mRNA_C-linearis_contig97.17071.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Match: A0A6H5JHB6_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB6_9PHAE) HSP 1 Score: 629 bits (1621), Expect = 1.130e-220 Identity = 337/436 (77.29%), Postives = 361/436 (82.80%), Query Frame = 2 Query: 110 CQFLLSPTSPRTSNQQXXXXXDRGTSPAARHRVRAGAGQHPAGTYRIRHVEGACRSFSSSSTSSFEEDCEAIEECNLLLSSRLDIPALEARLKELDALVSDPKLYDDSVTAGKVVKERAKVESKLEAVKGLTSELQTWREMHEMASLEDEEELLAECIEKVTALRKQAERARAETLLSLGGKLSSSNCYLELQAGAGGTESHDWTNMLFKMYTRWAESRGFTLRPLNSSAGDEAGLRSVMVFVEGDSAYGWLRSEAGVHRLVRNSPYDPTGRRHTSFSQVRVFPEAGAGSGGANAVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERQAKRNEYASGLGDNAFGNQIRSYVLTPYQMVKDHRTGKQEGDVFAVLGGELDAFIDAALTAEHSKGAAQ 1417 C L++P QQ T P R R G + P + EG S S+FEEDC+ IEEC+LLLSSRLDIPALEARL ELDALVSDPKLYDDS AGK+VKERAKVESKLE VK L SE+++WREM+EMASLE+E +LL ECIEKV ALRKQAERARA+TLLSLGG+LS SNCYLELQAGAGGTESHDWT+ML+KMYTRWAE++ FTLRPLNSS GDEAGLRSVMVFVEG+SAYGWLRSEAGVHRLVRNSPYDP GRRHTSFSQVRVFPEAG SG A VEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEER AKRNEYA+GLGDNAFGNQIRSYVL+PYQMVKDHRTGKQEGDV VL FIDAAL AEHSKG + Sbjct: 39 CTCLVTPQR----RQQSHLRAAAATQPNGRGRAIPGRTRPPGAPF-----EGVIGGCSRRLISTFEEDCKVIEECHLLLSSRLDIPALEARLAELDALVSDPKLYDDSTKAGKIVKERAKVESKLENVKSLNSEVKSWREMYEMASLEEEGDLLTECIEKVGALRKQAERARADTLLSLGGELSFSNCYLELQAGAGGTESHDWTSMLYKMYTRWAETKAFTLRPLNSSPGDEAGLRSVMVFVEGESAYGWLRSEAGVHRLVRNSPYDPNGRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDXXXXXFIDAALIAEHSKGGEE 465
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Match: H3GA21_PHYRM (RF_PROK_I domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA21_PHYRM) HSP 1 Score: 347 bits (890), Expect = 2.640e-111 Identity = 180/341 (52.79%), Postives = 242/341 (70.97%), Query Frame = 2 Query: 365 PALEARLKELDALVSDPKLYDDSVTAGKVVKERAKVESKLEAVKGLTSELQTWREMHEMASLEDEEELLAECIEKVTALRKQAERARAETLLSLGGKLSSSNCYLELQAGAGGTESHDWTNMLFKMYTRWAESRGFTLRPLNSSAGDEAGLRSVMVFVEGDSAYGWLRSEAGVHRLVRNSPYDPTGRRHTSFSQVRVFPEAGAGSGGANAVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERQAKRNEYASGLGDNAFGNQIRSYVLTPYQMVKDHRTGKQEGDVFAVLGGELDAFIDAAL 1387 P+LE L EL +DP L+DD+ TA VV+ A +ES+ L +E++ MA+ E +E ++ +C+ +TA+R A++ R E LLS + + +C+LE+QAGAGGT+S DWT ML +MY RW E+RGF ++ ++ S GDEAG RSV++ ++G AYGW +SEAGVHRLVR SP+D GRRHTSF+QVRV+P A G +EIP KDL++DT R+ G GGQHVN+TDSA+R+THLPTG+V SQSDRSQH+N+ A+ LRAK++QR+ EE KR ++A GLGDNA+GNQIRSYVL PYQMVKDHRT E + VL G++D F++ L Sbjct: 44 PSLE--LTELREEAADPNLWDDATTAASVVQRLAALESRETRAHELQRRFLDTKELYVMATEESDEPMIRDCVNAMTAVRTGAQQLRLELLLSH--ESDARSCFLEIQAGAGGTDSCDWTAMLARMYARWGEARGFQVQHVDESVGDEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMASEGRS-KEEIEIPTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKAEALAMLRAKLYQRKLEEEALKRQQFAQGLGDNAWGNQIRSYVLHPYQMVKDHRTNYSETNTAQVLDGDIDQFVEKML 379
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Match: D0NMN6_PHYIT (Peptide chain release factor, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMN6_PHYIT) HSP 1 Score: 342 bits (878), Expect = 1.020e-109 Identity = 175/335 (52.24%), Postives = 240/335 (71.64%), Query Frame = 2 Query: 383 LKELDALVSDPKLYDDSVTAGKVVKERAKVESKLEAVKGLTSELQTWREMHEMASLEDEEELLAECIEKVTALRKQAERARAETLLSLGGKLSSSNCYLELQAGAGGTESHDWTNMLFKMYTRWAESRGFTLRPLNSSAGDEAGLRSVMVFVEGDSAYGWLRSEAGVHRLVRNSPYDPTGRRHTSFSQVRVFPEAGAGSGGANAVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERQAKRNEYASGLGDNAFGNQIRSYVLTPYQMVKDHRTGKQEGDVFAVLGGELDAFIDAAL 1387 L EL +DPKL+DD+ A VV+ A +ES+ V L + +E++ +A E++E +L +C+ +T +R +A++ R E LLS + + +C+LE+QAGAGGT+S DWT ML +MY RW+E RGF ++ ++ S GDEAG RSV++ ++G AYGW ++EAGVHRLVR SP+D GRRHTSF+QVRV+P A G A +E+ KDL++DT R+ G GGQHVN+TDSA+R+THL TG+V SQSDRSQH+N+ AM LRAK++QR+ EE R ++A GLGDNA+GNQIRSYVL PYQ+VKDHRT EG++ VL G++D FI+ L Sbjct: 34 LAELRQEAADPKLWDDASNAASVVQRLAALESRETRVHELHRQFLDTKELYVLAKEEEDESMLGDCVSAMTVVRAEAQQLRLEFLLSH--ETDAHSCFLEIQAGAGGTDSCDWTAMLARMYARWSEMRGFQVQYVDESVGDEAGFRSVVLKLDGVYAYGWAKNEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAEGRSSAE-IEVSTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLRTGIVVQSQSDRSQHRNKAEAMAMLRAKLYQRKLEEEAKARQKFAQGLGDNAWGNQIRSYVLHPYQLVKDHRTNYSEGNIAQVLDGDIDRFIEKML 365
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Match: A0A662WW55_9STRA (RF_PROK_I domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW55_9STRA) HSP 1 Score: 343 bits (880), Expect = 7.920e-109 Identity = 187/388 (48.20%), Postives = 258/388 (66.49%), Query Frame = 2 Query: 263 GACRSFSS----SSTSSFEEDCEAIEECNLLLSSRLDIPALEARLKELDALVSDPKLYDDSVTAGKVVKERAKVESKLEAVKGLTSELQTWREMHEMASLEDEEELLAECIEKVTALRKQAERARAETLLSLGGKLSSSNCYLELQAGAGGTESHDWTNMLFKMYTRWAESRGFTLRPLNSSAGDEAGLRSVMVFVEGDSAYGWLRSEAGVHRLVRNSPYDPTGRRHTSFSQVRVFPEAGAGSGGANAVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERQAKRNEYASGLGDNAFGNQIRSYVLTPYQMVKDHRTGKQEGDVFAVLGGELDAFIDAALTAEHSKGAA 1414 GA R FSS S+ SF E + ++ + + L +L ++P L+DD+ A VV++ A +E++ + L +E++ +A+ E +E LL +C + +R A++ R E LLS + + +C+LE+QAGAGGT+S DWT ML +MY RW E+RGF ++ + SAGDEAG RSV++ ++G AYGW +SEAGVHRLVR SP+D GRRHTSF+QVRV+P A G G VE+PAKDL+VDT R+ G GGQHVN+TDSA+R+THLP+G+V SQSDRSQH+N+ A+ LRAK++QRE +E+ R+ +A GLGDNA+GNQIRSYVL PYQ+VKDHRT EG+ VL G +D FI+ L + + AA Sbjct: 65 GAVRLFSSHDAPSNAESFAASSEQAKREIAVIHDVVTAAHAKEALAKLRVQAAEPNLWDDATRAASVVQQLAALEAREAQARELQRRFLDTKELYALAAEEADEPLLRDCEAAMVQVRVDAQQLRLELLLSH--ESDARSCFLEIQAGAGGTDSCDWTAMLARMYARWGEARGFQVQHADESAGDEAGFRSVVLRLDGAFAYGWAKSEAGVHRLVRVSPFDSAGRRHTSFAQVRVYPMASEGGGSRQDVELPAKDLRVDTFRSSGPGGQHVNSTDSAIRITHLPSGIVVQSQSDRSQHRNKAEALAMLRAKLYQRELDEQARARHAFAQGLGDNAWGNQIRSYVLHPYQLVKDHRTNYAEGNTKLVLDGGIDRFIEEMLLHQAAVDAA 450
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Match: W2QJH8_PHYPN (Peptide chain release factor 2 n=9 Tax=Phytophthora TaxID=4783 RepID=W2QJH8_PHYPN) HSP 1 Score: 340 bits (873), Expect = 4.880e-108 Identity = 174/335 (51.94%), Postives = 240/335 (71.64%), Query Frame = 2 Query: 383 LKELDALVSDPKLYDDSVTAGKVVKERAKVESKLEAVKGLTSELQTWREMHEMASLEDEEELLAECIEKVTALRKQAERARAETLLSLGGKLSSSNCYLELQAGAGGTESHDWTNMLFKMYTRWAESRGFTLRPLNSSAGDEAGLRSVMVFVEGDSAYGWLRSEAGVHRLVRNSPYDPTGRRHTSFSQVRVFPEAGAGSGGANAVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERQAKRNEYASGLGDNAFGNQIRSYVLTPYQMVKDHRTGKQEGDVFAVLGGELDAFIDAAL 1387 L EL +DP L+DD+ A VV+ A +ES+ L + +E++ +A E++E +L +C+ +TA+R +A++ R E LL+ + + +C++E+QAGAGGT+S DWT ML +MY RW E+RGF ++ ++ SAG+EAG RSV++ ++G AYGW +SEAGVHRLVR SP+D GRRHTSF+QVRV+P A G A +E+ KDL++DT R+ G GGQHVN+TDSA+R+THLPTG+V SQSDRSQH+N+ AM LRAK++QR+ EE R ++A GLGDNA+GNQIRSYVL PYQ+VKDHRT EG+ VL G++D FI+ L Sbjct: 103 LAELRQEAADPDLWDDASNAASVVQRLATLESRETRTHELHRQFLDTKELYMLAKDEEDESMLRDCVSAMTAVRAEAQQLRLELLLAH--ESDTRSCFVEIQAGAGGTDSCDWTAMLARMYARWGEARGFQVQFVDESAGEEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAEGRSSAE-IEVSNKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKAEAMAILRAKLYQRKLEEEARARQQFAQGLGDNAWGNQIRSYVLHPYQLVKDHRTNYSEGNTAQVLDGDIDQFIEKML 434
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Match: A0A8K1CGR1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGR1_PYTOL) HSP 1 Score: 339 bits (869), Expect = 6.820e-108 Identity = 186/383 (48.56%), Postives = 252/383 (65.80%), Query Frame = 2 Query: 245 RIRHVEGACRSFSSSSTSSFEEDCEAIEECNLLLSSRLDIPALEARLKELDALVSDPKLYDDSVTAGKVVKERAKVESKLEAVKGLTSELQTWREMHEMASLEDEEELLAECIEKVTALRKQAERARAETLLSLGGKLSSSNCYLELQAGAGGTESHDWTNMLFKMYTRWAESRGFTLRPLNSSAGDEAGLRSVMVFVEGDSAYGWLRSEAGVHRLVRNSPYDPTGRRHTSFSQVRVFPEAGAGSGGA--NAVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERQAKRNEYASGLGDNAFGNQIRSYVLTPYQMVKDHRTGKQEGDVFAVLGGELDAFIDAAL 1387 R+RHV S SF E E ++ ++ S + + +LKEL L+DD A +V+++ +ES+ V L + + M+ +AS EDE+ L+ EC+ ++T L Q + R E +LS + S+C++E+QAGAGGTES DW ML +MY+RWA++R F + + S G+EAG RSV + V+G AYGW ++EAGVHRLVR SP+D GRRHTSF+QVRV+P A GG +A+EIP KDL++DT R+ GAGGQHVNTTDSAVR+THLPTG+V QSDRSQH+N+ AM L+AK++QRE E++ + +Y GLG+NA+GNQIRSYVL PY+MVKDHRT D AVL GELD F++ L Sbjct: 30 RVRHVH-------SEPDESFSERAERVKHELSIVHSVVMTAHVHDQLKELREQAQRSDLWDDPTHAAQVLQQLGALESRETRVSDLRTRFLDAKAMYVLASEEDEQSLMDECMTQMTTLLDQVKTLRVELMLS--SESDRSSCFIEIQAGAGGTESCDWVAMLARMYSRWADARSFKTQYADESPGEEAGFRSVCLRVDGAYAYGWAKTEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAMAGGGQGKHAIEIPTKDLRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSDRSQHRNKAEAMEMLQAKLYQRELEQQMQAKQQYTQGLGENAWGNQIRSYVLHPYKMVKDHRTNFSLTDTRAVLDGELDRFMEEML 403
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Match: A0A421GPH8_9STRA (RF_PROK_I domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GPH8_9STRA) HSP 1 Score: 335 bits (858), Expect = 4.770e-107 Identity = 176/346 (50.87%), Postives = 239/346 (69.08%), Query Frame = 2 Query: 383 LKELDALVSDPKLYDDSVTAGKVVKERAKVESKLEAVKGLTSELQTWREMHEMASLEDEEELLAECIEKVTALRKQAERARAETLLSLGGKLSSSNCYLELQAGAGGTESHDWTNMLFKMYTRWAESRGFTLRPLNSSAGDEAGLRSVMVFVEGDSAYGWLRSEAGVHRLVRNSPYDPTGRRHTSFSQVRVFPEAGAGSGGANAVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERQAKRNEYASGLGDNAFGNQIRSYVLTPYQMVKDHRTGKQEGDVFAVLGGELDAFIDAAL---TAEHSKGA 1411 L EL + P L+DD+ A +V++ A +ES+ L + +E+ +A+ E ++ +L +C + +R A++ R E LLS + + +C+LE+QAGAGGT+S DWT ML +MY RWAE RGF + ++ S GDEAG RSV++ ++G AYGW +SEAGVHRLVR SP+D GRRHTSF+QVRV+P A G G +EI KDL++DT R+ G GGQHVNTTDSA+R+THLPTG+V SQSDRSQH+N+ A+ LRAK++QRE E++ KR ++ GLGDNA+G+QIRSYVL PYQMVKDHRT E + VL G++D FI+ L TA +S G+ Sbjct: 9 LAELRKEAAKPNLWDDATRAASIVQQLAALESREARAHELQRQFLDTKELFVLATEEGDDSVLRDCKSSMVTVRADAQQLRLELLLSH--ESDARSCFLEIQAGAGGTDSCDWTAMLARMYGRWAEGRGFQVHNVDESVGDEAGFRSVVLRLDGAYAYGWTKSEAGVHRLVRISPFDTAGRRHTSFAQVRVYPMAPEG-GSKQEIEISTKDLRIDTFRSSGPGGQHVNTTDSAIRITHLPTGIVVQSQSDRSQHRNKAEALAMLRAKLYQRELEDQARKRQQFTQGLGDNAWGSQIRSYVLHPYQMVKDHRTNYSESNTALVLDGDIDQFIEKMLLQQTASNSDGS 351
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Match: A0A140ECK2_9STRA (Mitochondrial peptide chain release factor 2 n=1 Tax=Vischeria sp. CAUP Q 202 TaxID=1805947 RepID=A0A140ECK2_9STRA) HSP 1 Score: 337 bits (864), Expect = 2.070e-106 Identity = 176/368 (47.83%), Postives = 248/368 (67.39%), Query Frame = 2 Query: 290 STSSFEEDCEAIEECNLLLSSRLDIPALEARLKELDALVSDPKLYDDSVTAGKVVKERAKVESKLEAVKGLTSELQTWREMHEMASLEDEEELLAECIEKVTALRKQAERARAETLLSLGGKLSSSNCYLELQAGAGGTESHDWTNMLFKMYTRWAESRGFTLRPLNSSAGDEAGLRSVMVFVEGDSAYGWLRSEAGVHRLVRNSPYDPTGRRHTSFSQVRVFPEAGAGSGGANAVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERQAKRNEYASGLGDNAFGNQIRSYVLTPYQMVKDHRTGKQEGDVFAVLGGELDAFIDAALTA 1393 S+++FE + L+S ++DI + RL + ++ D G + KE A++ ++++ V+ L E + +EM++MA E E + EC +++ L A++ + E LL G NC++E+QAGAGG ES DW ML +MYTRWAE +GF ++ L+ S G+ GLRSV V V+G A GW R+EAGVHRLVR SP+D +RHTSF+QVRVFPE+ + S ++AVEIPAKDL++DT R+QGAGGQ VNTTDSAVR+ HLPTGLVA Q++RSQH+N+ A+ LRAK+ + +E + + +R Y GLGDN++GNQIRSY L PYQ+VKDHRTG + G+V VL G++D ++ AL A Sbjct: 88 SSAAFESAYAKVRRALDLISQKVDILGCKKRLANTRDELEKEDVWKDPHRMGDLSKEAARLAAEIDPVESLAKESRVLKEMYDMAVGEGEATIAEECADRMVQLAVDADKLQMEILLKANGPADEGNCFVEIQAGAGGRESADWVEMLLRMYTRWAEDKGFRVQSLHESVGEGGGLRSVTVKVDGHLAMGWFRTEAGVHRLVRMSPFDANKKRHTSFAQVRVFPESTSSS--SSAVEIPAKDLRIDTYRSQGAGGQSVNTTDSAVRVVHLPTGLVATCQNERSQHRNKAMALDVLRAKLARLQEAKDERERASYVEGLGDNSWGNQIRSYTLQPYQLVKDHRTGVEIGNVTRVLDGDIDELVEGALAA 453
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Match: G4ZDJ3_PHYSP (RF_PROK_I domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDJ3_PHYSP) HSP 1 Score: 336 bits (861), Expect = 3.660e-106 Identity = 172/335 (51.34%), Postives = 236/335 (70.45%), Query Frame = 2 Query: 383 LKELDALVSDPKLYDDSVTAGKVVKERAKVESKLEAVKGLTSELQTWREMHEMASLEDEEELLAECIEKVTALRKQAERARAETLLSLGGKLSSSNCYLELQAGAGGTESHDWTNMLFKMYTRWAESRGFTLRPLNSSAGDEAGLRSVMVFVEGDSAYGWLRSEAGVHRLVRNSPYDPTGRRHTSFSQVRVFPEAGAGSGGANAVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERQAKRNEYASGLGDNAFGNQIRSYVLTPYQMVKDHRTGKQEGDVFAVLGGELDAFIDAAL 1387 L EL + P L+DD+ A VV+ +ES+ + L +E+H MA E++E +L EC+ + A+ A++ R E LLS + + +C+LE+QAGAGGT+S DWT ML +MY RW E+RGF ++ ++ S G+EAG RSV++ ++G AYGW +SEAGVHRLVR SP+D GRRHTSF+QVRV+P A G + +EI KDL++DT R+ GAGGQHVNTTDSA+R+THLPTG+V SQS+RSQH+N+ A+ LRAK++QR+ +E K+ ++A GLG+NA+GNQIRSYVL PYQ+VKDHRT EG+ VL G++D FI+ L Sbjct: 107 LAELREEAAAPDLWDDATRAASVVQRLGALESRETRAEELHRRFLDTKELHLMAMEEEDEPMLRECVNAMAAVHADAQQLRLELLLSH--ESDARSCFLEIQAGAGGTDSCDWTAMLARMYARWGEARGFQVQNVDESVGEEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAEGRS-SEEIEISTKDLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVQSQSERSQHRNKAEALAVLRAKLYQRKLDEEARKKQQFAQGLGENAWGNQIRSYVLYPYQLVKDHRTNYSEGNTAQVLDGDIDHFIEKML 438
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Match: A0A6A3HWT3_9STRA (Peptide chain release factor 2 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HWT3_9STRA) HSP 1 Score: 335 bits (860), Expect = 5.670e-106 Identity = 174/350 (49.71%), Postives = 243/350 (69.43%), Query Frame = 2 Query: 383 LKELDALVSDPKLYDDSVTAGKVVKERAKVESKLEAVKGLTSELQTWREMHEMASLEDEEELLAECIEKVTALRKQAERARAETLLSLGGKLSSSNCYLELQAGAGGTESHDWTNMLFKMYTRWAESRGFTLRPLNSSAGDEAGLRSVMVFVEGDSAYGWLRSEAGVHRLVRNSPYDPTGRRHTSFSQVRVFPEAGAGSGGANAVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQREEEERQAKRNEYASGLGDNAFGNQIRSYVLTPYQMVKDHRTGKQEGDVFAVLGGELDAFID------AALTAEHSKGAA 1414 + EL + P L+DD+ A VV+ A +ES+ L +E+H MA ED+E +L +C+ + +R A++ R E LLS + + +C++E+QAGAGGT+S DWT ML +MY RW E+RGF ++ ++ S GDEAG RSV++ ++G +YGW ++EAGVHRLVR SP+D GRRHTSF+QVRV+P A G + +EI +KDL++DT R+ G GGQHVN+TDSA+R+THLPTG+V SQSDRSQH+N+ A+ LRAK++QR+ +E KR ++A GLG+NA+GNQIRSYVL PYQ+VKDHRT EG+ VL G++D FI+ AA T+ S G++ Sbjct: 107 IAELREEAAAPDLWDDATHAASVVQRLAALESRETRASELHRRFLDTKELHLMAMEEDDEPMLRDCVNAMAVVRADAQQLRLELLLSH--ESDARSCFVEIQAGAGGTDSCDWTAMLARMYGRWGEARGFQVQHVDESVGDEAGFRSVVLRLDGAYSYGWAKTEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAEGRSDSE-IEISSKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKAEALAMLRAKLYQRKLDEEARKRQQFAQGLGENAWGNQIRSYVLHPYQLVKDHRTNYSEGNTAQVLNGDIDHFIEKMLLHQAATTSSESDGSS 453 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17071.1 >prot_C-linearis_contig97.17071.1 ID=prot_C-linearis_contig97.17071.1|Name=mRNA_C-linearis_contig97.17071.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=460bp MSSVRIQHLARPASERLARCCQFLLSPTSPRTSNQQQQQQQDRGTSPAARback to top mRNA from alignment at C-linearis_contig97:195075..200690+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig97.17071.1 ID=mRNA_C-linearis_contig97.17071.1|Name=mRNA_C-linearis_contig97.17071.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5616bp|location=Sequence derived from alignment at C-linearis_contig97:195075..200690+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig97:195075..200690+ >mRNA_C-linearis_contig97.17071.1 ID=mRNA_C-linearis_contig97.17071.1|Name=mRNA_C-linearis_contig97.17071.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2760bp|location=Sequence derived from alignment at C-linearis_contig97:195075..200690+ (Chordaria linearis ClinC8C monoicous)back to top |