Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 351 |
| Cds size | 267 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930827.714083-CDS-C-linearis_contig97:144520..144774 | 1622930827.714083-CDS-C-linearis_contig97:144520..144774 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 144521..144774 - |
| 1690881270.605735-CDS-C-linearis_contig97:144520..144774 | 1690881270.605735-CDS-C-linearis_contig97:144520..144774 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 144521..144774 - |
| 1622930827.727934-CDS-C-linearis_contig97:152526..152539 | 1622930827.727934-CDS-C-linearis_contig97:152526..152539 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 152527..152539 - |
| 1690881270.6197276-CDS-C-linearis_contig97:152526..152539 | 1690881270.6197276-CDS-C-linearis_contig97:152526..152539 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig97 152527..152539 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930827.767926-UTR-C-linearis_contig97:152539..152621 | 1622930827.767926-UTR-C-linearis_contig97:152539..152621 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig97 152540..152621 - |
| 1690881270.6319973-UTR-C-linearis_contig97:152539..152621 | 1690881270.6319973-UTR-C-linearis_contig97:152539..152621 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig97 152540..152621 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17067.1 >prot_C-linearis_contig97.17067.1 ID=prot_C-linearis_contig97.17067.1|Name=mRNA_C-linearis_contig97.17067.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=89bp
MTNQGTQHGLNMAHGSYEQNGESSSASHWHGHEFRHDGYMNAEKDGPTVV
DRKSWLLGGDNHQHSRRHHHFAVPPSTCAPMQGIPPMIP back to topmRNA from alignment at C-linearis_contig97:144521..152621- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig97.17067.1 ID=mRNA_C-linearis_contig97.17067.1|Name=mRNA_C-linearis_contig97.17067.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8101bp|location=Sequence derived from alignment at C-linearis_contig97:144521..152621- (Chordaria linearis ClinC8C monoicous)
GGTGAACTCATTGTGTTTTTTTCGCTGGTAGACATCCAGGAGAGGGCTCA
GGGGCGGAAGACAGACTGGTGATCAGTCTCGGATGACCAATCAAGGTACA
GCGCACCGTACATATGATAGTACATAGATGTTCTCACTGCTGAAGGTTGC
TGTGTGAGAGAGACAGATTGTTTGCGTGCGTACGGGAGAATGGCCCTTCG
GTAGTACAGACAAACCGGAGTTCCTACAAGTATCACCTCTTCGTACAGGC
ATCGGCACCTAATTTACCTACCGCAAGTTCCCGTGATGATACCAAGCGTA
CCTGCTACTCCCTCCTTCTCTCTCTCTGTTCCGTGCTCCATCCGTCTACA
ACTTCAACAAGAGAGAGAGAGAGAGAGAGAGACTGGCGTGTTCGGTGTAT
TTGTTGCATGGCAGCTTCCAAATGTTTGATGTTCCCGTTGATTTCGTGTC
GTGCCCTGCACCGCCACCTCAAGCGCCAACTCGACACTTCTTGGATCAGC
CGGTTCTTGACGCCAGCCAACGCCTGCTTCGATTGCTATGTGGCGCTAAC
TCTTTGCCGGGATCTACAGCAGCGCCGGTTATCTCCCCTTTTGTTGACGA
ACACAACTGACTCTGGATCAGCTGCAACATCACGCATACACCGAAGAGAT
CGAATGAAGAGAGCATGTTCAAGAATTCCCTATATATATTTTTTCTCGTG
TGCTCTCTTCCTACATGGCTGCCCTCATTTCTATTAAGGTAGCACGACAG
CTCTCTTGCGCCCCACTCATTGCGTTGTGTGGGGCGTAAGACTTGGTGAC
ACAAAAATAAGCGCGTGCACACAAAAGTATTATTCGTGCCCGTGGAAATG
CTAAAACAGCACTTGCCTCTTCCTTTCAGGGCGAGGCAGATAACCGTTTC
ATTCGCTGCTCACAATCCATGAGGTCTGCGGTAGAACACTCGGCGGACGA
AGAGTAAAGGCAACCCGTTTTTACATGAGAAAAAACAGATGAAGACAGCC
GGTATTTCATTGCTTGTAAAAGAGCCCTGCGACTTCTCGTTTCAAAAAAT
AAAAATAGCAGGCATGGTTGTTGTTGTTGTTGTCTTCACTTTAAACTCGG
TACAGTTGCTAATCCCTAAAATCTAGCAAGATCACAGCCCGTGGTCACAA
AAGTGCTAGAGCCATCAGAGAGTCCTAAAGAACACGCACACTTTTTTAGG
AGGGAAAGGGTACACAAGCCCGAAGAGGTACACCTTATATACCTACAGCA
AGTTATGCGTGTCCAAATCTGAGCTGCACGCCCGCAGTCTCCATTCGGCT
ACAGCAGCATCGCCCCCCCCCCCCGTTCCCGCTTCCTACCAATGAATTAG
CCGACTACAGCGGAACTGCTGTCTGAAGTGCTGTCTGTACAAAAACACAC
GGTAGGCGTGGGAACAAGGATGGAGCACGCAGCTGCTGTCTGAAGTGCTG
CCAGAATGACATTCCGCGGACATACAGTGAAAAAGAACAGCAAACCAAAC
AAAGCCATCACATCAACTGACAATATCCCGAGTCTATCCCGAACGTCTGT
GTTAGGCACAGAGTATTGTGAACATCGACAATGATTAGGAATCAACGAAT
CCACGATGCAGGTACACACTTGAGGCACCCGGGGTATCCGCGCCATCGCT
GTCGCGTCTCTCTACAAAACCAGTGACGTCATCACAAAAACCCAGCACCA
ACATCCATCCAGAAAAAAAAACGAAATAATTGCCAACACATAATGTTTGT
CCGTGCGCCACGGCTCGATGTCATCCGCATGCTCCGGTGCCGCTGCTCCG
GTGCCGCTGTGGCCAGTCCTAGCACGACCACACTCGACCCGCTCCGTCCG
TACACGCTCTCGTCGCTGTCCTTCCCAGCCGGTCCCTCGGTTTCTCCCTC
GTTGCACTTAGGGTGCGTGGTCTTCAAAAAACAAAATCTCGCGCCGAAGG
GGTCAACCAGCCCAGTCTTCAGCTCGTCGCCACCCATCCATCCTCCTTAG
ATGGCGCAGCGAAGCCAGGTTACCGAGACAGTACAGCTCCCTCTAGCAAA
CCTAGGGCCATGTACGTAGTGTCCTTCACCTTTCTGGTGGCGTCTGCCTC
CGCGCACAAAATGAGATGGACATTGCTGCCTAGCATCTGAACTTTTGTGC
CTGACGCACCAGTGCCGACCCAACTCCACCGCTGCGCACGCCTCGCGGCG
GGTGCGCAGCAGCAAGAAGGTATCGGTCCACCCGAGGGTGACCCTGAGGG
TGAGTCTAGCCTTGCTCGCTAGAAAGACCCCCCCCCTCGCTATGGGCCAT
GCCTAAGCGAAAGCCTTGGCAAGGCAGCGACGGGAAGAAGGGAGAGTTGT
AACCGGAGATAATCATTGTTTTTATTGTTTGTATTGTGTTTCTTCACATT
ATTACCTGGTATAATCGAGATTGCTAATCCCAAAAATCTAGCAACTCACA
TCTCGTGGTCACAAAAGTGCTAGAGCCATCAAAAGATCCGAAAGAAAAAC
ACACGCAGGAAATGAGGGTACACAATAATAAGACCGAAGAGGCCCTTCAT
TTCCGCCACCGTTGATGTGTGTCCAACTAACTGACCCACACGGACGCCCG
CAATCTCCATTCGACTACTTACTACAACAGACCTACCCCCCCCCTCGCGT
TCCACTACTTACCGATGCCTAGTTGCCGACTACAGCAAAGTTACTGTCTG
AAGTGCTGCCTGTACAAAGAAATGCGCTAACAGAGTAGAGACAAAAGTTG
AACGCAGCTGTGTAGTTCGATTGGGCGTTCTCTATATTGATTCGTGGCGC
AGGTTGCCTCACCCTCGTGTGTTTTTGTGGTTTTATTTTGGTTTTCTGCT
AGCTACGTTATTATTCGTGGTGCAGGTTGCCTCACCCTTATGTGTTTTTT
TTTGGTTTTCTTTTTGGCTTTCTGCTAGCCATGTTATATTGTTTGCGTAC
TGATGGTAGGCTCCTTGCACTCTGTGACCACGGGGATTGGCCGTGTCTGT
TGGATCAGTACGGGCAAAGGGTGTACTGGGTGGAGAGACCGGGATGGTTC
AAAATGTGAAGACAACAACAACAACAACAGAGGTTACTGCTGTCGGAAGT
GAAGTGCTGTCAGAATGAAAGGCCGCCAACGCTCGGTGAGGAAAAACAAC
AAAAAAGGGTCGTTATCGACCAGTTTTTTCACGAATTCGTGATTTTTCTT
CACAAATTATTTCGTGAACAGAAGCACATCATCACAACAAATACGTGAAA
AAAAAGTCCACGAATCCGTGAATCGATGCGAGCTGAAAAAATCAGCTCGC
ATTCGTGATTTTGTTTTTTTCACGGAATTTTTTAAAAACATGGTCGAGAA
CGACCCTATTAAAAAAAAAAAATGTTATATCTCGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCTTCACTTTAAACTCGGTAC
AGTTGCTAATCCCTAAAATCTAGCAAGATCACAGCCCGTGGTCACAAAAG
TGCTAGAGCCATCAGATAATCCTAAAGAACACGCACACTTTTAGGAGGGA
AAGGGTACACAAGCCCGAAGAGGTATACCTTAAATACCTACAGCAAGTTA
TGCGCGTCCAAATCTGAGCTGCACGCCCGCAGTCTCCATTCGACTACAGC
AGCATCGCCCCCCCCCCCCCTTCTCACTTCCTACCAATGAAATAGCCGAC
TACAGCGGAACTGCTGTCGGAAATCCTGCCTGTACAAAAACAAACGGTAG
GCGTGGGAACAAGAATGGAGCACGCAGCTGCTGTCTGAAGTGCTGCCAGA
ATGACATTCCGCGGACATACAGTGAAAAAGAACAGCAAACCAAACAAAGC
CATCACATCAACTGACAATAACCCGAGTCTATCCCGAACGTCTGTGTTAG
GCACAGCATTGTAAACATCGACACTGATTAGGAATCGTTCCACATTGAAG
GGTCTTCCACGATGCAGGTACACTTAAGGCACCCGGGGTATCCGCGCCAT
CGCTGTCGCGTCTCTCTACAAAACCAGTGACGTCATCACAAAAACCCAGC
ACCAACATCCATCCAGAAAAAAAACGAAATAATTGCCAACACATAATGTT
TGTCCGTGCGCCACGGTTCCATGTCGTCCACATGCTCCGGTGCCGCTGCT
CCGGTGCCGCTGTGACCAGTCCTAGCACGACCACACTCGACCCGCTCCGT
CCGTACACGCTCTCGTCGCTGTCCTTCCCAGCCGGTCCCTCGCTTTCTCC
CTCGTTGCACTTAGGGTGCGTGGTCTTCAAAAAACAAAATCTCGCGCCGA
AGGGGTCAACCAGCCCAGTCTTCAGCTCGTCGCCACCCATCCATCCTCCT
TAGATGGCGCAGCGAAGCCAGGTTACCGAGACAGTACAGCTCCCTCTAGC
AAACCTAGGGCCATGTACGTAGTGTCCTTCACCTTTCTGGTGGCGTCTGC
CTCCGCGCGCAAAATGAGATGGACATTGCTGTCTACACCGACGGCCATAA
ATAAAGACCCGTGCATCTGAACTTTTGTGCCTGACGCACCAGTGCCGACC
CAACTCCACCGCTGCGCACGCCTCGCGGCGGGTGCGCAGCAGCAAGAAGG
TATCGTGCCTAAGCAAAAGCCTTGCCAAGGCAGCGAGGGTAGGAGTATAT
AACTAACCAACCAAAGCCATCACAAAAGAAGTCGGTGCAATCACCCGAAT
CCATCCCGAAATCGTCTGTGGTAGACACAAAGTAGCAACGACACCAATTC
ACGACCGGGTGTACCATCATTGCGAGGTGCACGGTGTAGGTACGAATAAC
GCAGACATTTCTGCCGCGTCTCTCTACAAAACCAGTGACGTCATCTAAGA
AACCTACACAAAATATTCGAAAACAAAAAACAGTCCACCTATCCCATATT
ACGTCACTGACTCCTGTGTATTGAACTGGTAATCCACCACTTAGGGATTT
GTCTCTTTGAGGGGAGGTTCTTTCTTTGATCCCGTTTTGATTTATAAAAA
AAGAAGAAACTTTTGCCAAGACATGATGTCATCATGTGTCCGCCTCGCGG
GTCGATGTCGTCCTTGTGCTTTGTTGCCGCTGTGGCCGGTCCCAGCATCG
CCACACTCGACCCGTTCCGTACGTACACGCTCTCGTTGCTGTCCTCTCCA
GCCGGTTCCCAAGCTTTCTCCCTCGTTGCACTCGATCGAGGTGCTGGTCT
ATGATTTTTTTCTCGCACCGAAGGGTCAACTACGCCGCATCAGTTCGTCG
CCAACCGTCCCCGAAGGCCCTTCTCCTTGGCGAAGCCAGTAGGTTATCAA
GACAGCAGTACAGGTCCCTCTATCATCTAGGGCCGTGTACGTAGAGTCCC
TTCACGTCTTTTAGTGGCGCCTGCCTCCGCGCACAAAAACTGAGATGGAC
ATATTGCTCCCTACGCTGACTCCAAAAAGGCCCGCGCACCTGGGGTTTCT
TTCTGTGCCTGACGCACCAACTTATATTATGTAACACAAGAGCCGGTCGC
CCCGGTGGACTAGTGGTTTAACCTCGAACCCACTAGCAGCAAAGTCTGGA
GTTCGATTCCAAGCAAAGGTGTTTCTTTTGCGACTTTGCAGGTGAAAGCG
ATAACATTGCTGAAAAAGCTCGTGAGTACCAAACTTCGACTTAGCACGTT
GACGAGGGAAAGGGATGGCTGCACCCTTCTCGTGATAAAATCCAAGGCAA
GCACCGCAGGAGGAATATTGGGCAAAAAAGAAACAGAAAAAGAAGAAAAA
AGCCCCAGTGTTTACCCCTCATGTGTGACCCCGGTTGGTTCTAGTTGTAC
AGAAAAATACACTGAACAAGTGTAGTACTCTAAATACACCGCAACGTGTA
GTACACGTCTCGCCTTGATCGGAAAGGGACTGTCGCCAAAATAAATGGGA
CGAAAACACACACACACACACACACACATTGTGTACCAGGTAATATGTTT
TACCTGCACATGACCCCAAAAAAACATGACAGATAGTTCATGAGTCTTGA
TTCGTATCCTAAATTGGTTGTAAATAGAAACCAAAGACTAATTCGTAGCT
TCCAACAAATAAGCACGACTTTCTATTTTCGTAATGACTCCCAGATATCG
CACGCAAATGGAGGCATGCGACGAAAAGAGAAAAACGAAAAAGAAAGAAG
CAAACCTGCTACATAAAACGATTCCAGGTAAAACAGAGTTTTCGCCTGAT
TGAGAGCGAAGTTTCCGATTGAGAGCGAGAACCAAAAAAAATGAAAATTC
GGGTCCGGACGCCTCTCGTCATTTCTCGGGAAGTAGGGGGCGGGCTCTTC
CAAGAAGCGGCGCAAATTGAAGGTCTCCTCAGCAGCGTCGCGTGCATATG
CGTCTCATCGCCATCGGCTGCTGCAGCCAGGAGCTACACAAGTTGCTAGA
TTTCCCCAGATTGGCTATTTCTGCCTGAAACTGTTTCAGGGCGCTGTCGC
CTGGCGCGGTGGGCTCTGCTGTAGCTTCTGCTCCGCGGTGTAGCTCCACA
ACCCGTGACTCTCACAGGATGACCAGGGTATCGGCTTGTAGCTATGGGCA
AGGCCTTCACTTCAAGCCGCACAGCAAGCTCTACCTCTCAGCATTAGACC
AGCTACATCGCATCGCACAATCTCGCTCTCAATCCGATACTTCGCTCTCA
ATCAGGCGAATATGTTGTTGTAACAAGACGCACACATCATAGAGCTTCCC
ACCTCCACCCCGGCCGAAGCCTGTTCGACACTTCACCGCCGTCCCCGCAC
CGTGGAAATGGGGGCCCCGCAAAAGGGGCCCCGCAAAATTACAACAATAA
ACGGGGATTTCCATCCAACCTACCGCTGAACATGAGAACCGGTTATAACC
GGTTGCCGATTATACCCATCCCTGAAAAATAGTATTATCTATGTCAGCAC
GTGGTGGTGGAAATCAAGGAAGCGCAGAGAGAGGAAGGAAGGACCCCCAG
CCCGGATGAAACCGCTCGTTCGTTCGACTGGTGTACGCAAAGCTTGCCGC
TGTTCTGTGTTTGTTGCATCCTACCTCGTGCATTTTGTTGTGTTCGTCTC
TCTGGGCAAGGCAGAGTATGTTTTTTGCGCTCGTTGTGTCACACGTAAGC
GCAGCGGGTCACAGCGAAGAAGAGGTCCGCCGTACTCGACCAACACTCAA
AATTGTACACGAGACGTTTGTATACTTCGTATATCCTGTCGAGAAAAAAA
TAAAGGGGACGCTTGGCATGTTCGAGTACAAGAAAGTATTTTGGGGCACG
CGACTGGACCATGGATGGATTATCTCTTTAGGATTTTTTTTCATCGCTTG
CTGAAAACGAAAATAACATCACACGAAAGCCGAGCGCTTGTTGTCAGAGC
GAGATTAAGCCATAGAGAGAAAAAGAGAGAGAGAATACGCTCTCTGGATG
ATGGTAGTTACTTGTCGTGCGCTTTACGATGCGTCGACCTGCATTGTTGG
ATGGTCTAAATGAATACCTTCCTTTGACATTTTGTTTTCCTAAATACCTT
GCATGAAGTACGTGGTGTTCATTCAGTATATACCTCTCATGGTTGTTTCA
GCTGTCAGACAAGCATGTGATGTCCAAGAGGCAGAACATGTAGGACGACG
TGGGGGTTACGGTACTTTGGGTAGGAAAATATTTTCGAGAGGAGGGTAAC
TTCACTCACGAATACGGGTTCGTCACATACATGAAGGATGCATTTTTTGA
GTCTTCTTCGTCCCTCCGCATCCAAAGTGTGCCGATTTGTTCTCATGGAA
GCTTTCAGCACTAGACTTTTGCTTGGCCCGTATTCGCAAGCGTGAAATAA
GCTAAACTGCCACTGTCCCCCTCGCTTTCATGTCACACCACCAACAGGAA
CCCAACACGGTTTAAACATGGCACACGGATCGTACGAACAGAACGGCGAA
AGTAGTAGCGCCAGCCACTGGCATGGACACGAATTCCGGCACGACGGGTA
TATGAACGCGGAAAAGGACGGCCCTACCGTCGTGGATCGCAAAAGCTGGC
TGCTGGGAGGCGACAACCACCAACATTCCCGTCGTCACCACCATTTCGCC
GTGCCGCCGAGTACCTGCGCTCCCATGCAGGGTATTCCCCCCATGATCCC
G back to topCoding sequence (CDS) from alignment at C-linearis_contig97:144521..152621- >mRNA_C-linearis_contig97.17067.1 ID=mRNA_C-linearis_contig97.17067.1|Name=mRNA_C-linearis_contig97.17067.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at C-linearis_contig97:144521..152621- (Chordaria linearis ClinC8C monoicous)
ATGACCAATCAAGATGACCAATCAAGGAACCCAACACGGTTTAAACATGG
CACACGGATCGTACGAACAGAACGGCGAAAGTAGTAGCGCCAGCCACTGG
CATGGACACGAATTCCGGCACGACGGGTATATGAACGCGGAAAAGGACGG
CCCTACCGTCGTGGATCGCAAAAGCTGGCTGCTGGGAGGCGACAACCACC
AACATTCCCGTCGTCACCACCATTTCGCCGTGCCGCCGAGTACCTGCGCT
CCCATGCAGGGTATTCCCCCCATGATCCCGGAACCCAACACGGTTTAAAC
ATGGCACACGGATCGTACGAACAGAACGGCGAAAGTAGTAGCGCCAGCCA
CTGGCATGGACACGAATTCCGGCACGACGGGTATATGAACGCGGAAAAGG
ACGGCCCTACCGTCGTGGATCGCAAAAGCTGGCTGCTGGGAGGCGACAAC
CACCAACATTCCCGTCGTCACCACCATTTCGCCGTGCCGCCGAGTACCTG
CGCTCCCATGCAGGGTATTCCCCCCATGATCCCG back to top
|