Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 214 |
| Cds size | 210 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930818.941431-CDS-C-linearis_contig96:193233..193289 | 1622930818.941431-CDS-C-linearis_contig96:193233..193289 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 193234..193289 + |
| 1690881266.01014-CDS-C-linearis_contig96:193233..193289 | 1690881266.01014-CDS-C-linearis_contig96:193233..193289 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 193234..193289 + |
| 1622930818.956158-CDS-C-linearis_contig96:193596..193750 | 1622930818.956158-CDS-C-linearis_contig96:193596..193750 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 193597..193750 + |
| 1690881266.0215366-CDS-C-linearis_contig96:193596..193750 | 1690881266.0215366-CDS-C-linearis_contig96:193596..193750 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 193597..193750 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17032.1 >prot_C-linearis_contig96.17032.1 ID=prot_C-linearis_contig96.17032.1|Name=mRNA_C-linearis_contig96.17032.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=70bp
GVRDSRSSSGSTRSKYISRGESRGESTQKHLRQALPAFAEECQPQEALAR
CEVILRAGETVVIKQAPGKT back to topmRNA from alignment at C-linearis_contig96:193234..193752+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig96.17032.1 ID=mRNA_C-linearis_contig96.17032.1|Name=mRNA_C-linearis_contig96.17032.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=519bp|location=Sequence derived from alignment at C-linearis_contig96:193234..193752+ (Chordaria linearis ClinC8C monoicous)
GGGGTTAGAGACAGCCGGAGCAGCAGCGGCAGCACCAGAAGCAAGTACAT
CTCCCGGTAAGGGCGTGACCAACGAAACGTGTAGACTGTACGTCCGTGCA
TGTGTACCTGCTGCAGGGCAACGTCTCGTTGGTTCTATGAGGTTCAAATC
CTAGAGCGCTGGTGCGTCGTGACGGGAGATACCACCCCCCTTGTGCGTAT
ATTGTGCTGCCCAGAATCAGCGCGCCCGTTTTGTCATTTTGAATCCACCC
TTGGTCGCGTTACTGGAAGATTTTCCTGCTGTGCAAAAAGTGCCCTACGC
TGTTGCCGCTGCGCTCGAATGCAATTCATGCGTTCCTGGTCCGCTATGTA
TCCCTCTCAACAGGGGTGAAAGTCGGGGGGAAAGCACCCAAAAACACTTG
CGTCAAGCGTTGCCAGCGTTCGCGGAGGAATGCCAGCCCCAAGAAGCCCT
GGCCCGCTGCGAGGTCATCCTTCGTGCCGGCGAAACCGTTGTAATCAAGC
AGGCTCCGGGAAAAACTAG back to topCoding sequence (CDS) from alignment at C-linearis_contig96:193234..193752+ >mRNA_C-linearis_contig96.17032.1 ID=mRNA_C-linearis_contig96.17032.1|Name=mRNA_C-linearis_contig96.17032.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=420bp|location=Sequence derived from alignment at C-linearis_contig96:193234..193752+ (Chordaria linearis ClinC8C monoicous)
GGGGTTAGAGACAGCCGGAGCAGCAGCGGCAGCACCAGAAGCAAGTACAT
CTCCCGGGGGTTAGAGACAGCCGGAGCAGCAGCGGCAGCACCAGAAGCAA
GTACATCTCCCGGGGTGAAAGTCGGGGGGAAAGCACCCAAAAACACTTGC
GTCAAGCGTTGCCAGCGTTCGCGGAGGAATGCCAGCCCCAAGAAGCCCTG
GCCCGCTGCGAGGTCATCCTTCGTGCCGGCGAAACCGTTGTAATCAAGCA
GGCTCCGGGAAAAACTGGGTGAAAGTCGGGGGGAAAGCACCCAAAAACAC
TTGCGTCAAGCGTTGCCAGCGTTCGCGGAGGAATGCCAGCCCCAAGAAGC
CCTGGCCCGCTGCGAGGTCATCCTTCGTGCCGGCGAAACCGTTGTAATCA
AGCAGGCTCCGGGAAAAACT back to top
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