Homology
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Match:
A0A6H5JL08_9PHAE (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL08_9PHAE)
HSP 1 Score: 811 bits (2096), Expect = 1.020e-283
Identity = 449/632 (71.04%), Postives = 486/632 (76.90%), Query Frame = 3
Query: 306 ARSEKDRRAAINMLPNADLSVHTCDSCNKDITGLCFIRCEECKPQEVDLCAACFFGGMEPLGHKKTHSYRVMDKLHKPIFAEDWTAAEELSLADQTRRMGMGAWDEISDSKLFYRRHSAAELNARYLDTYLSQYGSVLPSHYIRHRPDG-GVEKVPVPLTRPDRCSPAFLGVKVNSREVRSRTIAELGTNPRYRYEPSWRAMAEKRRAHKEEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKVNKAKEEEREIREWVEKLPGADLSVYMPLRGDFDHEHDDAAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIERNLLDYKKPPVGGKKRGREDRDLVARLRPFARFSDPKEHDELIDNLLVAKKIRSRIETLQMYRQNGITTLAEGIEFDKARQRRQEELASQKHRESASYLYDGHATAKGGSSTGDRSRRYKDRNKVCGGVSDGHGDGGDEGRNGN-LLELESAPGVDYISADEQRLCSQLHLLPGYYLAIKNAMIQECVKSGCLKKNNLANLSTLDKPRLDKMYDFFSTCGWVTENHRDFEAT--SMNAIPGSPPA 2189
A SEKDRRAAINMLPNADLS HTCDSC+KDITGLC+IRCEECK QEVDLCAACFF GMEPLGHKKTHSYRVMDKL KPIF EDWTAAEELSL DQ ++MG+GAW+EISDSKLFYRRHS++ELNARYLDTYLSQYGSVLP +Y++HRPDG G +KVP+PLT P C P GVKV E T PR YEPSW+A+AEK++ XXXXXXXXXX +KVNKAKEEEREIREW EKLPGADLSVY PLRGDFDHEHDD AEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIE NLLDYKKPP G KKR REDR+LVARLRPFARFS KEHDELIDNL+ AKKIR+RIETLQMYRQNGITT+AEGIEFDKARQRRQEELASQKHRESASYLYDGHA+AKG +TGDR+RRYKDRNK GG+SDG+GD +GRNGN LL++E APGV+Y+S E+ LCSQLHLLPGYYL IKNAMIQECVKSGCLKK+NLA L+TLDKPRLDKMYDFFSTCGWVTE HRDFE + + NAIPGSPPA
Sbjct: 27 AGSEKDRRAAINMLPNADLSNHTCDSCSKDITGLCYIRCEECK-QEVDLCAACFFAGMEPLGHKKTHSYRVMDKLDKPIFTEDWTAAEELSLMDQVKKMGLGAWEEISDSKLFYRRHSSSELNARYLDTYLSQYGSVLPPYYLKHRPDGSGADKVPIPLTHPANCPPNQRGVKVGRVEPGVDHRRASQTTPRL-YEPSWQALAEKQQXXXXXXXXXXXXXXXXXGSGTAAADGTTGTPNGVGGGAVGFPCAGNGAVGGDGAGSATGQQNRSNTKQRRRK--------------------ADKVNKAKEEEREIREWTEKLPGADLSVYAPLRGDFDHEHDDTAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIENNLLDYKKPPPGSKKRSREDRELVARLRPFARFSSAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRESASYLYDGHASAKG--NTGDRNRRYKDRNKG-GGMSDGNGD---DGRNGNNLLDVEGAPGVEYLSPAERALCSQLHLLPGYYLVIKNAMIQECVKSGCLKKSNLAGLATLDKPRLDKMYDFFSTCGWVTEKHRDFEVSGAAANAIPGSPPA 630
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Match:
D7FRV7_ECTSI (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV7_ECTSI)
HSP 1 Score: 664 bits (1712), Expect = 6.450e-226
Identity = 430/623 (69.02%), Postives = 495/623 (79.45%), Query Frame = 3
Query: 342 MLPNAD-LSVHTCDSCNKDITGLCFIRCEECKPQEVDLCAACFFGGMEPLGHKKTHSYRVMDKLHKPIFAEDWTAAEELSLADQTRRMGMGAWDEISDSKLFYRRHSAAELNARYLDTYLSQYGSVLPSHYIRHRPDGGVEKVPVPLTRPDRCSPAFLGVKVNSREVRSRTIAELGTNPRYRYEPSWRAMAEKRRAHKEEA-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKVNKAKEEEREIREWVEKLPGADLSVYMPLRGDFDHEHDDAAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIERNLLDYKKPPVG---GKKRGREDRDLVARLRPFARFSDPKEHDELIDNLLVAKKIRSRIETLQMYRQNGITTLAEGIEFDKARQRRQEELASQKHRESASYLYDGHATAKGGSSTGDRS--RRYKDRNKVCGG-VSDGHGDGGDEGRNGNLLELESAPGVDYISADEQRLCSQLHLLPGYYLAIKNAMIQECVKSGCLKKNNLANLSTLDKPRLDKMYDFFSTCGWVTENHRDFEATSMNAIPGSPP 2186
MLP AD TCDSCNKDI LC+IRC ECK VDLC +CFF G EP HKKTHSYRVMDKLHKPI++E W+A EEL+LAD TR+ G+GAW+EI+D K+FYRR S ELNARYLDTYL+ Y SVLP HY+R R DG VEKVP+P T P+RC P+ GVK++S+EVRSRTIAELGTNPRYRYEPSW+A+A+K+ K A A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +K KEEER I+EW +KLPGADLSV++PLRGDFDHEHD+AAEELLANMEFRPTDHASE+QLKLDVIAVYNHRLDEREKRK+FVIE NLLDYKK G+KR ++DR+L+A+LRP ARFS P +H+ELIDNLL+AKK+R RIE LQ+YRQNGITTLAEG EF+ A+++RQEELAS+KHRESASYLY+G +GGSST ++ R +DRN C DG GDGG E N NLL++ APGV+Y+S E+ LCSQLHLLPGYYL IKNAMIQEC ++GCLKK L +L+ LD PRL+KMYDFFST GWVT+ DF ++ G P
Sbjct: 1 MLPQADPTDGMTCDSCNKDIKFLCYIRCAECK-DVVDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYSEGWSAVEELALADLTRKRGLGAWEEIADLKMFYRRKSEKELNARYLDTYLATYDSVLPPHYLREREDGTVEKVPIPPTHPERCRPSQRGVKLDSKEVRSRTIAELGTNPRYRYEPSWQALAKKQEMAKVAARAAAAASGNVEGSDGTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQSKVKEEERLIKEWADKLPGADLSVFLPLRGDFDHEHDNAAEELLANMEFRPTDHASERQLKLDVIAVYNHRLDEREKRKRFVIEHNLLDYKKQQQNNSAGRKRHKDDRELIAKLRPLARFSTPADHEELIDNLLLAKKMRMRIEQLQVYRQNGITTLAEGAEFEIAKKKRQEELASKKHRESASYLYEG--VGQGGSSTSSKANIRNIRDRNYRCSNRQKDGGGDGGGEANNDNLLDISGAPGVEYLSPAERVLCSQLHLLPGYYLVIKNAMIQECARAGCLKKKRLPDLAVLDTPRLNKMYDFFSTLGWVTDKATDFTPNGSSSTNGGLP 620
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Match:
A0A0P1ATH2_PLAHL (Transcriptional adapter n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATH2_PLAHL)
HSP 1 Score: 226 bits (577), Expect = 3.850e-60
Identity = 132/320 (41.25%), Postives = 201/320 (62.81%), Query Frame = 3
Query: 1251 VEKLPG-----ADLSVYMPLRGDFDHEHDDAAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIERNLLDYKKPPVGGKKRGREDRDLVARLRPFARFSDPKEHDELIDNLLVAKKIRSRIETLQMYRQNGITTLAEGIEFDKARQRRQEELASQKHRESASYLYDGHATAKGGSSTGDRSRRYKDRNKVCGGVSDGHGDGGDEGRNG----NLL----ELESAPGVDYISADEQRLCSQLHLLPGYYLAIKNAMIQECVKSGCLKKNNLANLSTLDKPRLDKMYDFFSTCGWV-TENHRDFEATSMNA 2168
V+ LPG L+ YMPLRGDFD E+D+ AE +LA+MEF TDH +E++LKL VI +YN +L++R +RK FV+ER LLDYK +KR +E+R+L+A+LRPFARF P+EHD ++ L+ A +++ +I LQ YR+NG+ TLAE +D +++R+ + A QK R+SASYLY+ T +S+ DR+ R+++R+ S+ GD R+ N + +E PG ++ E+ LC +L LLP +YL IK+A+++EC + G L K +D + ++YDFF CGWV +EN ++S+ +
Sbjct: 236 VKNLPGEKGGPCQLAGYMPLRGDFDVEYDNEAEMILADMEFSDTDHPTERELKLKVIQIYNQKLEKRNERKNFVVERGLLDYKLHQHTERKRAKEERELIAQLRPFARFQTPEEHDNFVEGLITAMRLKKQILVLQEYRKNGVKTLAEAEVYDAEKKKRELDQAMQKQRDSASYLYESGRT----NSSRDRANRWQNRDHST--SSEAGGDSTKSRRSSASGINAIAASFSIEGTPGCHLLTPKEKELCGKLKLLPKHYLVIKDALVRECYRLGYLTKKMAKETVQIDVNKTGQIYDFFVKCGWVKSENATPTVSSSLQS 549
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Match:
A0A8K1CL78_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL78_PYTOL)
HSP 1 Score: 234 bits (597), Expect = 6.700e-60
Identity = 131/314 (41.72%), Postives = 200/314 (63.69%), Query Frame = 3
Query: 1254 EKLPGADLSVYMPLRGDFDHEHDDAAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIERNLLDYKKPPVGGKKRGREDRDLVARLRPFARFSDPKEHDELIDNLLVAKKIRSRIETLQMYRQNGITTLAEGIEFDKARQRRQEELASQKHRESASYLYDGHATAKGGSSTGDRSRRYKDRNKVCGGVSDGHGDGGDEGRNGNL--LELESAPGVDYISADEQRLCSQLHLLPGYYLAIKNAMIQECVKSGCLKKNNLANLSTLDKPRLDKMYDFFSTCGWVTENHRDFEATSMNAIPGSPPA 2189
E+ G++L+ YMPLRGDFD E+++ AE +LA+MEF DH +E++LKL VI +YN +LDER +RKKFV+ER LLDYKK ++R +++R+++A+LRPFARF PKEH+E ++ L+ A ++R +I LQ YR+NG+ TLAE +D +++R+ E A QK RESASYLY+ GG DR+ R R G GD D+ +++ PG ++ E+ LC +L LLP +YL IK+A+++EC + G L + ++ +D + ++Y+FF CGWV ++ T++ A+P + PA
Sbjct: 246 ERPSGSELAGYMPLRGDFDVEYENEAELILADMEFSEDDHPTERELKLKVIEIYNAKLDERARRKKFVVERGLLDYKKHQQSERRRPKDEREIIAQLRPFARFQSPKEHEEFVNGLITAMRLRKQILLLQEYRKNGVRTLAEAELYDVEKKKRETEQALQKQRESASYLYESARPYSGGR---DRASRLASRGSEANG-----GDSVDDASRSRAAAFDIDGTPGSHLLTPKEKELCVKLKLLPKHYLVIKDALVRECYRLGYLTEQTAKDIVKIDVNKTGQIYEFFVNCGWV---RKEASLTTV-AVPTAKPA 547
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Match:
M4BQH7_HYAAE (Transcriptional adapter n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQH7_HYAAE)
HSP 1 Score: 225 bits (574), Expect = 1.040e-59
Identity = 129/311 (41.48%), Postives = 198/311 (63.67%), Query Frame = 3
Query: 1275 LSVYMPLRGDFDHEHDDAAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIERNLLDYKKPPVGGKKRGREDRDLVARLRPFARFSDPKEHDELIDNLLVAKKIRSRIETLQMYRQNGITTLAEGIEFDKARQRRQEELASQKHRESASYLYDGHATAKGGSSTGDRSRRYKDRNKVCGGVSDGHGDGGDEGRN-----GNL------LELESAPGVDYISADEQRLCSQLHLLPGYYLAIKNAMIQECVKSGCLKKNNLANLSTLDKPRLDKMYDFFSTCGWV-TENHRDFEATSMNAI 2171
L+ YMPLRGDFD E+D+ AE +LA+MEF TDH +E++LKL VI +YN +L++R +RKKFV+ER LLDYK +KR +E+R+L+A++RPFARF P+EHD+ ++ L+ A +++ +I LQ YR+NG+ TLAE +D +++R+ + A QK R+SASYLY+ T S+ DR+ R+ +R ++ G + G D RN G L +E PG +++ E+ +C +L LLP +YL IK+A+++EC + G L K +D + ++YDFF CGWV TE+ + S+ ++
Sbjct: 258 LAGYMPLRGDFDVEYDNEAEVVLADMEFSDTDHPAERELKLKVIQIYNQKLEKRMERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQTPEEHDKFVEGLITAMRLKKQIMLLQEYRKNGVRTLAEAELYDADKKKRELDQAIQKQRDSASYLYESVRTT----SSRDRASRWHNREQIVNGDASG-----DSSRNRASGVGGLKVIATDFSIEGTPGSHLLTSKEKEVCRKLKLLPKHYLVIKDALVRECFRLGYLTKKMAKETVQIDANKTSQVYDFFVKCGWVKTESAITTVSPSLKSV 559
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Match:
A0A3M6VSU8_9STRA (Transcriptional adapter n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSU8_9STRA)
HSP 1 Score: 225 bits (574), Expect = 1.150e-59
Identity = 132/321 (41.12%), Postives = 197/321 (61.37%), Query Frame = 3
Query: 1260 LPG-----ADLSVYMPLRGDFDHEHDDAAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIERNLLDYKKPPVGGKKRGREDRDLVARLRPFARFSDPKEHDELIDNLLVAKKIRSRIETLQMYRQNGITTLAEGIEFDKARQRRQEELASQKHRESASYLYDGHATAKGGSSTGDRSRRYKDRNKVCGGVSDGHGDGGDEGRNGNL-----------LELESAPGVDYISADEQRLCSQLHLLPGYYLAIKNAMIQECVKSGCLKKNNLANLSTLDKPRLDKMYDFFSTCGWV-TENHRDFEATSMNAI 2171
LPG + L+ YMPLRGDFD E+D+ AE +LA+MEF TDH +E+ LKL VI +YN +L++R +RKKFV+ER LLDYK +KR +E+R+L+A++RPFARF PKEHD ++ L+ A +++ +I LQ YR+NG+ TLAE +D +++R + A QK R++ASYLY+ T G DR+ R+++R + G + GG+ RN +E PG ++ E+ LCS+L LLP +YL IK+A+++EC + G L K +D + ++YDFF CGWV +EN + S+ ++
Sbjct: 242 LPGERNGPSQLAGYMPLRGDFDVEYDNEAEVILADMEFSDTDHPTERDLKLKVIHIYNQKLEKRMERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQTPKEHDNFVEGLITAMRLKKQILLLQEYRRNGVRTLAEAELYDADKKKRDLDQAIQKQRDNASYLYESGRTTSGR----DRANRWQNREQGANGET-----GGESLRNRGAGASDLNAIAATFSIEGTPGCHLLTPKEKELCSKLKLLPKHYLVIKDALVRECFRLGYLTKKMAKETVQIDVNKTGQIYDFFVRCGWVKSENATTTVSPSLKSL 553
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Match:
H3GUB3_PHYRM (Transcriptional adapter n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUB3_PHYRM)
HSP 1 Score: 224 bits (570), Expect = 2.720e-59
Identity = 125/291 (42.96%), Postives = 186/291 (63.92%), Query Frame = 3
Query: 1275 LSVYMPLRGDFDHEHDDAAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIERNLLDYKKPPVGGKKRGREDRDLVARLRPFARFSDPKEHDELIDNLLVAKKIRSRIETLQMYRQNGITTLAEGIEFDKARQRRQEELASQKHRESASYLYDGHATAKGGSSTGDRSRRYKDRNKVCGGVSDGHGDGGDEGRNGNLLE-------LESAPGVDYISADEQRLCSQLHLLPGYYLAIKNAMIQECVKSGCLKKNNLANLSTLDKPRLDKMYDFFSTCGWV 2126
L+ YMPLRGDFD E+D+ AE ++A+MEF DH +E++LKL VI +YN +L R +RKKFV+ER LLDYK +KR +E+R+L+A++RPFARF P+EH++ ++ L+ A +++ +I LQ YR+NG+ TLAE +D +++R+ + A QK RESASYLY+ T+ G DR+ R+++R + G + GGD R N L +E PG ++ E+ LC +L LLP +YL IK+A+++EC + G L K +D + ++YDFF CGWV
Sbjct: 248 LAGYMPLRGDFDVEYDNEAEVIMADMEFSDADHPAERELKLKVIQIYNQKLANRIERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQTPEEHEKFVEGLIAAMRLKKQILLLQEYRKNGVRTLAEAELYDAEKKKRELDQAIQKQRESASYLYESGRTSSSGR---DRANRWQNREQGVNGDA-----GGDSSRTRNGLNAIAATFSIEGTPGCHLLTPKEKELCCKLKLLPKHYLVIKDALVRECFRLGYLTKKMAKETVQIDVSKTGQVYDFFVKCGWV 530
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Match:
A0A7S2H024_9STRA (Transcriptional adapter n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H024_9STRA)
HSP 1 Score: 223 bits (568), Expect = 3.400e-59
Identity = 133/319 (41.69%), Postives = 190/319 (59.56%), Query Frame = 3
Query: 1239 IREWVEKLPGADLSVYMPLRGDFDHEHDDAAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIERNLLDYKKPPVGGKKRGREDRDLVARLRPFARFSDPKEHDELIDNLLVAKKIRSRIETLQMYRQNGITTLAEGIEFDKARQRRQEELASQKHRESASYLYDGHATAKGGSSTGDRSRRYK----------DRNK---------VCGGVSDGHG---DGGDEGRNGNLLELESAPGVDYISADEQRLCSQLHLLPGYYLAIKNAMIQECVKSGCLKKNNLANLSTLDKPRLDKMYDFFSTCGWVT 2129
I+E + KLPGA L+ YMPLRGDFD EH++ AE +LA+MEF P + A+E+ LKL V+ +YN +LDERE+RK+FV ER LLDYKK ++R +++RDL+ R+R FARF +EH+ + LL AK++R RI+ LQ YRQ GI TL EG E++ R++R E+A ++ ++ YL D A+ S G R R DRN+ V G DG +G DE G + APG D +S E LC L LLP YY +K+A+++E ++ G L L + + ++++DFF +CGW+T
Sbjct: 235 IQEKISKLPGASLTGYMPLRGDFDVEHENDAEVILADMEFSPMESAAERGLKLAVLQIYNAKLDERERRKRFVTERGLLDYKKQQNCDRRRPKDERDLIGRMRLFARFHSAEEHENFLQGLLTAKRLRKRIQQLQHYRQMGIRTLKEGEEYESPRRKRHAEMALRRDQQRNGYLLDRSHDARAQHSRGRRRRESNHDSAQEKPEDDRNRKVINRSDKVVVGSSGDGTSANVNGSDEATAG---AIRKAPGADLLSDGELELCVSLGLLPKYYAVVKDALLRESMRLGYLTPKRAHQLVKVQVTKTERLFDFFVSCGWIT 550
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Match:
F0WRK6_9STRA (Transcriptional adapter n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WRK6_9STRA)
HSP 1 Score: 223 bits (569), Expect = 3.710e-59
Identity = 128/309 (41.42%), Postives = 194/309 (62.78%), Query Frame = 3
Query: 1251 VEKLPGADLSVYMPLRGDFDHEHDDAAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIERNLLDYKKPPVGGKKRGREDRDLVARLRPFARFSDPKEHDELIDNLLVAKKIRSRIETLQMYRQNGITTLAEGIEFDKARQRRQEELASQKHRESASYLYDGHATAKGGSSTGDRSRRYKDRNKVCGGVSDGHGD----------GGDEGRNGNLLE-------LESAPGVDYISADEQRLCSQLHLLPGYYLAIKNAMIQECVKSGCLKKNNLANLSTLDKPRLDKMYDFFSTCGWV 2126
V+++ G +L+ YMPLRGDFD E+D+ AE +L++MEF D +E++LKL VI +YN +LDER +RK+FVIE LLDYKK ++R +E+R+++A++RPFARF +EH++LI L+ A +++ +I LQ YR+NGI TLAE +++ +++R+ ELA QK R+ ASYLYD T G DR+ RY++R G+ D G G NG + ++ APG ++ E+ LCS+L +LP +YL IK+ +I+EC + G L + + LD + + +YDFF +CGWV
Sbjct: 243 VKQMVGTELAGYMPLRGDFDVEYDNDAEVILSDMEFAEDDTPTERELKLKVIEIYNSKLDERARRKQFVIEHGLLDYKKHQQTERRRPKEEREIIAQMRPFARFHTREEHEDLIQGLITAMRLQKQIVLLQEYRRNGIKTLAEAEMYEQEKKKRETELAMQKQRDDASYLYDSTRTNSNGK---DRASRYRER---LTGLHDDEGSDTSSNKRPRTGDSSEDNGRGVSKRIATSLVDGAPGAHLLAPTEKELCSKLQILPKHYLVIKDVLIRECYRLGYLTPDTARQIVKLDVEKSEDIYDFFVSCGWV 545
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Match:
G5AGF3_PHYSP (Transcriptional adapter n=3 Tax=Phytophthora TaxID=4783 RepID=G5AGF3_PHYSP)
HSP 1 Score: 223 bits (567), Expect = 4.080e-59
Identity = 128/312 (41.03%), Postives = 194/312 (62.18%), Query Frame = 3
Query: 1275 LSVYMPLRGDFDHEHDDAAEELLANMEFRPTDHASEKQLKLDVIAVYNHRLDEREKRKKFVIERNLLDYKKPPVGGKKRGREDRDLVARLRPFARFSDPKEHDELIDNLLVAKKIRSRIETLQMYRQNGITTLAEGIEFDKARQRRQEELASQKHRESASYLYDGHATAKGGSSTGDRSRRYKDRNKVCGGVSDGHGDGGDEGRNGNLLE-------------LESAPGVDYISADEQRLCSQLHLLPGYYLAIKNAMIQECVKSGCLKKNNLANLSTLDKPRLDKMYDFFSTCGWV-TENHRDFEATSMNA 2168
L+ YMPLRGDFD E+D+ AE +LA+MEF DH +E++LKL VI +YN +L++R +RKKFV+ER LLDYK +KR +E+R+L+A++RPFARF P+EHD ++ L+ A +++ +I LQ YR+NG+ TLAE +D +++R+ + A QK R+SASYLY+ T+ G DR+ R+++R++ G + GGD R +E PG ++ E+ LCS+L LLP +YL IK+A+++EC + G L K +D + ++YDFF CGWV +EN + S+ +
Sbjct: 203 LAGYMPLRGDFDVEYDNEAEMILADMEFSEGDHPAERELKLKVIQIYNQKLEKRIERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQSPEEHDNFVEGLIAAMRLKKQILLLQEYRKNGVRTLAEAELYDADKKKRELDQAIQKQRDSASYLYESGRTSSSGR---DRANRWQNRDQGANGDA-----GGDNSRTRGAASGAAGLNAIAATYSVEGTPGCHLLTPKEKELCSKLKLLPKHYLVIKDALVRECFRLGYLTKKMAKETVQIDVNKTGQVYDFFVKCGWVKSENATPTVSASLKS 506
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17041.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.02e-283 / Id = 71.04 Expect = 6.45e-226 / Id = 69.02 Expect = 3.85e-60 / Id = 41.25 Expect = 6.70e-60 / Id = 41.72 Expect = 1.04e-59 / Id = 41.48 Expect = 1.15e-59 / Id = 41.12 Expect = 2.72e-59 / Id = 42.96 Expect = 3.40e-59 / Id = 41.69 Expect = 3.71e-59 / Id = 41.42 Expect = 4.08e-59 / Id = 41.03 Sequence A0A6H5JL08_9PHAE D7FRV7_ECTSI A0A0P1ATH2_PLAHL A0A8K1CL78_PYTOL M4BQH7_HYAAE A0A3M6VSU8_9STRA H3GUB3_PHYRM A0A7S2H024_9STRA F0WRK6_9STRA G5AGF3_PHYSP Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 823.9 Seed ortholog evalue 5.1e-236 Seed eggNOG ortholog 2880.D7G4A5 Preferred name TADA2A KEGG rclass RC00505,RC00738,RC02795 KEGG ko ko:K00457,ko:K03012,ko:K10391,ko:K11314 KEGG Reaction R00435,R00441,R00442,R00443,R01372,R02521 KEGG Pathway ko00130,ko00230,ko00240,ko00350,ko00360,ko01100,ko03020,ko05016,ko05169,map00130,map00230,map00240,map00350,map00360,map01100,map03020,map05016,map05169 KEGG Module M00044,M00180 Hectar predicted targeting category other localisation GOs GO:0000018,GO:0000123,GO:0000124,GO:0000125,GO:0000183,GO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000785,GO:0000790,GO:0000981,GO:0001786,GO:0001932,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003700,GO:0003712,GO:0003713,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005671,GO:0005694,GO:0005819,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006325,GO:0006338,GO:0006342,GO:0006348,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0006974,GO:0006996,GO:0007049,GO:0007155,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009059,GO:0009266,GO:0009299,GO:0009405,GO:0009409,GO:0009628,GO:0009631,GO:0009719,GO:0009725,GO:0009733,GO:0009735,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010520,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010810,GO:0010811,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0022610,GO:0030155,GO:0030447,GO:0031056,GO:0031058,GO:0031063,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031505,GO:0031589,GO:0031647,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032502,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035065,GO:0035066,GO:0035327,GO:0035690,GO:0036211,GO:0040007,GO:0040020,GO:0040029,GO:0042127,GO:0042221,GO:0042325,GO:0042493,GO:0042710,GO:0042789,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043565,GO:0043708,GO:0043709,GO:0043900,GO:0043902,GO:0043966,GO:0043967,GO:0044010,GO:0044111,GO:0044114,GO:0044115,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044764,GO:0045229,GO:0045785,GO:0045814,GO:0045892,GO:0045934,GO:0045935,GO:0046483,GO:0046695,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051445,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0060255,GO:0060631,GO:0065007,GO:0065008,GO:0070013,GO:0070461,GO:0070887,GO:0071214,GO:0071470,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0072341,GO:0072686,GO:0080090,GO:0090043,GO:0090304,GO:0090311,GO:0090605,GO:0090609,GO:0097159,GO:0097659,GO:0104004,GO:0140110,GO:1900187,GO:1900189,GO:1900190,GO:1900192,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901983,GO:1901985,GO:1902275,GO:1902493,GO:1902494,GO:1902562,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905269,GO:1905368,GO:1990234,GO:1990414,GO:2000112,GO:2000113,GO:2000241,GO:2000756,GO:2000758,GO:2001141,GO:2001252 EggNOG free text desc. positive regulation of histone acetylation EggNOG OGs COG5114@1,KOG0457@2759 Ec32 ortholog description Transcriptional adapter 2-alpha Ec32 ortholog Ec-02_001950.1 EC 1.13.11.27 COG Functional cat. B Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03036,ko03400,ko04147,ko04812 Exons 14 Model size 3016 Cds size 1941 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930824.8412366-UTR-C-linearis_contig96:427010..427834 1622930824.8412366-UTR-C-linearis_contig96:427010..427834 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 427011..427834 - 1690881269.1482832-UTR-C-linearis_contig96:427010..427834 1690881269.1482832-UTR-C-linearis_contig96:427010..427834 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 427011..427834 - 1622930825.127573-UTR-C-linearis_contig96:437007..437258 1622930825.127573-UTR-C-linearis_contig96:437007..437258 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 437008..437258 - 1690881269.3209896-UTR-C-linearis_contig96:437007..437258 1690881269.3209896-UTR-C-linearis_contig96:437007..437258 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 437008..437258 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930824.857308-CDS-C-linearis_contig96:427834..427933 1622930824.857308-CDS-C-linearis_contig96:427834..427933 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 427835..427933 - 1690881269.1755385-CDS-C-linearis_contig96:427834..427933 1690881269.1755385-CDS-C-linearis_contig96:427834..427933 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 427835..427933 - 1622930824.8727129-CDS-C-linearis_contig96:428315..428408 1622930824.8727129-CDS-C-linearis_contig96:428315..428408 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 428316..428408 - 1690881269.1857684-CDS-C-linearis_contig96:428315..428408 1690881269.1857684-CDS-C-linearis_contig96:428315..428408 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 428316..428408 - 1622930824.8898373-CDS-C-linearis_contig96:429213..429372 1622930824.8898373-CDS-C-linearis_contig96:429213..429372 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 429214..429372 - 1690881269.1952639-CDS-C-linearis_contig96:429213..429372 1690881269.1952639-CDS-C-linearis_contig96:429213..429372 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 429214..429372 - 1622930824.908898-CDS-C-linearis_contig96:429852..429972 1622930824.908898-CDS-C-linearis_contig96:429852..429972 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 429853..429972 - 1690881269.2053325-CDS-C-linearis_contig96:429852..429972 1690881269.2053325-CDS-C-linearis_contig96:429852..429972 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 429853..429972 - 1622930824.9267964-CDS-C-linearis_contig96:430371..430471 1622930824.9267964-CDS-C-linearis_contig96:430371..430471 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 430372..430471 - 1690881269.2152822-CDS-C-linearis_contig96:430371..430471 1690881269.2152822-CDS-C-linearis_contig96:430371..430471 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 430372..430471 - 1622930824.964024-CDS-C-linearis_contig96:431014..431118 1622930824.964024-CDS-C-linearis_contig96:431014..431118 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 431015..431118 - 1690881269.2254617-CDS-C-linearis_contig96:431014..431118 1690881269.2254617-CDS-C-linearis_contig96:431014..431118 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 431015..431118 - 1622930824.9787529-CDS-C-linearis_contig96:432386..432566 1622930824.9787529-CDS-C-linearis_contig96:432386..432566 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 432387..432566 - 1690881269.2351122-CDS-C-linearis_contig96:432386..432566 1690881269.2351122-CDS-C-linearis_contig96:432386..432566 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 432387..432566 - 1622930824.9969783-CDS-C-linearis_contig96:433096..433225 1622930824.9969783-CDS-C-linearis_contig96:433096..433225 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 433097..433225 - 1690881269.2455385-CDS-C-linearis_contig96:433096..433225 1690881269.2455385-CDS-C-linearis_contig96:433096..433225 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 433097..433225 - 1622930825.0136309-CDS-C-linearis_contig96:433678..434003 1622930825.0136309-CDS-C-linearis_contig96:433678..434003 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 433679..434003 - 1690881269.263081-CDS-C-linearis_contig96:433678..434003 1690881269.263081-CDS-C-linearis_contig96:433678..434003 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 433679..434003 - 1622930825.031434-CDS-C-linearis_contig96:434342..434404 1622930825.031434-CDS-C-linearis_contig96:434342..434404 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 434343..434404 - 1690881269.2727864-CDS-C-linearis_contig96:434342..434404 1690881269.2727864-CDS-C-linearis_contig96:434342..434404 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 434343..434404 - 1622930825.0512264-CDS-C-linearis_contig96:434680..434866 1622930825.0512264-CDS-C-linearis_contig96:434680..434866 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 434681..434866 - 1690881269.2839181-CDS-C-linearis_contig96:434680..434866 1690881269.2839181-CDS-C-linearis_contig96:434680..434866 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 434681..434866 - 1622930825.0697076-CDS-C-linearis_contig96:435265..435351 1622930825.0697076-CDS-C-linearis_contig96:435265..435351 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 435266..435351 - 1690881269.2933607-CDS-C-linearis_contig96:435265..435351 1690881269.2933607-CDS-C-linearis_contig96:435265..435351 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 435266..435351 - 1622930825.0885632-CDS-C-linearis_contig96:435829..435974 1622930825.0885632-CDS-C-linearis_contig96:435829..435974 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 435830..435974 - 1690881269.3026962-CDS-C-linearis_contig96:435829..435974 1690881269.3026962-CDS-C-linearis_contig96:435829..435974 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 435830..435974 - 1622930825.111179-CDS-C-linearis_contig96:436854..437007 1622930825.111179-CDS-C-linearis_contig96:436854..437007 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 436855..437007 - 1690881269.3117166-CDS-C-linearis_contig96:436854..437007 1690881269.3117166-CDS-C-linearis_contig96:436854..437007 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 436855..437007 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17041.1
>prot_C-linearis_contig96.17041.1 ID=prot_C-linearis_contig96.17041.1|Name=mRNA_C-linearis_contig96.17041.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=647bp
MAHYGNGIHNGQHAVEGHARSEKDRRAAINMLPNADLSVHTCDSCNKDIT back to top mRNA from alignment at C-linearis_contig96:427011..437258-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig96.17041.1 ID=mRNA_C-linearis_contig96.17041.1|Name=mRNA_C-linearis_contig96.17041.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10248bp|location=Sequence derived from alignment at C-linearis_contig96:427011..437258- (Chordaria linearis ClinC8C monoicous)CTACTATGGGTATGACTAGGTTAAGTCTTTTTTAATAGGTCATAGCCATA
GCTTCGCTATTTCTTTGCTCTCAACCACGAGGACCAGAGGTATCGCTACC
GCATCGGATCGACGGATCTGCCTTACTGTCCCAGTGATCTGGCCTCAAAA
TAGCGTAAGGCTTAGACCACGCCTCCACGGCAAGAGGTAAAGGTCGAGCC
GCTGGGAGCCGGAAAAACCACCCCGCGAGACAGATTTACTTCGAGAGAGC
C ATGGCTCATTATGGGAATGGCATTCACAATGGGCAGCACGCCGTGGAAG
GGCACGCTCGGAGTGAGAAGGACAGGAGAGCGGCCATCAACATGCTGCCG
AACGCTGACCTCTCGGTCCATACCTGCGACTCGTGCAACAAAGATATCAC
TGGG GTGAGAGTGAGAGGAAGCCTTGTCGAGTAAAATGTGTTGTACATAC
CTAGGACCACCGTCGCTGTTCGAGAGGCACACAGGCGGGCAGGAGAGGGA
GAGTGTTTCACGATGTGTGGTAGCAGATGAGGAGGGTCCATGCTAATCGA
GGAGAGCTTGGGTTCGATACTAACTCGAGAGAGAGAGCTGATGGTTTTTG
CAGATTAGCTAGACTACTGCTGTTAACAAAAATGACAGCCCGCAGCTCGC
CTTTTGTCGCGCACATCACGAGCGAGGTTAGCACGCCGTACATGACGCCT
GAGATACGTACACCGCGGCCCAGCTACATGTAGGGTACCTGCAGGGGAAA
GTAAAGAGTGCACCGAAGCGTAGGGAGTGTGTTCTCGGAAAGGGTAATAA
AAGCAGCCGAGGCCATCCAGGTGCAATAGGCACTCTATCCTGGGGGGTCC
ATGAGGCCGGGAGTATTGTTCTGGGGGTGTTGGTTTTAGGGTTCGGGCGG
ATCGATGGCTTGTGCTGTAAAGGAAGCGATAGCAGTGTGGCATTGCGGTA
TCCGTTATCTTCCCGTTCGACCACCGTTCCGCACGTGGTTGTTGTCGCTT
CCCCCTTCATCTCAAATCCCAGCCCCGATGATTATGTACACCCCATTGGC
GCCCGCGCGGCCGACGGTGTCCGCTGTCGCATCGCCGATGACCACATGCC
GCGGTTGACGATCCGACCAGTAAAGAGGGCCTCCCCGCGAGCAGCGTGTC
TTGCCTTGTACGTGTGCGGAGAAACGGCACACAGAAACGACGAACCCGGC
CGCGCTGCGTACTAACGTGTGTGTGCCCTCCGCCAATCACACGGCCTGAC
TGGACTGGACTGGACTGGACTCGACACAAAACAGCTGTGCTTCATCCGGT
GCGAGGAGTGCAAGCCCCAGGAGGTGGACCTCTGCGCCGCCTGCTTCTTT
GGAGGCATGGAGCCCTTGGGGCACAAAAAGACGCACAGCTACCGCGTCAT
GGACAAGCTCCACAAGCCCATTTTCGCTG GTGAGCCAGCCCCCTACTTCG
CCCCCGCCTGCCCACCGCTCACCCCCCCAAGTCCGTACGACAGCACTACT
CCCTTTCACCTCGGCTCCGGCTGTTGTTGTATGCGTGCAAAGGGTCAGAT
GATGAAGTCAAGGAACGAATAAAGTACGCCCCAACGGGAGCAGCTCCCTT
CCTTCAATCGTTTACCTTGCTCTGTCAGCCCTGGTTGGAACCAAAACATG
CCGTCCGCCTAGGGTTGGGGTTAGGGTTAGGGTAAGGGTTGGGGTCAGAT
GCCGACCCGGGAAATAGCCATGGAGCAATCTCTCATGAGTGGACAAGACA
GCGGTCCAACACACACCGTCCAACAGCAGCAGCAGCACTTCCAGCACGCT
TCGGTTGACGCGGTTCCGTCTGGCCTGCGTCTGCCCTCTGGTGTGCTACC
CTTACCATCGTTGCCATCGCCCTCTTGTCGTCATTCTTGTGTCTGTTATT
GATGCAGAGGACTGGACCGCGGCGGAAGAACTGTCTCTGGCCGACCAGAC
GCGGAGGATGGGCATGGGGGCGTGGGATGAGATCAGCGACTCG GTGAGTG
CATCACGCATGAAGTGAAGTTCGGGGGGCACGACTACGGCGAAACCTGCC
TTCCGTTTGTTTCCTCTTGTTTCCTCGGCTGGTGTTGTGGCTGCCCGCCA
TTTTCGTCGTACATGAACGAAATTGTGCCCATTGCACCCAGCTTGCTCTG
CAGAGACTGTTTTTTTTTTCTGGCGTTCATGGGGAAGGTTAAAAGCTAAA
AGCAGTGTCGTACATCAAAGGCGTGGTTCCCAAGAGGAACCCCGCGACTG
CTCGAAACCCACCTTGTACGTACCCTGAGCATCTTCCCCCACCCTCACCC
GCTTCCCCGCCGTCTCCCTGCCCCTTTTTTTCTCTCTCGCCAAACAAAAC
GTGAACGCCACACAAACGGCCACCGGCCGACACTCCGAGCAGAAGTTGTT
TTACCGCCGACACTCCGCCGCGGAGCTGAACGCCCGCTACCTCGACACGT
ACCTGTCCCAGTACGGGTCCGTTCTCCCGTCGCACTACATCAGGCACCGC
CCGGACGGGGGCGTGGAGAAGGTGCCCGTCCCCCTCACGCGCCCGGACAG
GTGCTCTCCGGCTTTCCTCGGGGTTAAG GTGAGACTATCATACGGACAAG
ATAATTTCGTGTTAAGATTAGATGAAGGTCAAGTAGGGTCTAGGTGAGAC
CAATAGATAGCAAGATACACTTACATGAGAGACACGAGAGAGTTTAATTT
AAGGTGAGATGACGCGATTTGTGTGCACCACTGCTGCAGTCTCTGGTGCA
GCGAGGGAGGGTAAGAGTACCTGCAAAGCCCCCCACGGAACGACTTTTTT
TCATGAGGCAAGGCAAGATGACATGCGCGTCGCTGCACACCTGGACACGC
ACAGGTGAACTCGCGGGAGGTCCGCAGCCGCACGATCGCGGAGCTGGGCA
CCAACCCCCGTTACAG GTGCGGAGGGTTTGTTGTGGGTTAGGGTTAGTGC
GGTTAAGGTTAACACCCGATAGGGCCCGAGCAACCCCCTCCACCAGTGCT
TGTGCTTGCGCTCGTGCTGTCACCCTCCTTGTCTTCGGCTCGGCTGTGGG
AGGGGTTCCAACGCGTGTCGACGAGGGCGCGCTACGGGGTCTATTACGCC
CCTAAACCATAGACCGCTACTTCCGAGAGCATGTCGGCGACAAACGTAGT
AACGACGCCAAGAGCATACCAACAACACCAGCGGTTCTTGAAAGACCAAC
GACGAGAACACCAGCAGCATCAACAGAACAACACCGCTGTGCATACATGC
AACAGGTACGAGCCCTCCTGGCGAGCCATGGCGGAGAAACGAAGGGCCCA
CAAGGAGGAGGCCGCCGCCGCAGCAGCCGCCGCCGCTGGCATCCAGATGG
CGAACGGCACCGGCACCGCTGCTGCTAACGGCTCTGCTGCTACCTCGCAC
GGCACGTCCGGGGCGGGGGCAGGCGGTGGTGCTGCCGCCGCCCCGTCGGG
CGGGGGTGATGGTGTCGGAGCCGGCGGGGATGCCGCTGCCGTCGCGGGGG
CGGGGGCGGGGGCGGGGGCGGCGGTGGTGCAGCAGAACCGGTCCAACACG
AAGCAGAAGAAGCGGCAGAGGACGGAGAAG GTGCGCGGGGCGGTGCCGGG
CTTTCGTTCTTTGGTGTCGTTGTCGTTGTCGTTGTCGTTGCCGTTGTCGT
TGCCGTTGCCGTTGCCGTTGCCGTTGTCGTTGTGTTGACGTGTTGGTTTT
GTAATTGGTGATTACGGTGCTGGTTGTTGTTGTTGGTGCCTTGGCGTCAA
GCTCCGCCGTCCTAAAAATCTGCGACCCAGCCGTTATGATGTACAGTACC
GCCACCGCCCCGTTCCGTAATGTGGCAATCAGCAGCACTTCCAGCACTTG
TCCAACCCCAGATGGACGCGTGACAGCCCTACTCCTTCCCTACAATCTCC
GTTGAGATGTTCCTGAAGCCCCCGAAGACCGCCACCGACCAAAGCCACTT
CAGTTCCGTCCAGCAATGCCCACTGCTCGTGGCGTAACCAGACGTAGCCC
TAACCCCAACCCCCTAATCCCCAACCCGGAAAGGTGAACAAGGCAAAGGA
GGAGGAGCGGGAGATCCGCGAGTGGGTGGAGAAGCTACCTGGGGCGGACC
TGTCGGTGTACATGCCCCTCCGCGGAGACTTCGACCACGAGCACGACGAC
GCCGCCGAGGAG GTACGACTACACGATATCCTACCATAGCATAGCATAGC
ATAGCGTAGCATAGCAAAGCACAGCATTTGGGCGACAAGAGAACAAGCCA
GGCAGATCTACGCAGATCTACGCAGATCTACGCAGATCTACCTCCCGCTG
GTGTGTGTGATGTCTGACCTTGACGCGATTTGTTTAAAAACAAGCCCAAC
TGTCTTTTGGCTTTGGAGGCGAGGCGAGGGGAGGGACGCCGTTTTGTCAA
GTCAAGGTGTCCCCGGGTGCCTAAGGGAGCTACGGCAGTCTAACAATTGG
CTTTGTGTATCTAGGGTTACTGCGAGGTAAATTTATCAGCGAATGACCGT
GCACACGCTGCTTGCCTCTTCACGACCCCCCCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTGTGTGTCTCTCTGTCTCTCTGTCTCTCTGTCTCTC
TGTCTGTCTCTCTCTCTGTCTGTCTCTCTGTCTGCCTCTCGTTTTTGTTT
TCGGTTCTCCGTTTGTTTTATGGCATACTTTTGAAAACCCAGCTGCTAGC
GAACATGGAGTTCCGCCCCACGGACCACGCGAGCGAAAAGCAGCTGAAGC
TGGACGTGATCGCGGTGTACAACCACCGTCTCGACGAGCGCGAGAAGCGC
AAGAAGTTCGTCATCGAGCGCAACCTGCTGGACTACAAGAAGCCGCCGGT
GGGCGGCAAGAAGCGTGGCAGG GTGAGCAAAACACAGGAGACCGCACAGC
TGACAGTACACGGAAAGGAAAGTGGGTTAGTGTAGAACCAGCTTGTGCTT
GTAGCTGCTGTGGATATGTTCTAATAAAAGTTCGCACGGGCACAGACTAT
CGATCGAAAGTGGTCGCGTCTGCTGCTGCTGCTGCTGCTGCTGCTGTTTG
CTATTGTTTGCTGTTGTGGTTGTTTCGCACGAGGATGAAGATAGGCTCGC
TTCCTTGAGGGGACGGTGAGGGGTATACTAAAACCAGTATATGCCTTTTC
GGAGCAAATATCGTACCCCCCGGCTGAGCTTCACGCAGCCTCACTTGAAA
TTTGTGTAGGATTTCAAAAAAACGGACGCTTTTGCGGCCTTGTCAGAGGT
ATTCCGAGATTTCCCAGAGGTGTTGCGAGATTTCCAGCTCTTTTTTGTGG
AAAACGCGGTGTACTTGGCTTCATTTTTTAACCACCCTTTGCGCGAAAAA
ACTTTGAAGGGCTGTATGTGATTTTCTGCTGACAATGTCCTGGGGTATTT
TATCTGCTCCTGTCACAATCGGGCTACATTCGCGTCCAGTCCGTTTTTTG
ATTGGGGCAGAAACCACGGTGTGAGGCTCGGGGGCGTTGATCCAAATATT
CGCCGCTTTGGACCAAAAAAGAGCGGTTGAAAAACTCGTTCGTGCTCACG
AAAATCTCTCAAGCGTGGCTGCTAGCTATCTGCTGCTGCTGTCGACGACA
TGCGACGGCTCCTACACACCATATCAGTAGGCCCTGCTAGCGGCTTGCGC
CTGTTCGTGCTCGTGAGAGCCTCGCTCGATGACTTTGTGAACACTAAGCG
CTCGGTCAGATGGGCATTTGACAGTCTTTTCAAAAGAGCGACTTTTCCTC
AGTTTTTAAGCAAAAGCTCCGCGTTCCCGCACCTTCAAACTCTGGACACA
CTCCTTTCTGTATAGAAAGGCAAACTGTTGCATATGAAATACTCGAGGGT
ATATACAGCAGCACGCTTAAGGGTCGAACTGGAAAAGCGTGTCTTGGGAG
CTTTCTGGAGGGCCCCGTGTGGTCATTTTCACATACCCAAAGAAAATAGG
CACACAAAAAATCAATCGTTCGTGTGTTTCACTGAGCCCCAAGAACCACT
ACATCTGCGACCCCCCCCCCCCTTGCGGACGCCTTAACCAACCGTGCCGT
GCAATCGGGCGCCGGAACGGTATCTGAAATTTGCCGCTGCATTTTTTTGC
TGCACTGCTGCTCTGGGCTGCGGTGTGTGTCTGCCTGCAGGAGGACCGTG
ACCTGGTGGCTAGACTCCGGCCGTTTGCTCGTTTCAGCGACCCCAAGGAG
CACGACGAGCTCATCGACAACCTCCTCGTCGCCAAGAAGATACG GTAAGC
CGTCAAAGAAGATACGGCAAGCCGTCAAGAGGTTTTGTCCTCTGTCCGCC
TGCCTGTCTCAGGGAAGCTTTCGTTTACCGTGCCTTGCTTTTTTTGTGTT
GTATTTTTTGTGTTGTGCCGTGGAACAAAAGTGACGCCAAGCTGATGATT
GTATTTTGATGATTGTGTTTGGATTTGATGTGTCTCCCTTTCATCGGCTT
CCCTTTCCGTGTCTTTTGTTGTGTCTTGTGTTGTGTTGTGTTGTGGGTGC
CTTTGCTCGCCTTGAGCCTTGAGCCTCTCTCTGTCGTTAGTTGGTACCAT
TCCCGTTGTTGGGTTGATTTAATCATGGTAAAACCCCGATGAATGAGTGC
TGAGTGCAGCCATAGTGGGCACCTGTGGCTGGTGCGAAGACACAGCCTCC
CTCACTCCGATATTCGAACGCTTGCTGTGTGCTGTCCATAGGTAGAAGTT
GAGTTGATCGAACTTGCGACTTGTTTCACCCGCTCCCCGCCTTCGCCGTC
TTTAAATGTCGTATGTTACAATACCGTTTGTGCGCAGGAGTCGAATCGAA
ACGCTTCAGATGTACCGTCAGAACGGCATCACCACCCTGGCGGAGGGCAT
CGAGTTCGACAAAGCTCGCCAGAGGCGTCAAGAAGAG GTATTCGTGTGTG
TGTATATACGTGGGCGTCGGAAATAAAAGTCGGAACGCTGACCCGCCCCC
TCATGCCACTCTTGCAGCAGCACGGGCGAGCTTGGTGTAATACAAGTAGT
GGCGAGTTTTTCCCCTTGAGCAAGTCAGCATGGGCATGAGTGTTGTGGCT
TTGGTTCTCCCGTTCTGTCTTTTGTTCTCCGGCCAACAGGCCAAGAACCA
GCTATTGTCGTGTTTGCTCTGATGGGGGCGACAGGACTCAAATGTGATCC
GTGTTGTACCACGTAATAAATACCTGATTCCATACCCCAGGAAATTAACA
CCCAGAGACGAGTCAATGGTATTCTCGCGGCACTCGCAGGGATTCATCCG
TGGTACTCGTCCCATTTGTTCCCCCATTTTTCGCAGCTGGCTTCCCAGAA
GCACCGCGAGTCTGCCTCGTATCTGTACGATGGACACGCCACCGCTAAGG
GAGGCAGCAGCACCGGCGATCGCAGCAGGCGCTACAAGGACAGGAACAAG
GTGTGT GTTGTGTTATGTCGACCTTGCACGTTTTTTTTGTCTACACGCTG
CTGTGCGTGTCCCTTCGTTTTCAGTTTCTGTTGTTCATCAAAACATCAAA
ATATCAAAACGGCATCAAAGAAAGAACCTCCCATCAAAGAGACGAATCCC
TAAGAGGTGGGTTAACAGTTCAATACAGCTAGTAGTGACGTATCATGGGG
ATATTTTCGTAGATGGAGAACAAAAACACCTAAAACCGGGAAAAAACATT
TTCCAAATTGTGTTGAGCGGTGTGCCGGACGGCAGACGCCGGCAGCTGCC
CTCCCCTGCCTTCGCTCCCGCTCGCTACCTTTTCTTCGACGTTTTGCTTC
ACGTGTTTCTCCATACGTGGATGTGTGTGTGGCGTGGTTGGTTGCCGCGC
ACTTCTTGTCGGTTAAACTTCTTCGTTTTCTTTTTGTTGTTGTCGCGTTT
TCTGTCTTTTTTGTTTGTCGTGTGGTGTCATGTCAGGGCGGCGTGTCGGA
CGGGCACGGGGACGGGGGCGACGAGGGCCGTAACGGCAACCTCCTAGAGT
TAGAGAGCGCCCCGGGCGTGGACTACATCTCGGCCGATGAGCAGCGCCTG
TGCTCGCAGCTGCACCTGCTGCCTGGGTATTACCTCGCCATCAAG GTACG
CTGCTGCTGCTGCTGCTTCGCCGAGATGCTTGCTTCGCCGCCTACCTTCG
GCTTTGCTGTGTGCTGCTTACCCGGTACCTGTCTAACTTGGCTCTCGCGA
TCCTAGCTAGATGCCTGAAGGTTAAGGTTCTTTCTTTTCGCATGGGCTTG
CACAGTAGGGCGGAGAGACGGAACTCGCGTACCCTCATGCTCTGAAAAAT
GCTTGCTTGCTGGCCAAAAGGATGACAGCTGGCCAAAACGAAATCACGGC
CTCTCTTACACGACGTGACGGTGCTCTTGGCATATCGTTGTGGATCATCC
ATGTTTTTTTTTTTTTTTTTTCCACGCGGTGTGATCGCAAAGCGAGGCCA
TGGCACACTCTCTAGCGTCGACATTCAAGAGAAAAATAAGGACGAGAGCA
AAAGGTGTTCGCACACCCCGCGCTGATTGTGATTTGGTCGTTTGTTTTAT
TTTGACGATGAAGATGGCGTTAATGTATCGGCCTGTCCTGCCGAGCACGA
GCGATGGGCATAGCCTCCCCGTAGGCCGTACGTTGCACTTCGTTCGTATT
ATTTGATTTGATTCTCAAGGGGCAGGCGCTCCCTAGTATTCTTCCACGGA
AAGTGTGTGTTAGTGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTAAATTT
CCAGTTTCGAGGAGAAGGAAGTCCCGGAGTGCGAGATATTCAGCTGCCAT
AACCATCTGGGAAATGTGTTTTTCACGCTACGCTAGCTCAATCTCACTTT
GGTCGCCCTGCCTTCCTGCCTTGTGCCTTTTTGTCACGTCTATTTTGTAG
AACGCCATGATCCAGGAGTGTGTGAAGTCCGGCTGCCTAAAGAAAAACAA
CCTCGCCAACCTGTCCACCTTGGACAAGCCCCGCCTGGATAAG GTGCGCT
TTTGCTGCTGCTGCCGGCTCTGTACCTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTCGTTGTTGTCGTTGTTGTTATTGTTTAATATGAT
AACCATTGCGGTTGTGGAGTGATGCTGTCTCTCTGCACGATGCAGATCGC
CAGTGGCGAACACGACACCACGAGCCCGTCTTGGATGTTGATGTTTGGCC
ATATTGAACCTACACACTGTCCGCACAACGGTTCGCAATGCCCGATCTGA
GGTTTCTTGTCGTTTCAAGCCGTCACGTCAAATTTGATCTAACTCGTCGT
TCGCTGTACTCCCTTTCCCTTTCCGTTTCTCTTTCCCCCCCTTTGCTGTG
GCTGACTGGCGGACTGGCTCGGCAGATGTACGACTTCTTCTCCACCTGCG
GGTGGGTGACGGAGAACCACCGAGACTTCGAGGCGACCTCCATGAACGCC
ATCCCCGGCAGTCCTCCCGCTTGA TGAGACAAAGGGAAAAGGGAACGCCT
AACCGTACGTGGACTGCCGTTCAAGGTTTCTTGGCGGAAAGTCGTACGAT
ACATCCCTCAAGATAACCGGATGGAAGAATTACAGAATTACTCCCACGCC
TTGTCGAGAAGGGCAGAGCAGAGTTTGGGAGTTTGGGTTTCTTTGCTCGA
TGTTTTCAGCCTTTTCAGCCAAAGGGCGGTGACAGAGAGGACCCCGGAAA
ACCTGATGCGCCGTTGCCTTCTGCTTGTTGCCGGTGTGGCGTCAGGGTTT
TTATTTCCTTAGAACGGTATGACAGCATAGCATGGGATGGGTTTAGTGAG
GCGGCGCGAGGTGAGAGAGAAGTGAGATGAGAGAGATTCCCGGTTGGTTG
AGAAAGGCACATCTTTGGAAGTTGTAAGGCCGCTATAATAGGAGGGAGAG
TTGTGGCATCCAAGATAAGTCCCGACTACGTGCACAAAGGACGTAACTAG
GGCATGGGCGTTATCGTGGCTTCTTGGCCGATATATCGACAGCTAGCGAC
GGGCGTGAACACAAATGTTTGCAAGGAGGTTGTTTCTTGGAGCAGAAAAA
AAAAACGACGGCGGGAAATTAGTTATTTACGGATTTTCGGCGACATTTGT
GCCTAATTGTTGTGTTTTGAGAGAAGGGAGTGTCGACGCCGGCGGTGGCG
CTGAGGCTGAGGCAGCCCTGAGCTGGAACGTTTTTTAGCTTTTCGTTCCC
AAACATGGGACTCCCTCGCCGGTTGTTTCGAATAGAGGTGTGTGTACGTT
TACCTTTACCTGAAGGTGTGTCCGAAAGTCTAGGTTGAGTTGTGGGGG back to top Coding sequence (CDS) from alignment at C-linearis_contig96:427011..437258-
>mRNA_C-linearis_contig96.17041.1 ID=mRNA_C-linearis_contig96.17041.1|Name=mRNA_C-linearis_contig96.17041.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3882bp|location=Sequence derived from alignment at C-linearis_contig96:427011..437258- (Chordaria linearis ClinC8C monoicous) back to top