Homology
BLAST of mRNA_C-linearis_contig97.17068.1 vs. uniprot
Match:
A0A6H5LBV9_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBV9_9PHAE)
HSP 1 Score: 491 bits (1263), Expect = 9.860e-150
Identity = 429/880 (48.75%), Postives = 487/880 (55.34%), Query Frame = 2
Query: 701 VLDTSVTSLEVKKPSWQKARILHLSTQLEDSMFNSKESLAEYGDVSTLPAQIKHHCLLLATRKTTTSNAPAPGTAGGVRSFAATPVS-RGTPTYRSV---QVKTPTNGPVRSSG---AGHGRSGSGSLVPSDSARFSQPAPRDPA---AGEAAA-SQPQPLSYVWTGAGHELNVGAGGGESGSVGHDGAVEHRSVPGGGSNGASTTGYSMLLLPASSAMTTAVDVSSADTPHSSHGETTEDDMXXXXXXXXXXXXXKLHKAPEAAAPSATLSRTRHDASLAPXXXXXXXXXXXXANTLVQQGQEKGEVTEQAHVEAVIAAASLGEDT-VWNGGVQRGE-PGVRQLL--EGAHQPQS-----QQHRKATEAEVRQHALRLLQCRLLLLTHASTCSKGGGSCQLAPLCDSVRQLLQHLQSCRDEKSCEFSHCKSSKAVLQHKHLCTDSACRLCCSVKDISQKSFWANARHLHKQRLEESHELRRKKRQREGKAVAPPRKLQAEKAK-GKECCSGLDEAGNYLGDISLGFFLRQATAVKARK-IGKAKENGGETASPNSSST-------------------------AVASSSPAQAHAGTITTPAAGSKRSHDGAAKSGVEAPRKTRSSPSAVARTQPQTQTE----TRVEAARTPPSSGVGSPASAFPAFPSPVSSPR---LRRSSSSSVSWSAL-LTQHQLPPPRGGRSPRPQDGLAVQVHASDAQVSAKKPKAVVVDAEDVCPGGSETSXXXXXXXXXXXXXXXXXXXXXXXXXXLAVVIPPLGSGAVVGHLRSPSEIMLDDIAESLADTTRKPSFARMQSVQAFLDDHVELRASASFGDVSAMVEHWMSLED---NN-----DAENLEDENGMEAFSF 3151
+L++ VT L+ KKPSWQK RILHLSTQLEDSMFNSK SLAEY D STL A+I HHC LLAT KT + A GG+ SF TP+S R P+ S Q P P G AG G SG P P PA AG AA + P + TG E GE G +G +P SSHG+TTEDDM XXXXXXX K E A SA S D P Q E+ + +Q V+A+ AA+SLG T N G G+ P V +LL E H + QQH KATEAEV+QHALRLLQ RLLLLTHASTCS+ G C+LAPLCDSV+QLL+H+QSC ++KSC F HCKSSKAVL HKH+CTDSAC LC SV+D+SQK FWANARH+HK+RLEESHE RRKKRQ EG+ VA PRK+ AEKAK GKECC GLDE GN LGDISLGFFLRQ AVKARK + A +N T + N+ S + S+ Q G + +R D A SPS AR Q + T+ A+ S G PA P P+P SSPR L S SVSWS+L +T P D + + K V D+EDV GG E S XXXXXXXXXXXXXXXXXXXXXX VVIPP+G GAVVGHLRSPSEIMLDDIAESLADTTRKPSFARMQSVQAFLDDHVELR SASFGDVSAMVE WMSLED NN DA+N+E ENGM AFSF
Sbjct: 32 LLESIVTCLQTKKPSWQKTRILHLSTQLEDSMFNSKASLAEYADTSTLSARINHHCRLLATIKTAATPLAA-ANRGGLHSFVGTPMSGRVAPSRSSAMPRQQPCPAQPPQAVRGYVTAGEGDSGERPASVGIGGVADTPPPYAPAGLPAGAGAAMTSPSRVPTALTGQAQERQQEQLRGEQGGIGWS------------------------------------------SPRSSHGQTTEDDMDDKEXXXXXXXDDKPGDEAEIVA-SADRSLQNRDLDGLPAAP--------------MQEDERQDAQQQQLVDALAAASSLGGLTRKGNDGTLLGKAPQVDELLILEDGHGHEMGMEMVQQHPKATEAEVKQHALRLLQSRLLLLTHASTCSENVGDCRLAPLCDSVQQLLRHMQSCGNKKSCRFPHCKSSKAVLHHKHMCTDSACGLCGSVRDLSQKCFWANARHMHKRRLEESHEERRKKRQSEGRTVARPRKILAEKAKAGKECCYGLDERGNDLGDISLGFFLRQDKAVKARKKMITAAQNNDATTTANTGSXXXXXXXXXXXXXXXXXXXXXXXXGGGLLPSALQQHGQGQL-------QREADSGA------------SPSPPARAQVGSMRSHERGTKGHASELALSQACGQPAQTPPP-PAPASSPRSPRLGHPRSLSVSWSSLSMTASXXXXXXXXXXP-----------GGDIATATGRDK-VDHDSEDVSGGGFEASSVEAXXXXXXXXXXXXXXXXXXXXXXXTVVIPPVGLGAVVGHLRSPSEIMLDDIAESLADTTRKPSFARMQSVQAFLDDHVELRESASFGDVSAMVEQWMSLEDADKNNMDADADADNME-ENGMGAFSF 820
BLAST of mRNA_C-linearis_contig97.17068.1 vs. uniprot
Match:
D8LKZ2_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ2_ECTSI)
HSP 1 Score: 459 bits (1182), Expect = 2.560e-139
Identity = 407/837 (48.63%), Postives = 456/837 (54.48%), Query Frame = 2
Query: 794 MFNSKESLAEYGDVSTLPAQIKHHCLLLATRKTTTSNAPAPGTAGGVRSFAATPVSRGTPTYRSVQVKTPTNGPVRSSGA-------GHGRSGSGSLVPSDSARFSQPAPRD----PAAGEAAASQPQPLSYVWTGAGHELNVGAGGGESGSVGHDGAVEHRSVPGGGSNGASTTGYSMLLLPASSAMTTAVDVSSADTPHSSHGETTEDDMXXXXXXXXXXXXXKLHKAPEAAAPSATLSRTRHDASLAPXXXXXXXXXXXXANTLVQQGQEKGEVTEQAHVEAVIAAASLGEDTVW--NGGVQRGEPGVRQLL--EGAHQPQS-----QQHRKATEAEVRQHALRLLQCRLLLLTHASTCSKGGGSCQLAPLCDSVRQLLQHLQSCRDEKSCEFSHCKSSKAVLQHKHLCTDSACRLCCSVKDISQKSFWANARHLHKQRLEESHELRRKKRQREGKAVAPPRKLQAEKAK-GKECCSGLDEAGNYLGDISLGFFLRQATAVKARK--IGKAKEN--------------GGETASPNSSSTAVASSSPAQAHAGTITTPAA----GSKRSHDGAAKSGVEAPRKTRSSPSAVARTQPQTQTETRVEAARTPPSSGVGSPA--SAFPAFPSPVSSPRLRRSSSSSVSWSALLTQHQLPPPRGGRSPRPQDGLAVQVHASDAQVSAKKPKAVVVDAEDVCPGGSETSXXXXXXXXXXXXXXXXXXXXXXXXXXLAVVIPPLGSGAVVGHLRSPSEIMLDDIAESLADTTRKPSFARMQSVQAFLDDHVELRASASFGDVSAMVEHWMSLEDNN--------DAENLEDENGMEAFSF 3151
MFNSK LAEY D STL A+I HHC LLAT KT A GG+ SFA TP+S G + V P + S A G G SG + P P PA AA + P + TG E GE G NG S+ P SSHG+TTEDDMXXXXXXXXXXXX K E A SA S D P Q E+ + +Q V+A+ AA+SLG+ T +G + P V +LL E H + QQH KATEAEV+QHALRLLQ RLLLLTHASTCS+ G C+LAPLCDSV+QLL+H+QSC ++KSC F HCKSSKAVL HKH+CTDSAC LC SV+D+SQK FWANARH+HK+RLEESHE RRKKRQ EGK VA PRK+ AEKAK GKECCSGLDE GN LGDISLGFFLRQ AVKARK I A++N GG P + +A T +P A GS+RSHD K A+ PS G PA S PA S SPRL S SVSWS+L P P AV + +A V D+EDV GG E S XXXXXXXXXXXXXXXXXXXXXX VVIPP+G GAVVGHLRSPSEIMLDDIAESLADTTRKPSFARMQSVQAFLDDHVELR SASFGDVSAMVE WMSLED DA+N+ DENGM AFSF
Sbjct: 1 MFNSKTCLAEYSDTSTLSARINHHCRLLATIKTAAKPLAAANW-GGLHSFAGTPMSGGVGPSSNSAVPGQQPCPAQPSQAVRGELTAGEGDSGERAGPVGSGGVAGSPPPYALAGFPARAGAATASPSLVPTALTGQQQERQQEQLRGEEGG-----------------NGWSS-------------------------PRSSHGQTTEDDMXXXXXXXXXXXXDKPDDEVEVVA-SADRSLQNRDLGGLPATP--------------MQEDERQDAQQQQLVDALAAASSLGDRTRKGNDGSLPDKAPQVDELLILEDGHGHEMGMKMVQQHPKATEAEVKQHALRLLQSRLLLLTHASTCSEDIGDCRLAPLCDSVQQLLRHMQSCGNKKSCGFPHCKSSKAVLHHKHMCTDSACGLCGSVRDLSQKCFWANARHMHKRRLEESHEERRKKRQSEGKTVARPRKILAEKAKAGKECCSGLDEQGNDLGDISLGFFLRQDKAVKARKKIITAAQDNDTXXXXXXXXXXYTGGSGLLPWALQQHGQGQLQREADPSTSPSPPARAQVGSERSHDRGTKG----------------------------HASELAPSQACGQPAQTSPPPALASSPRSPRLGHPRSLSVSWSSLSLTASSPTP------------AVLTASPGGIATATGRDEVDHDSEDVSGGGFEASSVEAXXXXXXXXXXXXXXXXXXXXXXXTVVIPPVGLGAVVGHLRSPSEIMLDDIAESLADTTRKPSFARMQSVQAFLDDHVELRESASFGDVSAMVEQWMSLEDTGKNTMDADADADNM-DENGMGAFSF 738
BLAST of mRNA_C-linearis_contig97.17068.1 vs. uniprot
Match:
A0A5J4NAB4_9TREM (Histone acetyltransferase n=2 Tax=Paragonimus TaxID=34503 RepID=A0A5J4NAB4_9TREM)
HSP 1 Score: 65.5 bits (158), Expect = 1.230e-6
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 2
Query: 1775 LLQCRLLLLTHASTC----SKGGGSCQLAPLCDSVRQLLQHLQSCRDEKSCEFSHCKSSKAVLQHKHLCTDSACRLCCSVK 2005
L+Q +L LL HA C +KG S + C ++RQ+L H++ C ++ C F+HC+SSK +L+H HLC C +C +V+
Sbjct: 26 LMQQQLALLLHAEQCRRLENKGIASNCMINHCCAMRQVLSHIEKCLCDEGCNFAHCRSSKLILRHFHLCNRKLCEVCNAVQ 106
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17068.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 3
0 1 Expect = 9.86e-150 / Id = 48.75 Expect = 2.56e-139 / Id = 48.63 Expect = 1.23e-6 / Id = 39.51 Sequence A0A6H5LBV9_9PHAE D8LKZ2_ECTSI A0A5J4NAB4_9TREM back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 70.9 Seed ortholog evalue 3.1e-09 Seed eggNOG ortholog 164328.Phyra77146 KEGG ko ko:K04498 KEGG Pathway ko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215 Hectar predicted targeting category other localisation EggNOG free text desc. Histone acetylation protein EggNOG OGs 3Q7GA@4776,COG5076@1,KOG1474@2759,KOG1778@2759 Ec32 ortholog description Zinc finger, TAZ-type Ec32 ortholog Ec-11_006100.1 EC 2.3.1.48 COG Functional cat. K Best tax level Peronosporales Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko03000,ko03029,ko03036 Exons 12 Model size 5198 Cds size 2361 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930829.454719-UTR-C-linearis_contig97:168182..168975 1622930829.454719-UTR-C-linearis_contig97:168182..168975 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 168183..168975 + 1690881271.2262034-UTR-C-linearis_contig97:168182..168975 1690881271.2262034-UTR-C-linearis_contig97:168182..168975 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 168183..168975 + 1622930829.6786108-UTR-C-linearis_contig97:174987..176596 1622930829.6786108-UTR-C-linearis_contig97:174987..176596 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 174988..176596 + 1690881271.3657231-UTR-C-linearis_contig97:174987..176596 1690881271.3657231-UTR-C-linearis_contig97:174987..176596 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 174988..176596 + 1622930829.7031105-UTR-C-linearis_contig97:176858..176951 1622930829.7031105-UTR-C-linearis_contig97:176858..176951 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 176859..176951 + 1690881271.3762975-UTR-C-linearis_contig97:176858..176951 1690881271.3762975-UTR-C-linearis_contig97:176858..176951 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 176859..176951 + 1622930829.7542357-UTR-C-linearis_contig97:177897..178239 1622930829.7542357-UTR-C-linearis_contig97:177897..178239 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 177898..178239 + 1690881271.3900032-UTR-C-linearis_contig97:177897..178239 1690881271.3900032-UTR-C-linearis_contig97:177897..178239 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 177898..178239 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930829.4741738-CDS-C-linearis_contig97:168975..168999 1622930829.4741738-CDS-C-linearis_contig97:168975..168999 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 168976..168999 + 1690881271.244069-CDS-C-linearis_contig97:168975..168999 1690881271.244069-CDS-C-linearis_contig97:168975..168999 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 168976..168999 + 1622930829.4969397-CDS-C-linearis_contig97:169346..169800 1622930829.4969397-CDS-C-linearis_contig97:169346..169800 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 169347..169800 + 1690881271.260845-CDS-C-linearis_contig97:169346..169800 1690881271.260845-CDS-C-linearis_contig97:169346..169800 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 169347..169800 + 1622930829.5201914-CDS-C-linearis_contig97:170451..170700 1622930829.5201914-CDS-C-linearis_contig97:170451..170700 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 170452..170700 + 1690881271.2735326-CDS-C-linearis_contig97:170451..170700 1690881271.2735326-CDS-C-linearis_contig97:170451..170700 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 170452..170700 + 1622930829.5363772-CDS-C-linearis_contig97:170721..170951 1622930829.5363772-CDS-C-linearis_contig97:170721..170951 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 170722..170951 + 1690881271.2859523-CDS-C-linearis_contig97:170721..170951 1690881271.2859523-CDS-C-linearis_contig97:170721..170951 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 170722..170951 + 1622930829.555213-CDS-C-linearis_contig97:171455..171610 1622930829.555213-CDS-C-linearis_contig97:171455..171610 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 171456..171610 + 1690881271.2959027-CDS-C-linearis_contig97:171455..171610 1690881271.2959027-CDS-C-linearis_contig97:171455..171610 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 171456..171610 + 1622930829.5723865-CDS-C-linearis_contig97:171929..172065 1622930829.5723865-CDS-C-linearis_contig97:171929..172065 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 171930..172065 + 1690881271.305312-CDS-C-linearis_contig97:171929..172065 1690881271.305312-CDS-C-linearis_contig97:171929..172065 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 171930..172065 + 1622930829.5897863-CDS-C-linearis_contig97:172776..172872 1622930829.5897863-CDS-C-linearis_contig97:172776..172872 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 172777..172872 + 1690881271.315789-CDS-C-linearis_contig97:172776..172872 1690881271.315789-CDS-C-linearis_contig97:172776..172872 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 172777..172872 + 1622930829.612483-CDS-C-linearis_contig97:173300..173393 1622930829.612483-CDS-C-linearis_contig97:173300..173393 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 173301..173393 + 1690881271.3268912-CDS-C-linearis_contig97:173300..173393 1690881271.3268912-CDS-C-linearis_contig97:173300..173393 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 173301..173393 + 1622930829.6354187-CDS-C-linearis_contig97:173784..174561 1622930829.6354187-CDS-C-linearis_contig97:173784..174561 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 173785..174561 + 1690881271.3402202-CDS-C-linearis_contig97:173784..174561 1690881271.3402202-CDS-C-linearis_contig97:173784..174561 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 173785..174561 + 1622930829.653299-CDS-C-linearis_contig97:174840..174987 1622930829.653299-CDS-C-linearis_contig97:174840..174987 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 174841..174987 + 1690881271.3532825-CDS-C-linearis_contig97:174840..174987 1690881271.3532825-CDS-C-linearis_contig97:174840..174987 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 174841..174987 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17068.1
>prot_C-linearis_contig97.17068.1 ID=prot_C-linearis_contig97.17068.1|Name=mRNA_C-linearis_contig97.17068.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=787bp
MFNSKESLAEYGDVSTLPAQIKHHCLLLATRKTTTSNAPAPGTAGGVRSF back to top mRNA from alignment at C-linearis_contig97:168183..178239+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig97.17068.1 ID=mRNA_C-linearis_contig97.17068.1|Name=mRNA_C-linearis_contig97.17068.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10057bp|location=Sequence derived from alignment at C-linearis_contig97:168183..178239+ (Chordaria linearis ClinC8C monoicous)ATGGAATTGGCGGAATGGGGGGGGTTAGGGTTAGGGTTAGGGTTACGCAC
CGCAGAAGGTGGGCGGGGGCCTCAGGGAGAGGAGCCTTTTGTATGGCCAC
GGTTCAGATGTTCTGGCAAGATGTACCGCGTGGCAATGCGCCCCTGCGAA
CTCTGGAAAAAAATGTGAAGATGAAAAAGAAGGAAAAAAAACTCGGAACG
GGGTCAAAGCATCACGAGCACCGCAAGACCGTGGCAAAACAGTCGACGTT
TGGTGATTGGGACACGCCGGAGAGATTACCGTCGCTGTAACCGTCTTTGC
ATGCAGCAGCAGTACGCGGTTGGAATGGAAAAGGGGAGGTAAAGGGAGGG
GAGTTGTTAAAGGGCCGTGTTCGTGTCGCGTGATCAGCAGGGTAACTTTT
CGGCCGCAATTTCCTCGTCTTTTTTTTGTATGTAGTGGGTGTGTTCTCTA
GGATATTGCGTTGTTGGAGTTTTTATGCCCCCCCCCTGGGCTCATGTGAA
AAAAACGACAAAGGCGTAGAATTTTCACGCTATAACTAACCTGTGGTGCG
TGCAATTGTTCTATATCGTGTACCTGGCATCGCCTTCAACAAAACCTCGC
TCGCTGCTTTTTCCTGTGTGCCCTCCCACGTTGTTACCGATGCTCCGGAC
CACCGCCGCTACTTTGGCGCCAATCGCTTGCACAATCCTTCCACTGTGCT
GTGCTCGACACCAGCGTGACAAGCCTCGAGGTGAAGAAGCCCTCCTGGCA
AAAGGCCCGCATCCTTCATTTGTCCACGCAGCTGGAGGACTCC ATGTTCA
ACTCGAAGGAATCTCTG GTATGTACTTTATGATGTTCAATTTTCGTCGAA
AAGGAACAACTAACTGAAACACCGAATCGCTCAAAAAAAAACGTGTACCT
GTAAGCCTGGGGCGGTGAGGGAAGGGTTAGTGTGTAAACAACAGTCCCCC
CTGGAACTATGTATTCGTGGGTCGGACGTATGTATACCGCTGACGTTTTG
TCGAACAATTAATTGTTATAACTCCCCCGCCGCGCAGTCCACGGAAAACG
TCCCGCGTGCCTGTGAAAATGTCCCGCTCGTCGATCCAGCGTTTTTTTTT
GTGGTGGGGTCTCTACAACCGCGCCCACGGCATAATTGGTTGAACATGTT
TTCGAAAAAAACAGGCGGAATACGGAGACGTGTCAACGCTGCCGGCCCAA
ATCAAGCACCATTGTCTACTCCTGGCGACCCGCAAGACCACGACCAGCAA
CGCGCCGGCGCCGGGCACCGCCGGGGGCGTTCGCTCCTTCGCCGCCACCC
CGGTCAGCAGGGGCACGCCCACCTACAGGAGTGTTCAGGTGAAGACCCCC
ACGAACGGCCCTGTGAGGTCCTCTGGCGCCGGACACGGCCGCAGCGGCAG
CGGCAGCTTGGTGCCCTCAGACTCCGCCCGCTTCTCGCAGCCGGCGCCTC
GAGACCCAGCAGCTGGAGAAGCGGCAGCATCCCAACCTCAACCTCTCAGT
TATGTTTGGACCGGCGCGGGGCACGAGCTGAATGTTGGGGCTGGCGGAGG
AGAGTCGGGAAGCGTGGGTCACGATGGCGCGGTGGAGCACAGGAGCGTGC
CGGGTGGCGGTTCGAATG GTGAGCTCTCTTGCCACGTGTGCCAAGGCTAG
CTACTTTTTTGCGTCGCGGTATAGTGTAGACCCCGGTGATGATTGCGATG
GGGCTCGGTAGCGGACCTGCTTCGAGGGTAGTGTAGTGCGATAACAAACG
AGAGCTTATTGAGTGTGGTATACGGGTTGAGCTTTGATATTTCTGCGCTG
CCTATGTGATCAACTACGCAAACGTTGCACACACACATTTTGTGCACTTT
GTAGGTTGAAGTTTTTTTTTTAGTTTTTCTCTTGCTTTGTGGCGATGACT
ACAAAGTCATTTGTATCGTTGCCCACCACCGGTACACCTTCGTGACGTGA
ATCGCAATCGTGTGAGTTTGTTACTGAAGCATGCGAGCGGGCGGTCGTTG
CTGCCGTCTGTACTTTCGGGCACTCGTCTCCATGCCATGTCACCTGACGC
CATCGTATGACATCTCATTGTCCATGGTGATATACGAAGTATGTTCGTTC
TGCAGCCTACGTTCTTCGTTGCTCATCGTGCACGCGGCAACCAGCTCAGC
TCGTGCATTCCTACGACGCTATCTGGCTGGCTGGCGTATGAACCTCGCTT
CCTAACCCCTTGCTGCCCTCGTCCCCCTCTGTCGCCGTGTTTATGGTCAC
GCGTGACGCTTGTCAACAGGAGCTAGCACCACCGGCTACTCGATGCTGTT
GCTACCGGCATCATCAGCCATGACGACGGCGGTGGACGTATCGAGTGCAG
ATACCCCCCACAGCTCCCACGGCGAGACGACCGAGGACGACATGAACGAC
GACTCTGTCGATGATGACGATGATGGTGACGACAAACTCCACAAAGCGCC
AGAGGCTGCGGCTCCCTCTGCCACGCTGTCCAGGACGCGCCATGATGCTT
CGTTGGCTCCTGCTGCTC CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGTTGCCAACACGCTGGTACAGCAGGGGCAGGAGAA
GGGAGAAGTTACGGAGCAAGCGCATGTGGAGGCAGTGATTGCTGCGGCGT
CGCTAGGAGAGGACACGGTGTGGAACGGTGGAGTGCAAAGGGGGGAGCCG
GGGGTGCGCCAGCTCTTGGAGGGGGCTCATCAGCCCCAGAGTCAGCAGCA
CCGTAAGGCGACAGAGGCA GTGAGTAGGAAGGAAGGCCCCGTGTGTCTGA
TCGGAGCACCGCGTCATGACTACTGCATTGAATATATACTCTGACGTAGT
CCATGATTCCACTTCGGCGAGGGATCACCGTAGCCCGATAGCCACCGGTT
ATGTTACGTCGACCACGTGCTGTTTTTTGTAGTAGCGGTTTGTGTTTTTG
GCGTGCCTCTGTGTCTTCTATCACATGTGATTGCTGTTTGGTATTCGACG
TCATCACATATGTGTAAAGGAGCGAAGGTTACCTTCTGTTTCAGGGACGA
GGCTCGTGTGGTGCCATTGACACTATTGATTTACGCGATATGCGCAGCTG
CAGTACTTGCAACAATCCCGAGGCCACGTTTAAATTTGAGCCGCCGCAAC
TATGCTGCTGCTGCCACTCAAGCGTCGCTCATGGCACCTCGAGGAACATG
TCTTAAATGCCGTTGGCTCCATGTGTTGTTTCTTCGCGCCACGTCTGCTT
GTCTTCTTGTGTTTACAATGCAGGAGGTGAGGCAGCACGCGTTGCGCCTG
CTCCAATGCCGCCTCCTGCTGCTGACGCACGCCTCCACGTGTTCGAAGGG
GGGAGGGTCCTGCCAACTGGCCCCGCTGTGCGACTCCGTGCGACAGTTGC
TCCAACACCTGCAGTCTTGCAGAGACGA GTGAGTGCCCATCCTGCTGACT
GCTGCTGCCCCGCCACCTGATTGGCTGAAGTTGCCCGCAGCGTACAAGTA
GCTGTCTAAATTACCAAGCCAGCGTCGCTTGTTCTGAACCTGGCTGTTGA
TGGTACTCATGGCGAGGAGGAGCTGCCTTTGGTGACGTTACGCTACGCCA
TTGTCTCGGCTGTTTCCTCCCGTATTGGATATGGTGTGCATGAAAAAAAA
TGGTCTATTGTTCCCTCCACCCGGTGCGTTGTCCTCTGTGACACGGCACG
TGGGCATGACCAAGCCGCGATTTTCCTCGCGCTGCGGCCATCTCCAGGAA
ATCGTGCGAGTTTTCCCACTGCAAGTCTTCCAAGGCCGTGCTCCAGCACA
AGCATTTGTGCACCGACTCGGCGTGCCGGCTCTGCTGCAGCGTGAAAGAC
ATTTCGCAGAAGTCCTTCTGGGCAAACGCGAGG GTGAGTGAACACGTCCG
AGGATGTTTGGAAGTACATAGGTACGTTGATGACAAGACATTGCCTGGTT
ATAGCTAGAGCTTGGCTGTGGTGGTTGAATGGGAGCACCATGACGTTACA
CACGTTACAGGTAGGTCGAGAGTACGAAAGTCGAGTGTCGAGTGTCGAGT
GTCGTCCCAAGATAAACCGTGCAGGGTTGTTGTTGCCTTTCCCCCCCCAA
GCTGCACTGGGTCGTTCGATCGGTCTTGCGCCCCCCCCTCTACTTGCACC
CCAGTAGGGCACGCCAAAGAAGCAACTATAAAAGAAAGCCTCATCTGAAC
GCCGTCAGTGAGCTTGTGCCGACAACGGCGCCGGAAGAGGTTCACAAGTT
TGGCTGTACATGTATCCAGTAGAATCCCAACGAAGGCGGCTACTGCTGTA
CGAAGAATTCGTCAGAAAGTGAAGCAACCTATATAGGTGATGAGAAATCG
TTGCTTTCAGTCGAGAGCGAACAATTGCAACTGCTTGTAGCCGACTGATC
ATTTACCCTGTCCTCTTCGCGTTGCCGTGTCTCGTGGCACCCAAGGGCAT
GCTTTGCCACTGCTCGCGCTGTTCCAATAGGCGCATGATGCGAGGATAGG
CCGGTCACGCGCGAGCACCAAAATTGTATCCGCACGAAAAAGATTTGACT
AACGTTTTGACTAACTCGCCCCCCGTTTCCGCCTCTTCTCACAGCACTTG
CACAAGCAGCGGCTGGAGGAGAGCCACGAGCTGCGGCGCAAGAAACGGCA
GAGGGAGGGCAAGGCTGTTGCCCCGCCGCGCAAGCTGCAG GTGAGCGATC
GAATGCCCCATCCCTCATTGTAGTTGTGTGCTGATTCGTTCAGTGTTTGA
TTTGCGGCTGTGCTGTGTCATGCTGTCACGTCTTCAACTCTGTTTTTCCG
TATTTTGTGTATTTTCCCGCTCCTTCTCCTCTTGTTATCGTTACAACGTG
AGGGCGGGGTGTTCGTTTGTGGCGTCGTCGTTGCGCAATCGACGATCTTG
CTTTTCCTCCCTATCAAGCGCATACTGCAGCTGACTGGCCCCGACTGTTG
GTGGCTCATTGTATTGTACATGATCGGTTTTGATTCGTCTAGGTAAAATT
GAAAACACGAAAGACATACATATGGCATGCATATGTACTTCGAAGTAGAA
CTTTTTCAAGTACTCAAAAATCCTCTTGGTGTCGCCGTTTTGTGGTGCCT
TTGTTCCCTCGAGAGCAGGCGGAGAAGGCCAAAGGGAAGGAGTGCTGTTC
TGGGCTTGATGAGGCGGGAAACTATCTGGGCGACATTTCGCTAGGGTTCT
TCCTCAGACAG GTGTGTACTCCGTATGTTCCCAGTGGAAGCAGCAACAAC
AACCTATGATATATTTTGTTTGGTCTACTCACTACGCTGGCTTGGAGTTG
ACTTGATACGAGGATAGAACCAAACGTAGATGCAAGAAGAAAATCATTCG
AGCATTGTGGAAGCCAAGCAGATTAGTTTTTCGGGTTTCTCCGATCTGGT
CCAAGAGTAGCCACAAACGGATCAAGCTTTATTTTGTCGATACCGAGGAT
GTGGATTGAACTCTCTACACGGGTCTCGTTTTCCGTCCCCTTCTCCTTGA
AAGTGGCGAGAAGTTCCCCTCATTGAATCGAAGAGGCGCTTGTCCCTCTC
TTGGCCTTCATCCCTCTTCACACCGCCTTTATTGTTTCCCCCCCATCCAT
AGGCCACGGCTGTCAAGGCGCGCAAGATTGGCAAGGCCAAGGAAAACGGC
GGCGAGACCGCCTCTCCAAACTCCTCCAGCACCGCCGTGGCCTCCTCTTC
CCCAGCCCAAGCCCACGCCGGCACCATCACCACCCCCGCTGCCGGGAGCA
AGCGCAGCCACGACGGCGCTGCCAAGAGCGGAGTCGAAGCGCCCAGGAAG
ACGAGGTCAAGCCCGTCAGCGGTCGCACGCACGCAACCGCAGACCCAGAC
CGAGACTCGCGTGGAGGCCGCACGGACACCTCCATCCTCGGGTGTAGGTT
CGCCTGCCTCCGCGTTCCCGGCCTTCCCCTCGCCCGTGTCGTCGCCAAGG
CTCCGCCGGTCATCGTCGTCGTCGGTGTCGTGGTCGGCGCTGCTAACGCA
GCACCAGCTGCCGCCTCCTCGAGGAGGCCGATCACCACGCCCCCAGGACG
GCTTGGCCGTGCAAGTGCACGCTTCAGATGCCCAGGTTTCGGCGAAGAAG
CCCAAGGCTGTTGTTGTTGACGCGGAGGATGTTTGCCCAGGCGGGTCCGA
GACGAGCTCTGCCGGGGCCTCTCCGGGCGGCAACGGCGGCGGCGGCCACC
ACGGCGGAAAGAAGGCCGCGGAGCAGGCGGGCGGGCTGGCGGTGGTCATC
CCTCCCCTCGGGTCTGGGGCCGTTGTGGGACACCTGCGGAGCCCCAGCGA
GATCATGCTGGACGACATCGCCGAGTCGCTGGCGGACACAACCCGCAAGC
CCTCTTTCGCCAGGATGCAAAGCGTGCAG GTGACTTTGTCGGCTTGTTGT
TGACCCGTGTGCGTGCTTGCTTGCTTGCTCCGATCTGCTGCGTACGCGCA
ACGCGACACAGCCCAAAGTCCAAAGGCAGTCGCGGGCGTTTTGCGGAAGT
GTCTTGCCTTTCTTCTGCTCGTTGACTTTGCGTTGCGTCCAGCGGGTAGA
TACATTCGTTTCGCCTTGCGGTGGCTTTTTCGTGCGGCCTTGGCACTCGG
GACTCACTAGGCCTGTTTTTTTGTGTTTTTGCGCTCCCTCGTTTCCTTGT
TGCGGCAGGCGTTCCTCGACGACCACGTCGAGCTGAGGGCGAGCGCCAGT
TTTGGGGACGTGAGCGCCATGGTCGAGCACTGGATGTCTCTCGAAGACAA
CAATGACGCGGAGAACTTGGAGGACGAAAACGGCATGGAGGCCTTCAGCT
TCTGA CGCCTCCGTGCTTGCTTTTGTACCGGATGGCTGCTATCCCCCGAC
GGCTGCCCCATCATGCGTGCGTCACAGCTGCTACGGCAGGCGTACGTTCA
GTAGCATCATACAGTACTCTGGATACTTTGAAGCCACAAAGCCTTGCACA
GAATGGCAAGGTGTCTTGTGGTTTCTCCCTACGGTAGTTGATAAATTACA
ACAGAGAATGAGACGTAAAGCTCTACAGCACGGCATCTAGAGGAGTGGTA
CAGTAGAGGAAGGGGCGTAAAGGGGCGGGTTGTAACGGTGATACTGGAAG
TCGGGTGTTGTTGTGTGTTGTTCTGCTGCCGAGGCATTTAGATGGTTTGA
TGCTTCGCGTGTGGCGTGGCTTTGTCGTTAGAGCGTCGATTGCCGAAGCA
ACGGGTTCATTGCTCGCTTGTCGTCAGTATCGGCATCGTCCTGCACCTTG
CTCGGCGAAACGAGCACCTACACACGTTCGACATCCTTGTACATCTTGGT
GTGTGGTCGCGTTCTGGGGGTAAAATAGAGGAGGAAAGGGCAAAGGGAAA
TCGATCGCTTGCATAGACGGGAGAGGGGTTGCATTGATACATAGACGAGA
GGAGGGCATCTCAAAAGATGTACCAGTAGAGGAGTTTAGAACATTGACGG
ATTATTGCCACGTGTTGGCATTCCGATTTTCGTGTTCGCGCCGTAGACGT
GGTGGTGTGGTCACAAGTCTGACATGACGTGGTGTGATGTGGTGTATTAC
TTCGTACTGGGATGGTATTTAATAGATGTGGCGGTTTTTTCACGGTCCAT
TGCGCTGTTCTGCGGCGTGGAACCCATGCAATCATACTGGGATTTGTCTG
TTGAGTTATATGTGTCGCTCGTTGTTTGTGACTTATTGCTGTCTTGGGTG
TGAGCGTGAATAGAGAAAAATAAAGAAAAATGTTGGGCGTGGTACTAGTT
GTGCTTCTTCTGGGGGTTGGGCCATTCATGCCTACAGCGAAAGGAAAAGG
ATGTAGTCTGTTCTTAGCTGCTGTGATATTACTGGACTGCTGTGCTGCCT
GTGGGCTTGGGAACGGCGTGGGAGGGGGGCTAAATTACATTGATAGACTG
GCGCGGTGTAGCAAGAACAGACTCGTTTTTTCACCCCGGGCGAATTGAGG
GCTATCTCACGGATGTTTTCTGCCGTCTGGTTTTCTTCTACACCGCCTAC
GAGCCGAAGGCTTTTATCTGGGGATGTTTTCCTGCCATGTCTCGGTATTC
GATTTGTCGATTAATGACCTGAAGGAGTTGGTTGTGCGAAATTGCCATGT
GTTTTCTGTTTTCGCAAGAACGGAACGAATAGAAACAAGGGCAAAGAAGG
CGGTGCGTTCCGGAAAGGCGTCCCGTGATATTTTGATTTCGTTCGTTTCG
TTTCGTTTGTGTCGGTTTTTTCACAACGACGATTGGCGTGGGATAGACGA
CGCTTACCATGCTTGACTCCCATGCGTAAGTAGAACTAGGGTTATGTATG
GCCCCCCCCGCCCCCAGTGGGCGGCGTGGCCAGAAGGTAAAGAAGGGAGG
ATTGAGACAGGAGATTGCAGGCCGATTTCGTGGCAGCGGAAGAGTGTAGG
GTGTAGGTGTGTTT GTGTTGTTGTTGTTGTTGTTGTTGTCTTCACATAAA
AAACCATCCCGATCTCTCCACCCAGTACCCCCTTTGTCCGTACTGATCCA
ACAGACACGGCCAATTTCCGTGGTCACAGAGCGCAAGGAGCCTACCATCA
ATAATACCCAAAAACCATAACGTGGCTAGCAGAAAGCCTAAATAAAACCA
CAAAAACACACGAGGGTGAGGCAACCTGCACCACGAATCAATATAGAGAA
CGCCCAATCGAACTACAGCAATAAAGTTGACCAGTCACGAAAATTCTGTC
TGCAACAGTCCGCGTGTCACATACATAAGTCGCCGAGGTAGACCTACTGC
AACTGCTGTCTGGAGTGCT GCTCAATAGACCGTCCTACAACAAAACCGCG
GCGGAGACGGCACTCAAACGACAGAATAGGAAGATCCAAAAATCAGAAAA
AAATGAACAGGGAGACGGCGGTGTTCTTCGAACGCTCGGGCCAAAACAAA
TGCAAGTCTGACAAAATGCGACAGACAAGTCATGTGTTCACCTACTACTC
ACAATCTAGACTCACGGCCTAGTGCGTATCATCGGCGTACACAGGGTTAG
TCCGGAGTGTCCTATAAAAGACCCTCTGCATGTATTTATCTAATGCAAGA
GCAAAACAATTTTTTGACACAATCGGTAGAAAATTCCATCTTCTTGCTCC
TCTCTCTTGTTCTTCGCTCTTCCTTTCACGAGGCCAGCTCCAAGCGCTCT
CGTCCATCCTCGCCCGCGTCCATGGTCTCGCGATCTCTCGTTGTTATTAG
TCCGTCGCCCCTTCTGCTCCTTCGTGCGGTATCCCTCCTCCTTTATGATG
CGCTCCGGTGCTGATCTCTTGATTTCTCGAACAGAGGATCCGACCTTACT
GATCACATCCATCCGTCAGCGACCTCCCCTCCATCCTTGTCGCCGAGTCC
ATATCCTACACACCGGTGCACACTGGGTGCAACCAGCTTTCGGCCACAGT
GTCCATCTGCCTCCGCGCACACACTAACCACGCCTGTCCGCTCACGCAGA
AAGGCTATCTATCCGATGACGCAGATAAATACTGAAAAACAGGGGGTGTG
AGTGCCTGATGCACCGTGCTGACCCAACTCTACCACCACACCACGGACGG
TGAGGACCGGGGTAGTAGCAAGAAGGAATCACTCCTTGAGGGTGAGTCCG
GCCTTACACCCGCCAGAAAGACCCTCCCCACATCGGGCCGGCCATGGCCA
TGGTCGGAAGACGAGGGAACGGAAATACAACCGGTTATTGATGTATATCT
CTGCCACAGGAGCAGATCCGCCCATGCCAACCCACATCACACGCTTGTCC
ATGGTGTTCTCGATTTATATCGCCCGTTGTTCGGTGCCAACCCCCACCCG
CCACGTTGTGTTCAACGCCAAACACTTGTTTTTCGATGTTGTTGTCATGA
TGTCCGGCGTCTATGCAAGTCGTGCTCTGATTGTAGCAGTAGGTCGAGAA
CTCCGCAATGTGGGCCGACGAACAGCAAACATCCCACTGCTGTACTGGCC
CGCATAGACACGAATCTCCTCAACCGGTCTCCAGCAGTAGGTAGTGATTA
AGCTACTGCTGTGCAAACTGGTTGACAAGGTTGGACTCTATGGCGGCGAG
CACACAG back to top Coding sequence (CDS) from alignment at C-linearis_contig97:168183..178239+
>mRNA_C-linearis_contig97.17068.1 ID=mRNA_C-linearis_contig97.17068.1|Name=mRNA_C-linearis_contig97.17068.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4722bp|location=Sequence derived from alignment at C-linearis_contig97:168183..178239+ (Chordaria linearis ClinC8C monoicous) back to top