Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 366 |
| Cds size | 366 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930818.747641-CDS-C-linearis_contig96:129135..129237 | 1622930818.747641-CDS-C-linearis_contig96:129135..129237 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 129136..129237 - |
| 1690881265.9327972-CDS-C-linearis_contig96:129135..129237 | 1690881265.9327972-CDS-C-linearis_contig96:129135..129237 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 129136..129237 - |
| 1622930818.7719488-CDS-C-linearis_contig96:129670..129775 | 1622930818.7719488-CDS-C-linearis_contig96:129670..129775 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 129671..129775 - |
| 1690881265.9437726-CDS-C-linearis_contig96:129670..129775 | 1690881265.9437726-CDS-C-linearis_contig96:129670..129775 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 129671..129775 - |
| 1622930818.8048668-CDS-C-linearis_contig96:129940..130030 | 1622930818.8048668-CDS-C-linearis_contig96:129940..130030 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 129941..130030 - |
| 1690881265.9544177-CDS-C-linearis_contig96:129940..130030 | 1690881265.9544177-CDS-C-linearis_contig96:129940..130030 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 129941..130030 - |
| 1622930818.8217463-CDS-C-linearis_contig96:132423..132492 | 1622930818.8217463-CDS-C-linearis_contig96:132423..132492 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 132424..132492 - |
| 1690881265.9654655-CDS-C-linearis_contig96:132423..132492 | 1690881265.9654655-CDS-C-linearis_contig96:132423..132492 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 132424..132492 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17025.1 >prot_C-linearis_contig96.17025.1 ID=prot_C-linearis_contig96.17025.1|Name=mRNA_C-linearis_contig96.17025.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=122bp
GNAGDGNCLSHAILNGMRVSKDLISAAPRTHPSTPQQKNLGDMDISSTPP
SDEDFESPVTRRTSRASTQRFPLSPASPNKSTTGSGARSSGKSGKKRRLS
FGSEQRGGGGGGGGGGRRRRR* back to topmRNA from alignment at C-linearis_contig96:129136..132492- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig96.17025.1 ID=mRNA_C-linearis_contig96.17025.1|Name=mRNA_C-linearis_contig96.17025.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3357bp|location=Sequence derived from alignment at C-linearis_contig96:129136..132492- (Chordaria linearis ClinC8C monoicous)
GGCAACGCTGGTGATGGGAATTGCCTCTCCCACGCGATTCTCAATGGAAT
GCGAGTTTCCAAGGACCTGGTGAGAGAATATTCCCGTGTGATATGTATAC
CTGAGCAGCAGCAGCCTGCATGTAGGCGCTCTGTTGTTGTAGACTAGACT
TACTTATGCAAGTTGTATTTTTGTATTTTTTAAATTAATCCCGAAAGGTC
CCATGTTTGAAGGTCCGAGTGTACGCAACCTGTGTGTGTGCTAGCTCCCG
CAAGCATTGACAACCTACACTAATGCATGCAGTCTCGACTGCTGTGTGGC
GTATGTACAACAGCCCAACACTGCTGCTGCTGTTTCTTCCTCTCGCTGTT
GTTGGAAAGGTCCGAATGTACGCAACCTGTCTGTGGCCTCCAGAGAGAGA
GAAAGAAAAGAGAGAGAGAAAGAAAAAAAGGTGCCCGCAGTTTTCTGATT
GGTCAATTTTTTTGACAGGAAATTTCCTTTGGCCGAAAATTCCATGGTCG
ACCGATGACGTCAGCCACGGTCGAGAAGTCACCTCCCGGGAAAATTCAAA
AATTTCAAATTCGCCGTGATTGGCTGATTCATAATGATTGATGACAGTAT
CATCATCATTCAAGGGAATCGCCGAACGCATAACCCTGGACCACTGAAAG
AGAGAAAGAAAAGGTGCCCGCAGTTTTCTGATTGGTCAATTTTTTTGACA
GGAAATTTCCTTTGGCCGAAAATTCCATGGTCGACCGATGACGTCAGCCA
CGGTCGAGAAGTCACCTCCCGGGAAAATTCAAAAATTTCAAATTCGCCGT
GATTGGCTGATTGATGACAGTATCATCATCATTCAAGGGAATCGCCGAAC
GCATAACCCTGGACCACTGAAATTGCACTATGCACCTTCACCGATCCACG
CTCGAGAAACACGAAAACCTAAAAGCCAAACAACAGTAGTCCCGCGGACT
ATTCGACACGAGAGGGTACGAAAGAGGGCCCGTAGCAGACATAATGATTT
GTCCAAAAAATTACGTAAGACCCACCCTGACCGACCACACCCACACGAAG
GACGGACGGACGGACGGACGGACTTTGAACAATGGCATCCACGCACAGCG
GGGACAAATCTAAACGGAAGATCGTCGCCAGAAAACACCAACACACACTC
AGTACTCCAACTCTCCCTTCTCTTCCTCTCTCTTTCGAACACCGGGCAAT
GACTCCCTCTTGCGGTTCCACTAAACACCAAGTAATAACTGCTGTCAAGA
ACAACAGCAGGATGGATCATCACCGCCTGATGTGATCACCCTCCTGAGAG
AGACTCAACCTCAACATGTTTCTGCTGTGTGCGTATCCTCCGAACCTTCC
TCGTGTGATTCTTCAACATGTGCTGCTGTGTCCGTCTCCGCGGAACCTTC
TTCATTTGATCGAGGCGGAGGTGGCAGTCATTGAAAAAAAATCCGGAGGA
TTCACCTACGCCTCGTGATAGTTCTTCGGTGCATGTGACCTCCGAAAACT
CGTTTGAATTTGTGTATCACCCACGTGGGTACCCTCGATTCCTGCCCTCC
GCGCCCCCACCGATTTCACACACCCATCTCCATCAACAAGCACAATAGAC
CCACTGTCACGAAGACTACGGGCGGGCAGGTTCGTATTGCTTGACACCTC
TCTGCATTCCGCGCGCGAGGGAGAGTTTCATTTGGACAACCCACGGAGAG
AGAAGGGAGAGAGAGATAAAATATGTACCAGGTAGTTTCACCGAGCCATG
TGTGTGTTTGAACAACAGCAGACGCAAGGCCGCACACCCGCGTGCCCAGC
CTAACGAGCGTTTGTCGTGATGATTCATCTAGTACTGTTGTTCCATTAGC
ATGCCTCTCTTGCCCATAACCTGCACTCGCAGCGGCGACAACCAACACCA
CCAGTTGAATTTCCAAACGTTCAAACTTGCACGCCGGAGATATGACGCTT
CCCTTTGTCATCGCATCTCTTGTGCCGCAGCACCCAGAAAATAGCCAACC
CGAGCAGTGCTCTGAGAGTTCAGGGGTAGACTTCGACCTCGGTTTTCTCC
TTTCCAGATTTGTGTGTGTGTGTCGTCCCTCGGCCGGCACACAACTACGT
TTGTTTTTGCAGCAGTGGTAGATTCGGTTGCGCTCACCACACCCCCCAGA
GAGGGTAGAGTAGTACTCACGCCGCCATGAAGAGAACACGATGACTCGTC
TACAATACGTAGCGTTCGACGTGACTCTCAGTTGAATGCCACGCACATGT
GGCGTCTCGGCGTGCTTGTCGCGTGAACAACATTGACCCTGGTTCAATGC
AGAACGCGGCGAGAGTGGATCGGTATAGACTACATGTATGTAGTCAAACA
CACGTACGTGCGCGCCGAGTCCATCGAGTGGACTTCACTCATACACAGGC
AAGCTGGTTGAACTAGATGCCCATTTGCCTCCGCGCATCCGATCGCCTGC
GCTGGTTCGTAGATATCGGCAGCCCCCAGGACGCACCCATCCACCCCCCA
ACAGAAGAATCTGGGCGACATGGACATCTCTAGCACGCCACCGAGCGATG
AGGTAAGAGCAGCGCATGAGACGTAGAAGCATATAGTTTCTATTAGGCTT
GTGGTGCTCACATCGTGTCATGAACAATGCTCGAGATCTTTTCTGTACCC
AACAGACATAGTCCACTATGCGACCCTCACGGTACGCCGTGCGCCTCTGC
TGTCTTCCATCCCATAGGACTTCGAATCGCCGGTGACGAGGAGGACAAGC
AGGGCGTCCACCCAACGCTTCCCACTATCACCCGCATCGCCCAACAAGAG
TACAACGGGTTCTGGCGCACGGGTGAGGAGGATCAACGCTAATATCCACC
ATCACACACAACTGTATGTAGTTCACTGATCCGTGGTCAAAGAGTTGTTG
CTTCCTTTAGGCGTTTTGATTCGGCATTTCTTGGGAATTTCAGTTCTGTA
TGATTACGATGCCCTCCCTAGCCTGTTTCATTTACGCCCTCTCATCTACC
AACATGGATTGCGCCGACGCCCACCACAAGTTCGCCTTCCGTCATGGGTT
ACGTATGGACATGACAACGTGCTTTCAATATGGTGCCGGCACACACGAAG
ATCATAGGAACGTTCTTGTGCAAGCAGATAACAAGTGGGCTGAGTTGTGG
GTGTAATTTTCAGTTGATTTCAGTCGGACAGAGTGACAATAGTAAAGGCT
CTCCAATTTTTGTGAGTGTCGACACTCATCCCCACCCCTTCGAAACTACG
ACCAGTCATCCGGGAAATCCGGGAAGAAGCGCCGTCTGAGCTTCGGTTCC
GAACAGAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAG
ACGATGA back to topCoding sequence (CDS) from alignment at C-linearis_contig96:129136..132492- >mRNA_C-linearis_contig96.17025.1 ID=mRNA_C-linearis_contig96.17025.1|Name=mRNA_C-linearis_contig96.17025.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at C-linearis_contig96:129136..132492- (Chordaria linearis ClinC8C monoicous)
GGCAACGCTGGTGATGGGAATTGCCTCTCCCACGCGATTCTCAATGGAAT
GCGAGTTTCCAAGGACCTGGGCAACGCTGGTGATGGGAATTGCCTCTCCC
ACGCGATTCTCAATGGAATGCGAGTTTCCAAGGACCTGATATCGGCAGCC
CCCAGGACGCACCCATCCACCCCCCAACAGAAGAATCTGGGCGACATGGA
CATCTCTAGCACGCCACCGAGCGATGAGATATCGGCAGCCCCCAGGACGC
ACCCATCCACCCCCCAACAGAAGAATCTGGGCGACATGGACATCTCTAGC
ACGCCACCGAGCGATGAGGACTTCGAATCGCCGGTGACGAGGAGGACAAG
CAGGGCGTCCACCCAACGCTTCCCACTATCACCCGCATCGCCCAACAAGA
GTACAACGGGTTCTGGCGCACGGGACTTCGAATCGCCGGTGACGAGGAGG
ACAAGCAGGGCGTCCACCCAACGCTTCCCACTATCACCCGCATCGCCCAA
CAAGAGTACAACGGGTTCTGGCGCACGGTCATCCGGGAAATCCGGGAAGA
AGCGCCGTCTGAGCTTCGGTTCCGAACAGAGGGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAAGAAGAAGAAGACGATGATCATCCGGGAAATCCGGGAA
GAAGCGCCGTCTGAGCTTCGGTTCCGAACAGAGGGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAAGAAGAAGAAGACGATGA back to top
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