Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 336 |
| Cds size | 336 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930827.8458264-CDS-C-linearis_contig97:238580..238765 | 1622930827.8458264-CDS-C-linearis_contig97:238580..238765 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 238581..238765 - |
| 1690881270.6437738-CDS-C-linearis_contig97:238580..238765 | 1690881270.6437738-CDS-C-linearis_contig97:238580..238765 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 238581..238765 - |
| 1622930827.8723447-CDS-C-linearis_contig97:239329..239444 | 1622930827.8723447-CDS-C-linearis_contig97:239329..239444 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 239330..239444 - |
| 1690881270.6562855-CDS-C-linearis_contig97:239329..239444 | 1690881270.6562855-CDS-C-linearis_contig97:239329..239444 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 239330..239444 - |
| 1622930827.8922765-CDS-C-linearis_contig97:240273..240309 | 1622930827.8922765-CDS-C-linearis_contig97:240273..240309 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 240274..240309 - |
| 1690881270.6681137-CDS-C-linearis_contig97:240273..240309 | 1690881270.6681137-CDS-C-linearis_contig97:240273..240309 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 240274..240309 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17078.1 >prot_C-linearis_contig97.17078.1 ID=prot_C-linearis_contig97.17078.1|Name=mRNA_C-linearis_contig97.17078.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=112bp
KTIRLHNLAASSDSAETVAHKLGRKFPRHLGQQVVKHAQLQGLIFKLQCL
VSQRRSRSDASGRPESAAAADQIHCQDQGHEQDHQDQDGGGDEDGGDLNL
ASENELVAAKMR back to topmRNA from alignment at C-linearis_contig97:238581..240309- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig97.17078.1 ID=mRNA_C-linearis_contig97.17078.1|Name=mRNA_C-linearis_contig97.17078.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1729bp|location=Sequence derived from alignment at C-linearis_contig97:238581..240309- (Chordaria linearis ClinC8C monoicous)
AAAACGATAAGACTGCACAACCTCGCCGCCTCTTCGGTAAGACACTGCTT
GTACACAACGCTAATAGGCTATTAGTCTATGACATTTCCATGACATCGAG
TCTAGTCTTGGTAGTCTACACATGTGTGCGCTGTGCATGCAAGCCACCAG
TGCTGGTTGTTTGGTGAGGAGCTAGGTAGTACATGGCTCCAATAGCACAC
GTATTGCAGGGTGATCGTTGACAAAGGCACACTCACGTTTATTAGCACTA
GTAGGACGCAGGGCAAGAGAGAGGGGGGAGGATTGCCAACCGCGATCCTC
CGTGGCTCTTTGCTACTGAGACTCTGCTGTTCTACTGCTGTATCTATGAC
TGATCTTCTGATTGCCATAGTCTAATAAAAAAGTAATCAGTTTATGACCT
AACCTCTCCAAGTACATGCATATTAGTTATGTAAGTCTCACATCGCTATT
ATACCCAACGGGTGTATCCTAACTCTGTATTACCGTAACACAGAGTTGCA
AATCACCGGCGAAAAATGACGATCTTACCAGCGGGCCGGTGCTGCCAAGC
ATAGACTATGTTTTACGTAGACCAGAGCCCCCGCCCCCGTATTGTGCAAG
CTTCTCAATCGCAAGCAAAAGCTTTCCGAAATCACATTGAACATACACTA
GATGGTCAGTCTCCACCAGACCTCGCACCTTTTCCCGTTCGCTACTCCTG
ACTGAAAAGTACTACATGTATGTACTGCTGCTGTCCACGATAAAATGTAG
CCAGCCATCAGAACGTGTCGTTAATTGTCGTTGTAAACCACGTATGCATG
TGTAGACTAATAATCGTCTGTCATCCAACGCCGGTTGTCCAACCCCTTTC
CTCTTGTCTTGGGAGGATTCTGCCGAGACTGTGGCGCACAAACTAGGCCG
CAAGTTTCCTCGCCATCTCGGCCAACAGGTGGTGAAGCACGCTCAGCTAC
AGGGACTTATTTTCAAGCTGCAATGCCTCGGTTAGTCAACGTTTCATTTG
TTTCGTGTAGCCTACAGTAAGTACAGCAGTTGTAGTCCGCAGCCATCTAG
ATACGGAAAACGACGATAGACCTATTATTGTATGTAGTCGACTTTCGTTA
TGAGCGCGTGTTGACTAGACTTTGCGTTCATCAGCGGCTCGTATTCGACC
GTCATCTCCGAAAGGTTGACCCCGGCGGCGGGGTCTGTTTCAATCTGGCA
CCGAAAATAATGCACAGACCTCCTTCCTCGCGGCCATCTCGACGAACGCT
ATGGACATAGAGCAAATAACCTCTGTTTGAAGATAAGAAAAATCGTCCCC
TCCGAGCCCCAACTCCCCGCGGCGGACATTGCTCTATCGGACTGGGGGGC
GGGAACAACTGAAGGAAATAATAGGCAAATTAGGCAAGCTCCCGGAGATA
CCGGAGAAAACGAGAGTTTCGCCGTCGTCGTTATTGGCCAGGATACAAAC
GAATTGTTGTCGTATTCACAGTAGCAGTGCAACAGGAATGCCCCCCCCGG
GTGGTAGTAAACATTCTTGCAACTTCACGGTGTCCCTCTGGCAGTGTCCC
AAAGAAGATCAAGGTCAGATGCCTCTGGTCGGCCGGAAAGCGCTGCCGCA
GCAGATCAAATACATTGTCAAGACCAAGGACACGAACAAGACCACCAAGA
CCAAGATGGAGGTGGAGATGAAGACGGAGGCGACTTAAACCTTGCGTCGG
AGAACGAGCTAGTTGCCGCCAAGATGCGC back to topCoding sequence (CDS) from alignment at C-linearis_contig97:238581..240309- >mRNA_C-linearis_contig97.17078.1 ID=mRNA_C-linearis_contig97.17078.1|Name=mRNA_C-linearis_contig97.17078.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at C-linearis_contig97:238581..240309- (Chordaria linearis ClinC8C monoicous)
AAAACGATAAGACTGCACAACCTCGCCGCCTCTTCGAAAACGATAAGACT
GCACAACCTCGCCGCCTCTTCGGATTCTGCCGAGACTGTGGCGCACAAAC
TAGGCCGCAAGTTTCCTCGCCATCTCGGCCAACAGGTGGTGAAGCACGCT
CAGCTACAGGGACTTATTTTCAAGCTGCAATGCCTCGGATTCTGCCGAGA
CTGTGGCGCACAAACTAGGCCGCAAGTTTCCTCGCCATCTCGGCCAACAG
GTGGTGAAGCACGCTCAGCTACAGGGACTTATTTTCAAGCTGCAATGCCT
CGTGTCCCAAAGAAGATCAAGGTCAGATGCCTCTGGTCGGCCGGAAAGCG
CTGCCGCAGCAGATCAAATACATTGTCAAGACCAAGGACACGAACAAGAC
CACCAAGACCAAGATGGAGGTGGAGATGAAGACGGAGGCGACTTAAACCT
TGCGTCGGAGAACGAGCTAGTTGCCGCCAAGATGCGCTGTCCCAAAGAAG
ATCAAGGTCAGATGCCTCTGGTCGGCCGGAAAGCGCTGCCGCAGCAGATC
AAATACATTGTCAAGACCAAGGACACGAACAAGACCACCAAGACCAAGAT
GGAGGTGGAGATGAAGACGGAGGCGACTTAAACCTTGCGTCGGAGAACGA
GCTAGTTGCCGCCAAGATGCGC back to top
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