mRNA_C-linearis_contig96.17040.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Match: D7G491_ECTSI (Similar to Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3), partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G491_ECTSI) HSP 1 Score: 1386 bits (3587), Expect = 0.000e+0 Identity = 1034/2240 (46.16%), Postives = 1237/2240 (55.22%), Query Frame = 1 Query: 1 IMHKCGQSLIKPSVVSAPMDFLTTETEYIRVWQVFKNWLCSAVSAKLRACVPKFFSLSYRVFNLGICIPTLELDARFLERYGISQEQSLSSKSSLSPRAPQQVEFSREALGKASGLPPARAFYALEVMLCAVGKEAGLGTTLLVDCGVGVLAARGRVVKFTFVQGTDSLEVVHREPRPGHSLPHAPGGNASPSSAAKRGGIHAFGQCYIPYTSRANKELALARSRETTSLLRSLREARADRCLPPQGVEGEESMPTDDGVVETMRSWTPGIVLPTTTAMAVPTPLAATAAVAEHASSAXAH-GNANNNNATVFKSDHNIAAAMASDTATAGGRAKTRVGRITSPLRGLRGRERGVAGTAK-TAAVVNPXXXXXXXXXXXLMDVHARLRGSVLSPSPS----------------------LTTGVLGNARQSSLIANGGGSSGGATACPPMGLEPTGVERLGNHYSPTAQALYLDLGRGRLAWREADGTG--CLRPGSDEVDSSGGTVAGSLEGIEVPWAQQREAAGS------SRASRVWAGLDSRIVAAASXXX----------------------------------------AGGKAAAEGGLPAATAVPLTPVNLPPDFGIDGRS-GRTEEKEALLSPSPLSPFSPTAGRVSNR-PLEARNHTK-PVAPNDPRGSGTTPRRST----------SGVRLTYAPDNDMLP-----------------------STERDKKSCKREGDRSGPGGVAQTQPFGRVGGGSDADGVDGSRDHGGATAVVEAARAVWAVESEKRQQAGFTRYHYYLQRDPTLAESVTCLQPPWQAGIVRKILDGLD-RGGG-----------------NNPRGHDNNGRGGGRSDSSSDGDSCSEDVEDTTGGKPGSRVGRRPAGTESAAVGEGAGARDDDPEEDEEG----------QDKFEVSA------APSSAHLAGSTMMRAGQGVEPARA--SGGGGSDTLVGVGGETVASPTMSPAATSIDKTAVDGAKRQARQVTAGAGAAAVAAAGMPEIPDRFKAGMESRLGEACDAFQASIRRAVLNYVLLDAGQRDRLGIPAVPPGFESEGWGWGKGRAVPESPPEWHRRFLRARDAIGGGGQIVGSPALLAAQALLVRCRETRLVRLPRSAEEIRSSSWSPMTADEFRSSQLRHLHHRVGRIRRLLYPGLSEALKTRLGQVGGXXXXXXXXXXXXXXX----DGHVRRNLLAVNVMTSSVLRGVVEAALSDLVDFFRIHATASSAANQGNGGDNDTQFPRLRRSDRGSGRAGTXXXXXXXXGDRETRREHGGLGDEIRGGEQEEAGEQVLRDCPPLFKVFLEDRFMSHPTSSQPRKLTCRHSLRDLKAAVMDVVRGVVLCFADLPRVTYGCGNGEGCRPTAVEESAIDEVSSRRAGLDIGSTLQPGNLSSGSPPKDHASTLAGASDTAADDVDLRDFHDRRPTTAEGSNTTGGAGGAAGVSPSRKAISRRVSLYSESESSECSSDASSADGGDHGGLAVTSGSDSSSVWSLKDLPRSATDGLAMNCGGRGXXXXXXXXGNSPARLTVLSPTEPLVRATVRDIHSYLRAGSSPAKVACRVYQPFAALLEEEAALALAKTGTAEVNVSEKDLPSLATALERYKSTAAVLRAGGDAAPVELSGRMVVVDCEEASRKLLQVSGDLRKAVLQRVESTLDKLASGVTKQARTAILRLGKRPRSTEEMMEAIECLRTTRAEEQVKLQQQQIWMGQLLDFVFKHGGLQQDMVVAVAGVHRVMVELATATDKAGKAIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXAGFIESDGRLRDMSEKAAAFSKELDRLKAQAVNICEEEAKIDGYTSGVLTAMAGKVISSFQPYADVWSLVGAVDPFITTTTRAPVTTLDPDTISAEHASMKNRLEALQKIMTSRSHAVPARATQESLRLLSTLEKDIPVMKALTNAHLKDRHWWQVSALVGVTVSWEHPTTLQQLNELDVLTDAKVEAILRLSEEADAEHELEESTADVDRFVSDEAVVRIRF------GGDGGDAEKRG----------------GAKGEGAQEGGTGILPRLDEDHLRKVLEKAEHCRKVVSEAQQTDAARIVAATAARAXXXSAAEDGQHDAGSPPGVAEMLETALSNLTSVSEAMLKCAELVVEIESDLEETTADEADHEELLKDAVRRWQALLSARTGQSLKDLVKVIEEELVHLEEV 6210
IMHKCG+SLI+PS VSAPMDFLT+E EY RVWQVFK+WLCSAVSAKLRACVP+FFSLSYRVFNLGICIPTLE D FL RYGISQEQSLSSKSSLSPRAP+QVEFSREALGK +GLP ARA YALE +LCAVGKEAGLG TLLVDCGVGVLAARGRV KFTFVQ LALAR+RETTSLLRSLRE +ADR LPP GVEGEE MPTD+GVV MR+W PG + A A T A S + G+ N + K+ A A + A + RA+ +GR+T PLRG R R R G A +A XXXXXXXXXXXLMDVHARLRGSVLS SPS + VL +QS A G+ T + LEPTGVERLG++YSP AQ LYLD+ RG LAWRE TG G GG + + P +R+AA S +V+ G+ + + AS GG G+P+++ ++ P D R+ G+ E +S SP AG S P + N+T P+ P G T R+ +G +TY P + P + D+ C EG S G A+ R GG D G S A AV A + ++ R+QAGF RYH+YLQ D TLAESVT LQPPWQAGIVRK++ GL RGGG PRG D + D+SS+ D+ V GG+ SR G + G G G + ++ +EG D FEV A ++ H + +G G +P ++ + GG +VG G + +P AT+ ++ A + AKR + G A MPE+PD +KAG+E+ L E C+AF+ASIRRAVLNYV+LDAGQRDRLGI AVPPGF S+GWGWGKGR + +SPPEW RRF+RAR+A+ G QI GSPAL+AAQALL +CR TRL+RLP+SA EI++SSWS MTA+EFRSSQL HL + R+RRLLYPGLSEALK +LG VG DGHVRR L AVNVMT+S+LRG+VE A+SDL ++FLEDR S P S + LTCR SLRDLK AVMDVVR VVLCFAD+PRV Y C +A D+ S +D ST AG DD + FH + +R W+ + R G H R SS A+ ACR+Y+PF +LL+E A KT VSEKDL LA+AL RYKSTAAVLR GGDAAPVEL G +VVVDC++ S KLLQV+GDL K VLQRV STL+KL SGVTKQAR+AILRLGKRPRSTEEM+EAIECLRT RAEEQ+KL+Q+QIWMGQLLDFVF+HGGL D+++AV GVHRVM EL+TATDKA KAIAE XXXXXXXXXXXXXXXXXXXXXX FI+SD R R+MSE AA+ SKEL LKAQAV+I EEEAK+DG+TSG L A+A KVI SFQPYAD+WSLVG+V PFITT RAPVTTL+P+ I+AEHAS+K RLEAL KIM ++SHA P +A QESLRLL+ LEKDIP++KALTN HLKDRHWWQ+SAL GVTVS EHPTTLQQLNELDVLTD K +AILRLS++ADAEH LE STA+VDRFVS+EAV+RI G DG EK+ GA EG Q G ++ R+DEDHL+++L + + RKV+S+ + TDAA+ VA+T XXX Q + + PGV E L+TALS+LT V E MLKCAELVV+IE+ L+ETT DE D EELLKDAV+RW+ L A GQSLKDLV +E+E VHL+EV
Sbjct: 2 IMHKCGRSLIEPSAVSAPMDFLTSEAEYRRVWQVFKHWLCSAVSAKLRACVPRFFSLSYRVFNLGICIPTLEFDESFLNRYGISQEQSLSSKSSLSPRAPKQVEFSREALGKGAGLPSARASYALEGLLCAVGKEAGLGATLLVDCGVGVLAARGRVTKFTFVQ------------------------------------------------------LALARARETTSLLRSLREVQADRFLPPDGVEGEEGMPTDNGVVAAMRAWNPG------RSSASSASSAGTGVSGSLAFSGDGNDGDIRTKNGLLGKNATGAAKITAGEIAGSTVRARIGLGRMTLPLRGFRDRGRTPVGIATGESAAXXXXXXXXXXXXXXLMDVHARLRGSVLSASPSPMARLLDATTAPSPSSPNGDRGIANSVLPERKQSRAAAVEPGTR--PTGHLSLWLEPTGVERLGSYYSPAAQLLYLDVNRGCLAWRENANTGGFTCNEGGSNTRGVGGGLGSRILAPATPKLARRDAARGQTSPTDSANPQVYVGMVANVTRVASQGGPNGVNATVVTGTGSSEKDGHKLGLRTPHMESECHNRPAYAGGGXXXXXPGVPSSSEA--RQMSRPHDSSHSSRNDGQEGRSETWMSSSPPDATPAKAGVQSPELPSDGNNNTVGPLVPESSPGRERTSDRNCPPRAGQVGALAGCEVTYPPRSSSPPVKRNQTPPAVLSKIRRRPDDETGQRDDDRLPCPGEGRGSMEGERAELWMGQRSGGNGDRGGWAAS-----AGAVQAANPELEVSDAAGRRQAGFARYHHYLQCDSTLAESVTVLQPPWQAGIVRKVVHGLSGRGGGXXXXXXXXXCNTSGRHSGTPRGWDLE-KSNDEEDTSSESDNGGVGVRGIGGGRY-SRPGCKDVG--------GTGTENIPAKDAQEGGXXXXXXXXXXDVFEVHVEGPAPVAKTAQHKVPYLAVTSG-GDQPPQSPTTNSGGGRGVVGGGSVFTSRVDGTPRATAFNR-AANTAKRPRARTPRGVAGPGPGEARMPEVPDGWKAGVEACLEETCEAFRASIRRAVLNYVVLDAGQRDRLGISAVPPGFASQGWGWGKGRGIQKSPPEWQRRFVRAREALNMG-QITGSPALVAAQALLAKCRGTRLLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARRVRRLLYPGLSEALKAQLG-VGSKGTRATTAELATRTKSSPPDGHVRRYLAAVNVMTASILRGMVETAISDL-------------------------------------------------------------------------------------QIFLEDR-CSSPNSDRGSTLTCRKSLRDLKEAVMDVVREVVLCFADVPRVVYDC------------RTAGDQASGGYHLVD-------------------PSTPAGRFPEGIDD---QAFH----------------------------VGKRR-------------------------------------WTTQRRCRQVDRG-----------------------------------------HRQRRKASSEARAACRIYRPFESLLQEAATALAPKTAAEATGVSEKDLSGLASALRRYKSTAAVLRTGGDAAPVELQGGIVVVDCQKTSEKLLQVAGDLCKGVLQRVTSTLNKLTSGVTKQARSAILRLGKRPRSTEEMVEAIECLRTMRAEEQIKLRQEQIWMGQLLDFVFEHGGLHHDVIIAVTGVHRVMSELSTATDKAEKAIAEGKAQLXXXXXXXXXXXXXXXXXXXXXXXXFIDSDARPREMSENAASISKELAGLKAQAVDIGEEEAKVDGHTSGTLVALAEKVIVSFQPYADLWSLVGSVGPFITTIMRAPVTTLNPEEITAEHASIKQRLEALIKIMEAKSHANPTKAAQESLRLLAALEKDIPILKALTNPHLKDRHWWQISALAGVTVSVEHPTTLQQLNELDVLTDTKADAILRLSDDADAEHALETSTAEVDRFVSEEAVLRISLVKGSGDGEDGAGVEKKSPAADVEPEGKNGRGAAGAAEEGKQSGV--VVERIDEDHLKRILGQVDRWRKVISDIRLTDAAKAVASTDXXXXXXXXEGSEQSEGWASPGVVEALDTALSDLTLVGEGMLKCAELVVDIETQLDETTGDEVDREELLKDAVKRWRDFLMAHCGQSLKDLVGDVEKERVHLDEV 1930
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Match: A0A6H5L524_9PHAE (DHC_N2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L524_9PHAE) HSP 1 Score: 1194 bits (3088), Expect = 0.000e+0 Identity = 978/2262 (43.24%), Postives = 1196/2262 (52.87%), Query Frame = 1 Query: 1 IMHKCGQSLIKPSVVSAPMDFLTTETEYIRVWQVFKNWLCSAVSAKLRACVPKFFSLSYRVFNLGICIPTLELDARFLER------YGISQEQ--------------SLSSKSSLSPRAPQQVEFSREALGKASGLPPARAFYALEVMLCAVGKEAGLGTTLLVDCGVGVLAARGRVVKFTFVQGTDSLEVVHREPRPGHSLPHAPGGNASPSSAAKRGGIHAFGQCYIPYTSRANKELALARSRETTSLLRSLREARADRCLPPQGVEGEESMPTDDGVVETMRSWTPGIVLPTTTAMAVPTPLAATAAVAEHASSAXAHGNANNNNATVFKSDHNIAAAMASDTATAGGRAKTRVGRITSPLRGLRGRERGVAGTAKTAAVVNPXXXXXXXXXXXLMDVHARLRGSVLSPSPS----------------------LTTGVLGNARQSSLIANGGGSSGGATACPPMGLEPTGVERLGNHYSPTAQALYLDLGRGRLAWREADGTG---CLRPGSDEVDSSGGTVAGSLEGIEVPWAQQREAAGSSRAS-----RVWAGLDSRIVAAASXXX----------------------------------------AGGKAAAEGGLPAATAVPLTPVNLPPDFGIDGRS-GRTEEKEALLSPSPLSPFSPTAG-RVSNRPLEARNHT-------------------------------------KPVAPNDPRGSGTTPRRSTSGVRLTYAPDNDMLPSTERDKKSCKREGDRSGPGGVAQTQPFGRVGGGSDADGVDGSRDHGG---ATAVVEAARAVWAVESEKRQQAGFTR---------------YHYYLQRDPTLAESVTCLQPPWQAGIVRKILDGLDRGGG--------NNPRGHDNNGRG------GGRSDSSSDGDSCSEDVEDTTGGK---PGSRVGRRPAGTESAAV--GEGAGARDDDPEEDEEGQDKFEVSA------APSSAHLAGSTMMRAGQGVEP----ARASGGGGSDTLVGVGGETVASPTMSPAATSIDKTAVDGAKRQARQVTAGAGAAAVAAAGMPEIPDRFKAGMESRLGEACDAFQASIRRAVLNYVLLDAGQRDRLGIPAVPPGFESEGWGWGKGRAVPESPPEWHRRFLRARDAIGGGGQIVGSPALLAAQALLVRCRETRLVRLPRSAEEIRSSSWSPMTADEFRSSQLRHLHHRVGRIRRLLYPGLSEALKTRLGQVGGXXXXXXXXXXXXXXX----DGHVRRNLLAVNVMTSSVLRGVVEAALSDLVDFFRIHATASSAANQGNGGDNDTQFPRLRRSDRGSGRAGTXXXXXXXXGDRETRREHGGLGDEIRGGEQEEAGEQVLRDCPPLFKVFLEDRFMSHPTSSQPRKLTCRHSLRDLKAAVMDVVRGVVLCFADLPRVTYGC---GNGEGCRPTAVEESAIDEVSSRRAGLDI--GSTLQPGNLSSGSPPKDHASTLAGASDTAADDVDLRDFHDRRPTTAEGSNTTGGAGGAAGVSPSRKAISRRVSLYSESESSEC----SSDASSADGGDH-----GGLAVTSGSDSSSVWSLKDLPRSAT-------DGLAMNCGGRGXXXXXXXXGNSPARLTVLSPTEPLVRATVRDIHSYLRAGSSPAKVACRVYQPFAALLEEEAALALAKTGTAEVNVSEKDLPSLATALERYKSTAAVLRAGGDAAPVELSGRMVVVDCEEASRKLLQVSGDLRKAVLQRVESTLDKLASGVTKQARTAILRLGKRPRSTEEMMEAIECLRTTRAEEQVKLQQQQIWMGQLLDFVFKHGGLQQDMVVAVAGVHRVMVELATATDKAGKAIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXAGFIESDGRLRDMSEKAAAFSKELDRLKAQAVNICEEEAKIDGYTSGVLTAMAGKVISSFQPYADVWSLVGAVDPFITTTTRAPVTTLDPDTISAEHASMKNR-----------------------------LEALQKIMTSRSHAVPARATQESLRLLSTLEKDIPVMKALTNAHLKDRHWWQVSALVGVTVSWEHPTTLQQLNELDVLTDAKVEAIL-----------RLSEEADAEHELEESTADVDRFVSDEAVVRI---RFGGDGGDA----------------EKRG---GAKGEGAQEGGTGILPRLDEDHLRKVLEKAEHC-----RKVVSEAQQTDAARIVAATAARAXXXSAAEDGQHDAGSPPGVAEMLET 5982
I++KCG+SLI+PS VSAPMDFLT+E EY RVWQVFKNWLCSAVSAKLRACVP+FFSLSYRVFNLGICIPT+E D FL R + I++EQ S+ + S S R +VEFSREALGK +GLPPARA YALE +LCAVGKEAGLG TLLVDCGVGVLAARGRV KFTFVQ LA AR+RETTSLLRSLRE +ADRCLPP GVEGEE MPTD+GVV MR+W PG ++A + T ++ + A+ + G+ + + + K A A + + RA+ +GRIT PLRG R R R G A + XXXXXXXXXXXLMDVHARLRGSVLS SPS + +L ++S A G+ T + LEPTGVERLG++YSP AQ LYLD+ RG LAWRE+ TG C GSD GG + L A++ A G S + + + G+ S I AAS GG G+P+++ ++ P D D R+ G E L+S SP + AG + P E N+T P +P+ P +P S +RL D + D+ C EG S G + R DG+ D GG A AV A + ++ R+QAGF R YH+Y+Q DPTLAESVT LQPPWQAGIVRK++ GL G N H RG D+SS+ D+ V GG+ PG + G GTE+ + G EG D FEV A ++ H + +G+ P +SGG G VG GG +V S ++ AA D AKR + G MPE+P +KAG+E+RL E C++F++SIRRAVLNYVLLDAGQRDRLGIPAVPPGF SEGWGWGKGR + +SPPEW RR++RAR+A+ G QI GSPAL+AAQALL CR TRL+RLP+SA EI++SSWS MTA+EFRSSQL HL + R+RRLLYPGLSEALK +LG VG DGHVRR L AVNVMT+S+LRG+VE A+SDL FFRIHA A A N S +G + G G RG GE CPP+FKV +R VVLCFAD+PRV Y C G+ V SA V + D G+ G +GASD D + T + ++TT A + GV+ A S+R+SLYSE +SS S D +S DG + G + + SD+ S+ L+ R T G + GG G P++LTVLSP+EP+V V++I + LR SS A+ ACR+++PF +LL+E A KT VSEKDL LA+ L RYKSTAAVLR GGDAAPVEL G +VVVDC++ S KLLQV+GDL K VLQRV STL+KL SGVTKQAR+AILRLGKRPRSTEEM+EAIECLRT R EEQV ++AV GVHRVM EL+TATDKA KAIAE XXXXXXXXXXXXXXXXXXX FI+SD R R+MSE AA+ SKEL LKAQAV+I EEEAK+DG+TSG L A+A KVI SFQPYAD+WSLVG+V PFITT RAPVTTL+P+ I+AEHAS+K R LEAL KIM +RS A P +A QESLRLL+ LEKDIP++KALTN LKDRHWWQ+SAL GVTVS EHPTTLQQLNELDVLTD K +AIL L+ +ADAEH LE+STA+VDRFVS+EAV+RI + GDG D EK G GA EG Q G ++ RLDEDHL+++L + C RKV+++ + TDAA+ VA+ A A + D Q + + PGV + L+T
Sbjct: 2 IIYKCGRSLIEPSAVSAPMDFLTSEAEYRRVWQVFKNWLCSAVSAKLRACVPRFFSLSYRVFNLGICIPTMEFDESFLNRWAFDAHFSINREQESDELGGCLAFPTRSMVTASLTSEREETRVEFSREALGKGAGLPPARASYALEGLLCAVGKEAGLGKTLLVDCGVGVLAARGRVTKFTFVQ------------------------------------------------------LAQARARETTSLLRSLREVQADRCLPPDGVEGEEGMPTDNGVVAAMRAWNPGA----SSASSAGTGVSGSLALLGDGND----GDVRSKSGLLGKDATGAAKITAGEITGSTVRARIGLGRITLPLRGFRDRGRTPVGMATGDSAAXXXXXXXXXXXXXLMDVHARLRGSVLSASPSPMARLLAATTAPSPSSPYGDRGIANSILPERKRSRAAAVEPGTR--PTGHRALWLEPTGVERLGSYYSPAAQLLYLDVSRGCLAWRESANTGGFTCNDGGSDNGGVGGGLGSRILLPATPKLARRDAARGKSSYTDSANAQGYDGIVSSITRAASQAGPNGVNAKVVTRTGSSEKDGHELGLRTPHKESECHNRPAYAGGGDGGCGPGVPSSSKA--CDMSRPHDSSHDSRNDGHEGRSETLMSSSPPDAIAAGAGVQPPELPSEGNNNTVGPLVTESLPGREKASDRSCPPRAGQEGALAGCEVAHPPRSPSPPVKRRQSPPAVLSKIRLRLDNGTDQR---DDDRLPCPGEGCGSMEGERVELWMGQRS---------DGNGDGGGWAVAGAVHAANPGLEVSDATGRRQAGFARCRGVIGSSVCLVCVRYHHYIQCDPTLAESVTVLQPPWQAGIVRKVIHGLSGRGXXXXXXXXXNTSGCHTGTSRGRDVEKSNDEEDTSSESDNAGAGVWGIGGGRYSRPGGK-GVEGTGTENVPTKDAQDGGEXXXXXXXXXEG-DLFEVHVEGPSPLAKTAQHKVPPLAVTSGRDHPPQSPTTNSSGGRG----VG-GGASVFSSRVNRAA--------DTAKRLRARTPRGVVGPGPGEVRMPELPGGWKAGVEARLEETCESFRSSIRRAVLNYVLLDAGQRDRLGIPAVPPGFASEGWGWGKGRGIHKSPPEWRRRYVRAREALNMG-QITGSPALVAAQALLATCRGTRLLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARRVRRLLYPGLSEALKAQLG-VGSNGTRATSAELATRAKPSPPDGHVRRYLAAVNVMTASILRGMVETAISDLQAFFRIHA-AVHANNXXXXXXXXXXXXXXNCSSDATGVDASMSKRPFLY--------LAGSGGGDRG-----RGEACY--CPPIFKV----------------------------------IREVVLCFADVPRVVYDCRTAGDQASGGYHLVNPSAPAGVRAAVCESDTCGGAAAGAGTAXXXXXXXXXXXPASGASDGNTDHSINLENGSNNNKTRKHTSTTISARSSIGVN----APSKRISLYSEPDSSPSDGLSSCDPTSDDGDEDSSSKCGDDSSGTDSDADSLGPLRGFRRELTIKLSTLEKGAGSHSGGGGKLTEAIDSAGEPSKLTVLSPSEPMVENAVKEILAVLRKASSEARAACRIFRPFESLLQEAAVSLAPKTAVEAAGVSEKDLSGLASDLRRYKSTAAVLRTGGDAAPVELPGGIVVVDCQKTSEKLLQVAGDLCKGVLQRVTSTLNKLTSGVTKQARSAILRLGKRPRSTEEMVEAIECLRTMRTEEQV--------------------------IIAVTGVHRVMGELSTATDKAEKAIAEGKAQLQKNXXXXXXXXXXXXXXXXXXXXXFIDSDARPREMSETAASISKELAGLKAQAVDIGEEEAKVDGHTSGALVALAEKVIVSFQPYADIWSLVGSVGPFITTVMRAPVTTLNPEEITAEHASIKQRWSKFSFLANTSPVKCVLFLLSNCSDPSFRLEALIKIMEARSQATPTKAAQESLRLLAALEKDIPIIKALTNPRLKDRHWWQISALAGVTVSVEHPTTLQQLNELDVLTDIKADAILLTSTKQLIIFNMLNSDADAEHALEKSTAEVDRFVSEEAVLRISLEKASGDGEDVAGVEKKSPAADGEPEGEKGGRVAGAAEEGKQSGV--VVERLDEDHLQRILGQVRSCAVDHWRKVIADIKLTDAAKAVASADAAAAAATEGSD-QIEGRASPGVVDALDT 2085
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Match: A0A7S3XR73_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR73_HETAK) HSP 1 Score: 86.3 bits (212), Expect = 2.590e-13 Identity = 66/205 (32.20%), Postives = 93/205 (45.37%), Query Frame = 1 Query: 2770 SIRRAVLNYVLLDAGQRDRLGIPAVPPGFESEGWGWGKGRAVPESPPEWHRRFLRARDAIGGGGQIVGSPALLAAQALLVRCRETR--LVRLPRSAEEIRSSSWSPMTADEFRSSQLRHLHHRVGRIRRLL----YPGLSEALKTRLGQVGGXXXXXXXXXXXXXXXDGHVRRNLLAVNVMTSSVLRGVVEAALSDLVDFFRIHA 3366
S +A L+YVLLD G+R RLG+P +P E WGWG G+A +P W RR ++ A G ++ +PA+ A+ L+ LV LP SA E + W+P +F H H R+ R R+ + YP LS+ + D VRR+L VN LR +V +L L FF + A
Sbjct: 195 SAHKATLDYVLLDEGERRRLGVPEIPRELRPEAWGWGCGKAAKRTPA-WWRRGVQDAHARLDGRALMATPAMKASLRLITAAAGPAACLVDLPASAAEFLARPWAPQRPADF----FNHQHSRLSRTRKEIGDACYPALSQIFMEAV-------------TAGALPADALVRRHLRLVNRALGVRLRALVLRSLRRLGAFFEVFA 381
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Match: A0A7S4SC59_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SC59_9DINO) HSP 1 Score: 70.1 bits (170), Expect = 5.810e-8 Identity = 56/208 (26.92%), Postives = 100/208 (48.08%), Query Frame = 1 Query: 5059 GRLRD-----MSEKAAAFSKELDR---LKAQAVNICEEEAKIDGYTSGVLTAMAGKVISSFQPYADVWSLVGAVDPFITTTTRAPVTTLD----PDTISAEHASMKNRLEALQKIMTSRSHAVPARATQESLRLLSTLEKDIPVMKALTNAHLKDRHWWQVSALVGVTVSWEHPTTLQQLNELDVLTDAKVEAILRLSEEADAEHELE 5646
GR +D M+E + E++R AQ V + ++ G+ + +A +V ++ QP+ +W LV T++P+ + + E A+M R +ALQ + A P R Q L L +P+++A+ N L +RHW ++ A++G + +H TLQ+L ++D+ + A I+ +SE A E E+E
Sbjct: 1107 GRFKDKASVRMAEDYLGQTDEIERHLEQSAQVVRDLQRREELLGWDASGFEELA-EVHAALQPFKSLWILVREYQQAHALWTKSPLVCSQLPFRAEDVQEEAAAMHRRAKALQARLEGEGAARPGRVVQRLSLDLELLRDSLPLLRAVANPDLGERHWREIYAVLGFVLERDHALTLQRLLDMDIGSYAM--DIIEISEGATKEREVE 1311
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Match: A0A1Q9EKW5_SYMMI (Dynein heavy chain 7, axonemal n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EKW5_SYMMI) HSP 1 Score: 67.0 bits (162), Expect = 5.610e-7 Identity = 42/151 (27.81%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 5200 KVISSFQPYADVWSLVGAVDPFITTTTRAPVTTLDPDTISAEHASMKNRLEALQKIMTSRSHAVPARATQESLRLLSTLEKDIPVMKALTNAHLKDRHWWQVSALVGVTVSWEHPTTLQQLNELDVLTDAKVEAILRLSEEADAEHELEES 5652
+ I PY D+W L R P+ L+P+ + A S+ R LQ + S +PA ++ + L ++ +P++ AL N L+ RHW ++S +VG T+ + TL ++ ++DV T + A+ +S+ A E+ LE++
Sbjct: 261 EAIEKLHPYDDLWELAKRFTNEEKKWMRGPLFQLEPEAVDALAGSLAKRAMKLQGFFETNSLPIPAGVAKKLKKDLDAFKQHLPLIHALCNPGLRQRHWDEISEVVGFTMERDAAFTLSRVVDMDVGTH--MNALQEISDSASREYGLEKT 409
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Match: C5KDB9_PERM5 (Ciliary dynein heavy chain, putative n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KDB9_PERM5) HSP 1 Score: 67.0 bits (162), Expect = 5.740e-7 Identity = 48/197 (24.37%), Postives = 96/197 (48.73%), Query Frame = 1 Query: 5062 RLRDMSEKAAAFSKELDRLKAQAVNICEEEAKIDGYTSGVLTAMAGKVISSFQPYADVWSLVGAVDPFITTTTRAPVTTLDPDTISAEHASMKNRLEALQKIMTSRSHAVPARATQESLRLLSTLEKDIPVMKALTNAHLKDRHWWQVSALVGVTVSWEHPTTLQQLNELDVLTDAKVEAILRLSEEADAEHELEES 5652
R+ ++ +K A +S + +N E K++ G+L ++ + Y +WSLV + + LD +T+ ++ S+ LQ P +A L ++K +P+++AL N L+DRHW ++S+ +G T++ + TTLQ++ ++D++ AK + +S+ A E+++E S
Sbjct: 481 RIANLKQKMADYSS-----LREEINSLEALLKMEVTEFGILEECQAEL----EVYDKLWSLVSEYGTKEHMWYKRGMFQLDAETVESDVMSLWRSAYKLQATFEQDGRTAPMKAAAFVKSNLDGVKKHLPLIQALCNPGLRDRHWAEISSAIGFTIARDKTTTLQKMLDMDIVAYAK--ELTDISDRASQEYQIERS 666
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Match: A0A7S2PSU7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PSU7_9DINO) HSP 1 Score: 66.2 bits (160), Expect = 6.010e-7 Identity = 50/189 (26.46%), Postives = 85/189 (44.97%), Query Frame = 1 Query: 5080 EKAAAFSKELDRLKAQAVNICEEEAKIDGYTSGVLTAMAGKVISSFQPYADVWSLVGAVDPFITTTTRAPVTTLDPDTISAEHASMKNRLEALQKIMTSRSHAVPARATQESLRLLSTLEKDIPVMKALTNAHLKDRHWWQVSALVGVTVSWEHPTTLQQLNELDVLTDAKVEAILRLSEEADAEHELE 5646
EK A + +R K A E E + S G I PY D+W LV R P+ +++P+++ +M R LQ + S + PA ++ + L ++ +P++ AL N L+ RHW ++S VG + + TL ++ ++DV T +E + +S+ A E LE
Sbjct: 6 EKILALKENFERSKFDAEKFREREVLLGWDPSEFEKLTEG--IEKLHPYDDLWELVYKFSNEERRWMRGPLFSIEPESVDQTANTMAKRAVKLQALFESSNLPTPANVAKKVKKDLDQFKQHLPLVHALCNPGLRQRHWDEISEAVGFAMERDQAFTLSRVIDMDVETH--MEELQAISDSAAREFGLE 190
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Match: A0A812TQ29_9DINO (DNAH7 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812TQ29_9DINO) HSP 1 Score: 65.9 bits (159), Expect = 1.040e-6 Identity = 41/151 (27.15%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 5200 KVISSFQPYADVWSLVGAVDPFITTTTRAPVTTLDPDTISAEHASMKNRLEALQKIMTSRSHAVPARATQESLRLLSTLEKDIPVMKALTNAHLKDRHWWQVSALVGVTVSWEHPTTLQQLNELDVLTDAKVEAILRLSEEADAEHELEES 5652
+ I PY D+W L R P+ L+P+ + + S+ R LQ + S +PA ++ + L ++ +P++ AL N L+ RHW ++S +VG T+ + TL ++ ++DV T + A+ +S+ A E+ LE++
Sbjct: 99 EAIEKLHPYDDLWELAKRFTNEEKKWMRGPLFQLEPEAVDSLAGSLAKRAMKLQGFFETNSLPIPAGVAKKLKKDLDAFKQHLPLIHALCNPGLRQRHWDEISEVVGFTMERDAAFTLSRVVDMDVGTH--MNALQEISDSASREYGLEKT 247
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Match: A0A812YW20_9DINO (DNAH7 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812YW20_9DINO) HSP 1 Score: 65.9 bits (159), Expect = 1.270e-6 Identity = 41/151 (27.15%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 5200 KVISSFQPYADVWSLVGAVDPFITTTTRAPVTTLDPDTISAEHASMKNRLEALQKIMTSRSHAVPARATQESLRLLSTLEKDIPVMKALTNAHLKDRHWWQVSALVGVTVSWEHPTTLQQLNELDVLTDAKVEAILRLSEEADAEHELEES 5652
+ I PY D+W L R P+ L+P+ + + S+ R LQ + S +PA ++ + L ++ +P++ AL N L+ RHW ++S +VG T+ + TL ++ ++DV T + A+ +S+ A E+ LE++
Sbjct: 197 EAIEKLHPYDDLWELAKRFTNEEKKWMRGPLFQLEPEAVDSLAGSLAKRAMKLQGFFETNSLPIPAGVAKKLKKDLDAFKQHLPLIHALCNPGLRQRHWDEISEVVGFTMERDAAFTLSRVVDMDVGTH--MNALQEISDSASREYGLEKT 345
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Match: A0A0G4GJK7_VITBC (MIF4G domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GJK7_VITBC) HSP 1 Score: 65.5 bits (158), Expect = 1.660e-6 Identity = 81/392 (20.66%), Postives = 155/392 (39.54%), Query Frame = 1 Query: 4495 LERYKSTAAVLRAGGDA----APVELSGRMVVVDCEEASRKLLQVSGDLRKAVLQRVESTLDKLASGVTKQARTAILRLGKRPRSTEEMMEAIECLRTTRAEEQVKLQQQQIWMGQLLDFVFKHGGL-QQDMVVAVAGVHRVMVELATATDKAGKAIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXAGFIESDGRLRDMSE---KAAAFSKELDRLKAQAVNICEEEAKIDGYTSGVLTAMAGKVISSFQPYADVWSLVGAVDPFITTTTRAPVTTLDPDTISAEHASMKNRLEALQKIMTSRSHAVPARATQESLRLLSTLEKDIPVMKALTNAHLKDRHWWQVSALVGVTVSWEHPTTLQQLNELDVLTDAKVEAILRLSEEADAEHELE 5646
+E Y LR DA P E+ M VDC E + L + + + + Q V + ++ V K ++ K+P + E++E E L + +E +L + + +F G L D +V M +A D K + + F G +R M E K ++ +R + + N+ ++E + G+ + + + I+ +PY +W+L R P+ LDP+ + +E +M L+ A PA L + + ++P++ AL N L++RHW ++S +VG + + TL ++ +++V ++ + +SE A E+ +E
Sbjct: 882 IEDYMKEIGRLRNTADAIDTNCPAEVRMTMAAVDCLELNELLKSKARECERILQQVVAERILDRSARVVKSFENFQTKISKKPMTEVELVELEEALDKFKTDESKRLSDEFADIKAWQQMLFNTGHLLTPDDFKSVRAAAEWMQSIAQILDNRDKELKQEREGLEDKFKEQRQKFTEDVQSCLKNVEAF-RKYGNMRQMEEYLEKIQGLKEKFERFQFEVENLNQKEELL-GWEATDFEQLT-EAITKLEPYEKLWNLANDFTKQSHQWIRGPLFQLDPEKVDSEANAMWKTAYKLEASFGD-DQAEPASVAAHVKSQLDSFKANLPLLHALCNPGLRERHWEEISNIVGFAMEPDSSFTLSRVIDMEV--SKHLDQLQEISEAAAKEYAIE 1267 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17040.1 >prot_C-linearis_contig96.17040.1 ID=prot_C-linearis_contig96.17040.1|Name=mRNA_C-linearis_contig96.17040.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2073bp MHKCGQSLIKPSVVSAPMDFLTTETEYIRVWQVFKNWLCSAVSAKLRACVback to top mRNA from alignment at C-linearis_contig96:396438..414224+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig96.17040.1 ID=mRNA_C-linearis_contig96.17040.1|Name=mRNA_C-linearis_contig96.17040.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=17787bp|location=Sequence derived from alignment at C-linearis_contig96:396438..414224+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig96:396438..414224+ >mRNA_C-linearis_contig96.17040.1 ID=mRNA_C-linearis_contig96.17040.1|Name=mRNA_C-linearis_contig96.17040.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=12438bp|location=Sequence derived from alignment at C-linearis_contig96:396438..414224+ (Chordaria linearis ClinC8C monoicous)back to top |