPPAGH------GAPPRGAPQYEDHRAGQSAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDAVVMGPSGLPTDVVARKRLPLSLGPGDWLYFSQMGAYTASIATVASSAVLEASFCYVASTPAV 1064
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Match: A0A6H5L4L3_9PHAE (ODC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L3_9PHAE) HSP 1 Score: 282 bits (721), Expect = 6.270e-88 Identity = 139/198 (70.20%), Postives = 164/198 (82.83%), Query Frame = 1 Query: 28 LVLDTRVDGSVDFTALSVLPTLHD---SSEDNGRRISQVPVAGSRDWLSSMIEVGRQEV-----SDTAVGSGQRKMSTPSDAFFAVDLECVLHKYRIWHECFPRVKPFYAVKCNPNCEVVGVLAKTTGCGFDCASPAEMDQVLECGVNPSRVIYANPCKDVAALEHALDAGISTMTFDSKDELHKIRRLLDTRAKAKG 597 L+LDT++D +VDFTALS+LP + D +++ + RR+ +VPVAGS+DWL SM+EVGRQE +D + G S SD FFAVD+ECVLHKYR WH+CFPRVKPFYAVKCNPN EVV VLA T GCGFDCASPAEMDQVLECGV+PSR+IYANPCKD+AALEHAL AG++TMTFDSKDEL+KIRRLLD+RAKA G Sbjct: 12 LLLDTQLDRAVDFTALSMLPNVADGGSTADVSSRRLPRVPVAGSKDWLPSMVEVGRQEAHLRDTADESTGDDLDGGSASSDVFFAVDVECVLHKYRRWHDCFPRVKPFYAVKCNPNSEVVRVLAATPGCGFDCASPAEMDQVLECGVDPSRIIYANPCKDLAALEHALSAGVATMTFDSKDELYKIRRLLDSRAKALG 209
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Match: A0A7S2XQ74_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQ74_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.340e-59 Identity = 173/554 (31.23%), Postives = 242/554 (43.68%), Query Frame = 1 Query: 262 DLECVLHKYRIWHECFPRVKPFYAVKCNPNCEVVGVLAK-TTGCGFDCASPAEMDQVLECGV--NPSRVIYANPCKDVAALEHALDAGISTMTFDSKDELHKIRRLLDTRAKAKGPERGDANVQ--------VVLRLRVPDSHSDCPLGEKYGAAEEACSELINLAVELRLSLVGISFHCGSGCQNAQAYPAALAVARSLFD-----LAARQGVK------------LTLLDIGGGFPGWDGSESVYQPMPRGEASAREERRGQATLGESTATSSTPSATVQSVFDVGTASTKDSGSDGSGGASGTRVAQADGATGGGEEGASTPPPPLSLAEIARVTVPVLDELFPPGSG------VQVIAEPGRYFVEASHLLFARIYAKRSLILASQELGASDQPDGGENESTRTERRKAKTTAYYIDEGVKGCFKDRLLCGVNFEPCPVSLAGGRRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDAVVMGPSGLPADVVARKRLPKSLKPGDWLYFSQMGAYTASIATVTSS 1821 DL V+ K +W + FPR+KPF+AVKCNP+ V VL + GFDCAS +E+ L+ NP R IYANP + ++ LE AL+ G+ T+TFD +ELHK+RRL +TR + + E+ + + + +VLR+ VPD S PLGEK+GA + L A+ L L +VG+SFHCGSGC + AY A+ +A+ D + + Q TLLDIGGGFPG DG S T + D+ + A + + IA V P++D+LF +Q+I+EPGRYFVEA+ L +RIY+KR + + + + D G + S RR YYI +GV+G FKD LLCG +F P P+ + + + + GPSG DVV + L+ GDWL F +MGAYT SIA + S Sbjct: 2 DLSVVIRKLEVWRQLFPRIKPFFAVKCNPDKMVTAVLGQYILETGFDCASISEIKLALDSTTSSNPKRCIYANPQRAMSDLEKALELGVRTLTFDGLEELHKVRRLYETRCR-QWQEQDEQDTESARPLLPEMVLRIVVPDGASSVPLGEKFGAPPARVAALTEEALCLGLPVVGVSFHCGSGCHDPNAYGTAIQLAKEAMDTINSVILSHQHANPHKVDEPWLFRPCTLLDIGGGFPGIDGHGGDIGRF---------------------------SGTPHELTDMS------------------------------QHNAYAQNMENATSSIAAVVTPLVDQLFSVQEEDSNHQPIQIISEPGRYFVEAAFALCSRIYSKR---IGERVIIERSETDNGSSSSIF--RRH-----YYIAQGVQGVFKDVLLCGESFLPIPLHMQENHGNEKNPQHLDPNDATNNTLYP-------------------------------------STIHGPSGEDIDVVCVDCMLPELENGDWLLFDRMGAYTLSIAASSGS 450
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Match: A0A672HTC1_SALFA (Uncharacterized protein n=2 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HTC1_SALFA) HSP 1 Score: 215 bits (548), Expect = 2.140e-59 Identity = 141/400 (35.25%), Postives = 191/400 (47.75%), Query Frame = 1 Query: 244 DAFFAVDLECVLHKYRIWHECFPRVKPFYAVKCNPNCEVVGVLAKTTGCGFDCASPAEMDQVLECGVNPSRVIYANPCKDVAALEHALDAGISTMTFDSKDELHKIRRLLDTRAKAKGPERGDANVQVVLRLRVPDSHSDCPLGEKYGAAEEACSELINLAVELRLSLVGISFHCGSGCQNAQAYPAALAVARSLFDLAARQGVKLTLLDIGGGFPGWDGSESVYQPMPRGEASAREERRGQATLGESTATSSTPSATVQSVFDVGTASTKDSGSDGSGGASGTRVAQADGATGGGEEGASTPPPPLSLAEIARVTVPVLDELFPPGSGVQVIAEPGRYFVEASHLLFARIYAKRSLILASQELGASDQPDGGENESTRTERRKAKTTAYYIDEGVKGCF 1443 DAFF DL +L K+ W PRV PFYAVKCN + EVV LA + G GFDCAS E++ V GV+ SR+IYANPCK V+ +++A + G+ TMTFDS+ EL K+ +N ++VLR+ DS S C L K+GA+ +AC L+ A +L L+++G+SFH GSGC + A+ A+A AR +FDL A G + LLDIGGGFPG D E L EI V P LD+ FP SG+ +IAEPGRY+V +++ L I AK+ ++ E ASD+ D G + +T YYI++G+ G F Sbjct: 38 DAFFVCDLGDLLKKHLRWVRLLPRVTPFYAVKCNSSREVVATLA-SLGTGFDCASKVEIELVQSLGVDQSRIIYANPCKQVSQIKYASNHGVQTMTFDSEAELVKVANF-------------HSNAKLVLRIATDDSKSVCRLSMKFGASLKACRGLLERAKKLDLNVIGVSFHVGSGCTDPNAFTQAIADARYVFDLGAELGYNMDLLDIGGGFPGSDDVE------------------------------------------------------------------------------------LKFEEIVAVINPALDKYFPADSGINIIAEPGRYYVASAYTLVVNIIAKKVIV---DEDSASDEEDEGTAD---------RTLMYYINDGMYGSF 327
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Match: I3KU19_ORENI (Uncharacterized protein n=25 Tax=Percomorphaceae TaxID=1489872 RepID=I3KU19_ORENI) HSP 1 Score: 214 bits (544), Expect = 1.180e-58 Identity = 141/408 (34.56%), Postives = 192/408 (47.06%), Query Frame = 1 Query: 220 QRKMSTPSDAFFAVDLECVLHKYRIWHECFPRVKPFYAVKCNPNCEVVGVLAKTTGCGFDCASPAEMDQVLECGVNPSRVIYANPCKDVAALEHALDAGISTMTFDSKDELHKIRRLLDTRAKAKGPERGDANVQVVLRLRVPDSHSDCPLGEKYGAAEEACSELINLAVELRLSLVGISFHCGSGCQNAQAYPAALAVARSLFDLAARQGVKLTLLDIGGGFPGWDGSESVYQPMPRGEASAREERRGQATLGESTATSSTPSATVQSVFDVGTASTKDSGSDGSGGASGTRVAQADGATGGGEEGASTPPPPLSLAEIARVTVPVLDELFPPGSGVQVIAEPGRYFVEASHLLFARIYAKRSLILASQELGASDQPDGGENESTRTERRKAKTTAYYIDEGVKGCF 1443 + M+ DAF+ DL V+ K+ W PRV+PFYAVKCN + VV LA T G GFDCAS E+ V GV+PSR+IYANPCK V+ +++A G+ MTFDS+ EL K+ R D N ++VLR+ DS + C L K+GA +AC L+ A EL L ++G+SFH GSGC + + Y A+A AR +FD A G + LLDIGGGFPG D +E L EI V P LD+ FP GV +IAEPGR++V +++ L I AK+ ++ +E ASD+ D G ++ +T YY+++GV G F Sbjct: 46 ESSMTDDRDAFYVCDLGDVVKKHLRWARALPRVRPFYAVKCNDSRAVVMTLA-TLGTGFDCASKTEIQLVQSLGVDPSRIIYANPCKQVSQIKYASAHGVQMMTFDSEVELMKVARCHD-------------NAKLVLRIATDDSKAVCRLSVKFGAPLKACRGLLERAKELGLDVIGVSFHVGSGCTDPETYTQAIADARCVFDTGAELGFNMDLLDIGGGFPGSDNTE------------------------------------------------------------------------------------LKFEEITGVINPALDKYFPVDCGVNIIAEPGRFYVASAYTLVVNIIAKK--VIMDEEF-ASDEEDEGTSD---------RTLMYYVNDGVYGSF 343
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Match: UPI0015AA4382 (ornithine decarboxylase-like n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AA4382) HSP 1 Score: 213 bits (542), Expect = 1.590e-58 Identity = 143/417 (34.29%), Postives = 192/417 (46.04%), Query Frame = 1 Query: 229 MSTPSDAFFAVDLECVLHKYRIWHECFPRVKPFYAVKCNPNCEVVGVLAKTTGCGFDCASPAEMDQVLECGVNPSRVIYANPCKDVAALEHALDAGISTMTFDSKDELHKIRRLLDTRAKAKGPERGDANVQVVLRLRVPDSHSDCPLGEKYGAAEEACSELINLAVELRLSLVGISFHCGSGCQNAQAYPAALAVARSLFDLAARQGVKLTLLDIGGGFPGWDGSESVYQPMPRGEASAREERRGQATLGESTATSSTPSATVQSVFDVGTASTKDSGSDGSGGASGTRVAQADGATGGGEEGASTPPPPLSLAEIARVTVPVLDELFPPGSGVQVIAEPGRYFVEASHLLFARIYAKRSLILASQELGASDQPDGGENESTRTERRKAKTTAYYIDEGVKGCFKDRLLCGVNFEP 1479 MS DAF+ DL VL K+ W PRV PFYAVKCN + VV LA T G GFDCAS E+ QV GV+PSR+IYANPCK V+ +++A G+ MTFDS+ EL K+ R + N ++VLR+ DS + + K+GA E+ L+ A EL L ++G+SFH GSGC + + Y A++ AR +FD+ G +TLLDIGGGFPG D S+ ++ E V P LD+ FP S VQVIAEPGRY+V +++ L I AK+ ++ ++L + DG N +T YY++EGV G F D L V P Sbjct: 33 MSDDKDAFYVADLGEVLKKHLRWVRALPRVTPFYAVKCNDSRTVVMTLA-TLGTGFDCASKNEIQQVQSLGVDPSRIIYANPCKQVSHIKYASAHGVQMMTFDSEVELTKVARYHE-------------NAKLVLRIATDDSMAVFQMSNKFGATLESSRLLLERARELGLDIIGVSFHVGSGCTDPETYSQAISDARCVFDMGVELGYNMTLLDIGGGFPGSDDSDQKFE------------------------------------------------------------------------------------EFTAVINPALDKYFPANSEVQVIAEPGRYYVTSAYTLAVNIIAKK--VVMKEQLACDYENDGANN----------RTLMYYVNEGVYGSFFDVLFQHVLASP 339
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Match: A0A6P4ZCC1_BRABE (ornithine decarboxylase-like n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZCC1_BRABE) HSP 1 Score: 213 bits (541), Expect = 3.390e-58 Identity = 139/419 (33.17%), Postives = 193/419 (46.06%), Query Frame = 1 Query: 187 QEVSDTAVGSGQRKMSTPSDAFFAVDLECVLHKYRIWHECFPRVKPFYAVKCNPNCEVVGVLAKTTGCGFDCASPAEMDQVLECGVNPSRVIYANPCKDVAALEHALDAGISTMTFDSKDELHKIRRLLDTRAKAKGPERGDANVQVVLRLRVPDSHSDCPLGEKYGAAEEACSELINLAVELRLSLVGISFHCGSGCQNAQAYPAALAVARSLFDLAARQGVKLTLLDIGGGFPGWDGSESVYQPMPRGEASAREERRGQATLGESTATSSTPSATVQSVFDVGTASTKDSGSDGSGGASGTRVAQADGATGGGEEGASTPPPPLSLAEIARVTVPVLDELFPPGSGVQVIAEPGRYFVEASHLLFARIYAKRSLILASQELGASDQPDGGENESTRTERRKAKTTAYYIDEGVKGCF 1443 Q+V V SG R DAFF DL +++KY+ W C PRV PFYAVKCN + V+ VLA G GFDCAS E+ VL GV+P R++YANPCK + + +A G+ MTFD++DELHKI+ + ++LR+ P + + C LG K+G +L+ +A +L L++VG+SFH GSGC A A+ + A+ +F++A + G + LDIGGGFPG +E A+ +S EI P LDE FPPGSGV++IAEPGRYFV ++ + I AKR + QE + D N S + YY+++GV G F Sbjct: 22 QDVLANKVNSGGR--DDKDDAFFVCDLGDIVNKYKKWVSCLPRVVPFYAVKCNDSPHVLQVLANL-GTGFDCASKTEVQAVLNLGVSPDRIVYANPCKQTSHIRYAKKNGVDLMTFDNEDELHKIKNYFP-------------DASLLLRILPPAAEAQCQLGMKFGCHPSQAPKLLEVAAQLDLNVVGVSFHVGSGCLEASAFARGVESAKRIFNIADQYGFEFNTLDIGGGFPG-------------------------------------------------------------------------------QESAA-----ISFDEIVADLGPALDEHFPPGSGVRIIAEPGRYFVASAFTVAVNIVAKRMVARDIQEFKDEEAEDAVMN-SVAPSMCEEPAFMYYVNDGVYGSF 339
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Match: UPI00195584A7 (ornithine decarboxylase-like n=2 Tax=Pimephales promelas TaxID=90988 RepID=UPI00195584A7) HSP 1 Score: 209 bits (533), Expect = 3.030e-57 Identity = 136/405 (33.58%), Postives = 192/405 (47.41%), Query Frame = 1 Query: 229 MSTPSDAFFAVDLECVLHKYRIWHECFPRVKPFYAVKCNPNCEVVGVLAKTTGCGFDCASPAEMDQVLECGVNPSRVIYANPCKDVAALEHALDAGISTMTFDSKDELHKIRRLLDTRAKAKGPERGDANVQVVLRLRVPDSHSDCPLGEKYGAAEEACSELINLAVELRLSLVGISFHCGSGCQNAQAYPAALAVARSLFDLAARQGVKLTLLDIGGGFPGWDGSESVYQPMPRGEASAREERRGQATLGESTATSSTPSATVQSVFDVGTASTKDSGSDGSGGASGTRVAQADGATGGGEEGASTPPPPLSLAEIARVTVPVLDELFPPGSGVQVIAEPGRYFVEASHLLFARIYAKRSLILASQELGASDQPDGGENESTRTERRKAKTTAYYIDEGVKGCF 1443 +S DAF+ DL VL K+ W PR+ PFYAVKCN + VV LA G GFDCAS E+ V GV+ SR+IYANPCK V+ +++A D G+ MTFDS EL K+ R D+ ++VLR+ DS + C L K+GA ++ L+ A EL L ++G+SFH GSGC + ++Y AL+ AR +FD+ G +TL+DIGGGFPG D ++ ++ E A V P LD+ FP SGV++I+EPGR++VE+++ L I AK+ ++ +E ASD+ D NE +T YY+++GV G F Sbjct: 33 LSDDKDAFYVADLGDVLKKHLRWFRVLPRITPFYAVKCNDSGAVVSTLAYL-GAGFDCASKTEIQLVQSVGVDSSRIIYANPCKQVSQIKYASDHGVQMMTFDSDVELMKVSRYHDS-------------AKLVLRIATDDSKAVCRLSVKFGATLKSSRLLLERAKELGLDVIGVSFHVGSGCTDPESYRQALSDARCVFDMGVELGYNMTLIDIGGGFPGLDDTKPKFE------------------------------------------------------------------------------------EFAAVINPALDKYFPADSGVRIISEPGRFYVESAYTLAVNIIAKKVIM---KEQSASDEEDDMTNE---------RTLMYYVNDGVYGSF 327
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Match: UPI0012450377 (type III PLP-dependent enzyme n=4 Tax=Acinetobacter baumannii TaxID=470 RepID=UPI0012450377) HSP 1 Score: 209 bits (531), Expect = 4.190e-57 Identity = 133/417 (31.89%), Postives = 194/417 (46.52%), Query Frame = 1 Query: 244 DAFFAVDLECVLHKYRIWHECFPRVKPFYAVKCNPNCEVVGVLAKTTGCGFDCASPAEMDQVLECGVNPSRVIYANPCKDVAALEHALDAGISTMTFDSKDELHKIRRLLDTRAKAKGPERGDANVQVVLRLRVPDSHSDCPLGEKYGAAEEACSELINLAVELRLSLVGISFHCGSGCQNAQAYPAALAVARSLFDLAARQGVKLTLLDIGGGFPGWDGSESVYQPMPRGEASAREERRGQATLGESTATSSTPSATVQSVFDVGTASTKDSGSDGSGGASGTRVAQADGATGGGEEGASTPPPPLSLAEIARVTVPVLDELFPPGSGVQVIAEPGRYFVEASHLLFARIYAKRSLILASQELGASDQPDGGENESTRTERRKAKTTAYYIDEGVKGCFKDRLLCGVNFEPCPVSL 1494 D FF VDL + HKY++W PR+ PFYA+KCN V+ LA + G FDCAS E++ V++ GV+PSR+IYANPCK + +++A G+ MTFD++ EL+KI+ + N ++++R++V DS+S L K+G + + L+ A L L+++G+SFH GSGCQ++ AYP A+A ++ +FD+A G LLDIGGGFPG S+ ++ EIA VT LD FP G GVQ+IAEPGRYFV ++ L I AKR ++ + + D+P YY+++GV G F L + P P+ L Sbjct: 31 DPFFIVDLTDIEHKYKLWKLKMPRITPFYAMKCNDCPGVLQYLA-SIGVNFDCASKTEIETVIKLGVDPSRIIYANPCKTRSFIKYAATVGVKMMTFDNEIELYKIKSIFP-------------NAELIIRIKVDDSNSHFKLSLKFGCEMQQVAHLLKTAKSLDLNVIGVSFHVGSGCQSSSAYPKAIADSKEVFDIAKEIGYDFYLLDIGGGFPGLKTSQKYFE------------------------------------------------------------------------------------EIAAVTTATLDMYFPEGCGVQIIAEPGRYFVASAFTLCVNIIAKREMMTSGKN---GDEP----------------ACMYYLNDGVYGSFNCVLYEPTDLNPYPLLL 330 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17081.1 >prot_C-linearis_contig97.17081.1 ID=prot_C-linearis_contig97.17081.1|Name=mRNA_C-linearis_contig97.17081.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=637bp MDQEPLFLPLVLDTRVDGSVDFTALSVLPTLHDSSEDNGRRISQVPVAGSback to top mRNA from alignment at C-linearis_contig97:258993..265144- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig97.17081.1 ID=mRNA_C-linearis_contig97.17081.1|Name=mRNA_C-linearis_contig97.17081.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6152bp|location=Sequence derived from alignment at C-linearis_contig97:258993..265144- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig97:258993..265144- >mRNA_C-linearis_contig97.17081.1 ID=mRNA_C-linearis_contig97.17081.1|Name=mRNA_C-linearis_contig97.17081.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3822bp|location=Sequence derived from alignment at C-linearis_contig97:258993..265144- (Chordaria linearis ClinC8C monoicous)back to top |