Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 450 |
Cds size | 450 |
Stop | 1 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622930819.2373118-CDS-C-linearis_contig96:104786..105236 | 1622930819.2373118-CDS-C-linearis_contig96:104786..105236 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 104787..105236 + |
1690881266.1445067-CDS-C-linearis_contig96:104786..105236 | 1690881266.1445067-CDS-C-linearis_contig96:104786..105236 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig96 104787..105236 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17022.1 >prot_C-linearis_contig96.17022.1 ID=prot_C-linearis_contig96.17022.1|Name=mRNA_C-linearis_contig96.17022.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=150bp
IQERLLGAKPVRVVRYADQWYRCECLAALASGLAPASGIDTLCRVVGGMG CCTLEHSSKQHQCTARAGAGVSHRHASEPTPASVQLHCPPATASPSSANS CAGGGGRSDRQFCLFFRELGKCTRAAPPANTAARRESAGAGTRVISTAR* back to topmRNA from alignment at C-linearis_contig96:104787..105236+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig96.17022.1 ID=mRNA_C-linearis_contig96.17022.1|Name=mRNA_C-linearis_contig96.17022.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=450bp|location=Sequence derived from alignment at C-linearis_contig96:104787..105236+ (Chordaria linearis ClinC8C monoicous) ATTCAAGAAAGGCTGCTCGGCGCCAAGCCGGTGAGGGTCGTACGATATGC
AGACCAGTGGTACCGGTGCGAGTGCCTCGCAGCACTCGCCTCAGGCCTCG
CACCCGCCTCAGGCATAGACACTCTCTGTCGAGTTGTTGGAGGCATGGGA
TGCTGCACCCTCGAGCACTCCAGTAAACAACATCAGTGCACAGCTCGGGC
AGGGGCAGGGGTCAGCCACCGCCACGCCTCTGAACCCACACCAGCCAGCG
TGCAACTTCACTGCCCTCCAGCTACAGCTTCGCCAAGCTCAGCAAACTCA
TGTGCGGGGGGTGGCGGCAGGTCAGATAGACAATTCTGCCTCTTCTTTAG
AGAACTCGGAAAATGCACAAGAGCAGCACCGCCAGCAAACACAGCAGCGA
GAAGAGAGTCGGCGGGAGCGGGAACTAGAGTCATCTCCACGGCGCGCTGA
back to topCoding sequence (CDS) from alignment at C-linearis_contig96:104787..105236+ >mRNA_C-linearis_contig96.17022.1 ID=mRNA_C-linearis_contig96.17022.1|Name=mRNA_C-linearis_contig96.17022.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=900bp|location=Sequence derived from alignment at C-linearis_contig96:104787..105236+ (Chordaria linearis ClinC8C monoicous) ATTCAAGAAAGGCTGCTCGGCGCCAAGCCGGTGAGGGTCGTACGATATGC AGACCAGTGGTACCGGTGCGAGTGCCTCGCAGCACTCGCCTCAGGCCTCG CACCCGCCTCAGGCATAGACACTCTCTGTCGAGTTGTTGGAGGCATGGGA TGCTGCACCCTCGAGCACTCCAGTAAACAACATCAGTGCACAGCTCGGGC AGGGGCAGGGGTCAGCCACCGCCACGCCTCTGAACCCACACCAGCCAGCG TGCAACTTCACTGCCCTCCAGCTACAGCTTCGCCAAGCTCAGCAAACTCA TGTGCGGGGGGTGGCGGCAGGTCAGATAGACAATTCTGCCTCTTCTTTAG AGAACTCGGAAAATGCACAAGAGCAGCACCGCCAGCAAACACAGCAGCGA GAAGAGAGTCGGCGGGAGCGGGAACTAGAGTCATCTCCACGGCGCGCTGA ATTCAAGAAAGGCTGCTCGGCGCCAAGCCGGTGAGGGTCGTACGATATGC AGACCAGTGGTACCGGTGCGAGTGCCTCGCAGCACTCGCCTCAGGCCTCG CACCCGCCTCAGGCATAGACACTCTCTGTCGAGTTGTTGGAGGCATGGGA TGCTGCACCCTCGAGCACTCCAGTAAACAACATCAGTGCACAGCTCGGGC AGGGGCAGGGGTCAGCCACCGCCACGCCTCTGAACCCACACCAGCCAGCG TGCAACTTCACTGCCCTCCAGCTACAGCTTCGCCAAGCTCAGCAAACTCA TGTGCGGGGGGTGGCGGCAGGTCAGATAGACAATTCTGCCTCTTCTTTAG AGAACTCGGAAAATGCACAAGAGCAGCACCGCCAGCAAACACAGCAGCGA GAAGAGAGTCGGCGGGAGCGGGAACTAGAGTCATCTCCACGGCGCGCTGA back to top
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