mRNA_C-linearis_contig96.17017.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Match: D7G474_ECTSI (Agmatine deiminase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G474_ECTSI) HSP 1 Score: 596 bits (1537), Expect = 1.020e-208 Identity = 295/397 (74.31%), Postives = 329/397 (82.87%), Query Frame = 3 Query: 168 VAPRPSDSSNKNTTPLLDGFRMPAEWEVHERTWMLWPTRPDTWKALAGPGQAAFAAVAKAIARFEPVTVGVPPGKEESARTLLNGAGVSINVVGIEQDDAWIRDTGPTFVVGGTRGSGKSESQHTRRTIRGVDWSFNAWGGELGGCFSSWKRDDAVASTVLELVGAERYKANMVLEGGSVHVDGEGTLITTEECLLNPNRNPTLDKSDIERYLRDYLGVELVLWLGQGVIGDVDTDGHIDNLLAFVRPGEVVLHWTDDIADPQYAVSSDALQRLEEFQDARGRRLKVHKCSLPGPLYTTKEDVSSLELKPGSRGRSHGKRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKASSRTYPPVQTLFSGREVVQVSTRDIALGGGNIHCVTQQQPLGV 1358 +AP S +TPLLDG+ +PAEWE HERTWMLWP RPDTWK A P Q AFAAVAKAIARFEPVTVGVP + +SA+ LL+ G+ I V IEQDDAWIRDTGPTFVVGGTR S SE Q R +RGVDWSFNAWGGE GGCFS+W +DDA+ASTVL LVGA+RYKANMVLEGGSVHVDGEGT+ITTEECLLNPNRNPT KS+IE++LRDYLGV+LVLWLGQGV GDVDTDGH+DNL+AFV PGEVVLHWTD+ DPQ+AVS DAL+RLE F DARGR+LKVHKC LPGPL+TT+EDVSSLE GSR R+ G RLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKA ++ REV+QV TR +ALGGGNIHC+TQQQP+G Sbjct: 1 MAPGEGSSGCLGSTPLLDGYHVPAEWETHERTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGIGIAV--IEQDDAWIRDTGPTFVVGGTR-SESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKSEIEKHLRDYLGVKLVLWLGQGVTGDVDTDGHVDNLVAFVHPGEVVLHWTDNTEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPGPLHTTEEDVSSLEHTLGSRERAQGDRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKA----------IYPEREVIQVDTRAVALGGGNIHCITQQQPVGA 384
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Match: AGUA_PSEAE (Agmatine deiminase n=233 Tax=Gammaproteobacteria TaxID=1236 RepID=AGUA_PSEAE) HSP 1 Score: 411 bits (1057), Expect = 2.230e-136 Identity = 209/387 (54.01%), Postives = 258/387 (66.67%), Query Frame = 3 Query: 192 SNKNTTPLLDGFRMPAEWEVHERTWMLWPTRPDTWKALAGPGQAAFAAVAKAIARFEPVTVGVPPGKEESARTLLNGAGVSINVVGIEQDDAWIRDTGPTFVVGGTRGSGKSESQHTRRTIRGVDWSFNAWGGELGGCFSSWKRDDAVASTVLELVGAERYKAN-MVLEGGSVHVDGEGTLITTEECLLNPNRNPTLDKSDIERYLRDYLGVELVLWLGQGVIGDVDTDGHIDNLLAFVRPGEVVLHWTDDIADPQYAVSSDALQRLEEFQDARGRRLKVHKCSLPGPLYTTKEDVSSLELKPGSRGRSHGKRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKASSRTYPPVQTLFSGREVVQVSTRDIALGGGNIHCVTQQQP 1349 SN +TP DGFRMPAEWE HE+TWM+WP RPD W+ P QAAFAAVAKAIARFEPVTV G+ E+AR L+ +I VV I DDAW+RDTGPTFV+ + +RGVDW FNAWGG GG + W+RDD VA +LE+ RY+ + VLEGGS+HVDGEGTLITTEECLLN NRNP L +++IER LRDYL VE ++WL G+ D +TDGH+DN + RPGEV+L WTDD DP Y AL+ LEE +DA+GR+L VHK +PGPLY T+E+ +++ GS+ R RLA SYVNF + NG +I P + P+D A + +Q +F EVV V R+I LGGGNIHC+TQQQP Sbjct: 2 SNPTSTPRADGFRMPAEWEPHEQTWMVWPERPDNWRNGGKPAQAAFAAVAKAIARFEPVTVCASAGQYENARARLDDG--NIRVVEISSDDAWVRDTGPTFVI------------DDKGDVRGVDWGFNAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECLLNHNRNPHLSQAEIERTLRDYLAVESIIWLPNGLYND-ETDGHVDNFCCYARPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLYATQEECDGVDIVEGSQPRDPSIRLAGSYVNFLIVNGGIIAPSFDDPKDAEARAI----------LQRVFPEHEVVMVPGREILLGGGNIHCITQQQP 363
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Match: A0A2E1EHT8_9HYPH (Putative agmatine deiminase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E1EHT8_9HYPH) HSP 1 Score: 409 bits (1052), Expect = 1.260e-135 Identity = 208/386 (53.89%), Postives = 254/386 (65.80%), Query Frame = 3 Query: 204 TTPLLDGFRMPAEWEVHERTWMLWPTRPDTWKALAGPGQAAFAAVAKAIARFEPVTVGVPPGKEESARTLLNGAGVSINVVGIEQDDAWIRDTGPTFVVGGTRGSGKSESQHTRRTIRGVDWSFNAWGGELGGCFSSWKRDDAVASTVLELVGAERYKANMVLEGGSVHVDGEGTLITTEECLLNPNRNPTLDKSDIERYLRDYLGVELVLWLGQGVIGDVDTDGHIDNLLAFVRPGEVVLHWTDDIADPQYAVSSDALQRLEEFQDARGRRLKVHKCSLPGPLYTTKEDVSSLELKPGSRGRSHGKRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKASSRTYPPVQTLFSGREVVQVSTRDIALGGGNIHCVTQQQPLGVG 1361 TTP DGFRMPAE+E H TWMLWP RPD W+ A P Q AFAAVA AIA EPVTVGV P + ++AR +L I VV I DD+W+RD GPTFVV G G +R VDW FNAWGG GG + W +DD VAS V E+ +RY+A +VLEGGS+H DGEGTL+TTEECLLNPNRNP L + IE L DYL VE +WLG+GV D +T+GH+DN+ FVRPG V L WTDD ADPQY +S DA +RL DA+GR+L++H+ P P+ T E+ S ++ GS+ R+ G RLAASY+NFY+ANG +++P +G P DE A A LF R V+ V R+I LGGGNIHC+TQQQP G Sbjct: 7 TTPRADGFRMPAEFEPHAGTWMLWPERPDNWRLGAKPAQHAFAAVAAAIAEGEPVTVGVSPRQFQNARAML---APEIRVVEISNDDSWMRDCGPTFVVDGKGG------------VRAVDWIFNAWGGLDGGLYFPWDQDDLVASKVAEIERVDRYRAPIVLEGGSIHADGEGTLLTTEECLLNPNRNPGLTREQIEAVLSDYLSVEKFIWLGRGVYED-ETNGHVDNICCFVRPGVVALTWTDDKADPQYEISRDAFERLSAATDAKGRKLEIHRIHQPDPVLITAEESSGVDTVEGSQPRTEGMRLAASYINFYIANGVIVMPSFGDPHDEPAREQIAA----------LFPERRVIAVPAREILLGGGNIHCITQQQPAPRG 366
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Match: A0A553GVT0_9PSED (Agmatine deiminase n=1 Tax=Pseudomonas mangiferae TaxID=2593654 RepID=A0A553GVT0_9PSED) HSP 1 Score: 409 bits (1052), Expect = 1.260e-135 Identity = 210/384 (54.69%), Postives = 257/384 (66.93%), Query Frame = 3 Query: 201 NTTPLLDGFRMPAEWEVHERTWMLWPTRPDTWKALAGPGQAAFAAVAKAIARFEPVTVGVPPGKEESARTLLNGAGVSINVVGIEQDDAWIRDTGPTFVVGGTRGSGKSESQHTRRTIRGVDWSFNAWGGELGGCFSSWKRDDAVASTVLELVGAERYKAN-MVLEGGSVHVDGEGTLITTEECLLNPNRNPTLDKSDIERYLRDYLGVELVLWLGQGVIGDVDTDGHIDNLLAFVRPGEVVLHWTDDIADPQYAVSSDALQRLEEFQDARGRRLKVHKCSLPGPLYTTKEDVSSLELKPGSRGRSHGKRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKASSRTYPPVQTLFSGREVVQVSTRDIALGGGNIHCVTQQQP 1349 ++TP DGFRMPAEWE H +TWM+WP RPD W+ P QAAF AVA+AIARFEPVTVGV G+ +A L+ +I VV I DDAW+RDTGPTFV+ R +RGVDW+FNAWGG LGG + W+RDD VA +L L RY+ VLEGGS+HVDGEGTLITTEECLLN NRNP L ++DIE LRD+L V+ V+WL G+ D +TDGH+DN FVRPGEV+L WTDD DP +A AL+ LE+ +DARGR L VHK +PGPL+ ++ + + ++ GS+ R RLA SYVNF + NG VI P + P+DEAA L +Q LF REVV V R+I LGGGNIHC+TQQQP Sbjct: 5 DSTPRADGFRMPAEWEPHVQTWMVWPERPDNWRLGGKPAQAAFTAVARAIARFEPVTVGVSAGQYANASARLDDP--NIRVVEISNDDAWVRDTGPTFVI------------DERGEVRGVDWTFNAWGGLLGGLYFPWQRDDQVAGKILGLERCARYRTEGFVLEGGSIHVDGEGTLITTEECLLNRNRNPHLARADIEAVLRDHLAVDTVIWLPDGLYND-ETDGHVDNFCCFVRPGEVLLAWTDDPQDPNHARCQAALKVLEQARDARGRALTVHKMPIPGPLHASEAECAGVDAAVGSQAREAAVRLAGSYVNFLIVNGGVIAPSFDDPQDEAARTL----------LQRLFPDREVVMVPGREILLGGGNIHCITQQQP 363
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Match: A7HS82_PARL1 (Putative agmatine deiminase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HS82_PARL1) HSP 1 Score: 409 bits (1051), Expect = 1.850e-135 Identity = 208/382 (54.45%), Postives = 256/382 (67.02%), Query Frame = 3 Query: 204 TTPLLDGFRMPAEWEVHERTWMLWPTRPDTWKALAGPGQAAFAAVAKAIARFEPVTVGVPPGKEESARTLLNGAGVSINVVGIEQDDAWIRDTGPTFVVGGTRGSGKSESQHTRRTIRGVDWSFNAWGGELGGCFSSWKRDDAVASTVLELVGAERYKANMVLEGGSVHVDGEGTLITTEECLLNPNRNPTLDKSDIERYLRDYLGVELVLWLGQGVIGDVDTDGHIDNLLAFVRPGEVVLHWTDDIADPQYAVSSDALQRLEEFQDARGRRLKVHKCSLPGPLYTTKEDVSSLELKPGSRGRSHGKRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKASSRTYPPVQTLFSGREVVQVSTRDIALGGGNIHCVTQQQP 1349 TTP DGFRMPAE+E H TWMLWP RPD W+ A P Q AF AVA+AI+ EPVTVG P + +AR +L I VV I DD+W+RD G TFVV G G +R +DW FNAWGG GG + W +DD VAS + E+ +RY+A ++LEGGS+HVDGEGTL+TTEECLLNPNRNP L +++IE L DYL +E ++WLG GV+ D +T+GH+DNL FVRPG V L WTDD ADPQY VS DA +RL DARGRRL++HK PGPLY T+E+ ++ G++ R G RLAASYVNFY+ANG V +P +G P D AA+ + L GR+VV V R+I LGGGNIHC+TQQQP Sbjct: 7 TTPKADGFRMPAEFEPHAGTWMLWPERPDNWRLGAKPAQHAFVAVAEAISGGEPVTVGASPRQFANARAMLPP---QIRVVEISNDDSWMRDCGATFVVDGKGG------------VRAIDWIFNAWGGLDGGLYFPWDQDDLVASKMAEIERVDRYRAPIILEGGSIHVDGEGTLLTTEECLLNPNRNPGLSRAEIEAVLTDYLNLEKIVWLGLGVVED-ETNGHVDNLCCFVRPGVVALTWTDDKADPQYDVSHDAFERLSAATDARGRRLEIHKLHQPGPLYITEEESGGVDAVEGTQPRLPGARLAASYVNFYIANGVVAVPVFGDPHDGAAI----------DKIAALLPGRKVVAVPAREILLGGGNIHCITQQQP 362
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Match: A0A2P6V231_9CHLO (Agmatine deiminase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V231_9CHLO) HSP 1 Score: 409 bits (1051), Expect = 4.990e-135 Identity = 201/385 (52.21%), Postives = 260/385 (67.53%), Query Frame = 3 Query: 222 GFRMPAEWEVHERTWMLWPTRPDTWKALAGPGQAAFAAVAKAIARFEPVTVGVPPGKEESARTLLNGAGVSINVVGIEQDDAWIRDTGPTFVVGGTRGSGKSESQHTRRTIRGVDWSFNAWGGELGGCFSSWKRDDAVASTVLELVGAERYKANMVLEGGSVHVDGEGTLITTEECLLNPNRNPTLDKSDIERYLRDYLGVELVLWLGQGVIGDVDTDGHIDNLLAFVRPGEVVLHWTDDIADPQYAVSSDALQRLEEFQDARGRRLKVHKCSLPGPLYTTKEDVSSLELKPGSRGRSHGKRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKASSRTYPPVQTLFSGREVVQVSTRDIALGGGNIHCVTQQQPLGVGTNPTV 1376 G+RMPAEWE H RTWM WP RPD W+ P Q AFAAVA AIA+FEPVTV + +AR +L S+ VV I QDDAW+RDTGPTFV+ E +R++ G+DW FNAWGG GG +++W+RD AVA+TVL+ A R+ +V+EGGS+H DGEGTL+TTEECLLNPNRNP+L + +IE +LR LGV+ V+WL +G+ GD DT+GHIDN F RPG V+L WTDD +DPQ+ +S +AL+ L + DA+GR+LKV K P PL+ ++++ ++ GS+ R G RLAASY+NFYL NG +++P +G EA R +A + +P GR VV V TRDI LGGGNIHC+TQQQP T T Sbjct: 27 GYRMPAEWEPHTRTWMGWPERPDNWRQGGAPAQRAFAAVAAAIAQFEPVTVAANEAQVANARAMLPA---SVEVVCIPQDDAWLRDTGPTFVL--------REEASGQRSLGGIDWVFNAWGGGEGGMYATWERDQAVAATVLQAASARRFACPIVMEGGSLHADGEGTLLTTEECLLNPNRNPSLSRDEIEGWLRRMLGVQKVIWLPRGLCGDDDTNGHIDNFACFARPGTVLLAWTDDASDPQHEISVEALRVLSQATDAKGRQLKVVKVPCPPPLHYSQDEAEGVKEVHGSKARVAGDRLAASYINFYLCNGGLVMPAFGGAAAEADKRAQQALAEAFP-------GRRVVAVPTRDIVLGGGNIHCITQQQPATTATTATA 393
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Match: A0A841HL93_9GAMM (Putative agmatine deiminase n=2 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HL93_9GAMM) HSP 1 Score: 407 bits (1046), Expect = 8.830e-135 Identity = 204/385 (52.99%), Postives = 254/385 (65.97%), Query Frame = 3 Query: 201 NTTPLLDGFRMPAEWEVHERTWMLWPTRPDTWKALAGPGQAAFAAVAKAIARFEPVTVGVPPGKEESARTLLNGAGVSINVVGIEQDDAWIRDTGPTFVVGGTRGSGKSESQHTRRTIRGVDWSFNAWGGELGGCFSSWKRDDAVASTVLELVGAERYKANMVLEGGSVHVDGEGTLITTEECLLNPNRNPTLDKSDIERYLRDYLGVELVLWLGQGVIGDVDTDGHIDNLLAFVRPGEVVLHWTDDIADPQYAVSSDALQRLEEFQDARGRRLKVHKCSLPGPLYTTKEDVSSLELKPGSRGRSHGKRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKASSRTYPPVQTLFSGREVVQVSTRDIALGGGNIHCVTQQQPLG 1355 NTTP DGFRMP E+E H WM+WP RPD W+ A P Q AFAAVA AIA EPVTV V + +ART+L A I VV + +DAW+RDTGPTFVV + R +RGVDW FNAWGG GG F W +DD VA VLE+ G +RY+A ++LEGG++HVDGEGTLITTEECLLNPNRNP LDK IE L +YLG+ V+WL +GV D +T+GH+DNL F RPGEV+L WTD+ DPQY +S DA +RL E +DA+GR+LK+HK PGPLY T+++ ++ G+ R +RLA SYVNFYL N V++P D A R +Q +F R ++ V +R+I LGGGNIHC+TQQ P G Sbjct: 2 NTTPAADGFRMPGEFEPHSGCWMIWPERPDNWRLGAKPAQQAFAAVATAIAVGEPVTVAVSRAQFVNARTMLPDA---IRVVEMSTNDAWVRDTGPTFVV------------NRRGVVRGVDWVFNAWGGMNGGLFFPWDQDDLVARKVLEIEGCDRYRAPLILEGGAIHVDGEGTLITTEECLLNPNRNPHLDKGQIEILLHEYLGISSVIWLTKGVFDD-ETNGHVDNLCCFARPGEVILTWTDNKRDPQYRISQDAFERLSEARDAKGRKLKIHKLQQPGPLYRTQKEADEIDAIDGTTHRKVHERLAGSYVNFYLGNSVVVMPLLDAKRDAQAAR----------QLQKIFPERRLIGVQSREILLGGGNIHCITQQVPAG 360
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Match: UPI000361B82E (agmatine deiminase n=1 Tax=Pseudomonas thermotolerans TaxID=157784 RepID=UPI000361B82E) HSP 1 Score: 407 bits (1046), Expect = 1.010e-134 Identity = 207/384 (53.91%), Postives = 258/384 (67.19%), Query Frame = 3 Query: 201 NTTPLLDGFRMPAEWEVHERTWMLWPTRPDTWKALAGPGQAAFAAVAKAIARFEPVTVGVPPGKEESARTLLNGAGVSINVVGIEQDDAWIRDTGPTFVVGGTRGSGKSESQHTRRTIRGVDWSFNAWGGELGGCFSSWKRDDAVASTVLELVGAERYKAN-MVLEGGSVHVDGEGTLITTEECLLNPNRNPTLDKSDIERYLRDYLGVELVLWLGQGVIGDVDTDGHIDNLLAFVRPGEVVLHWTDDIADPQYAVSSDALQRLEEFQDARGRRLKVHKCSLPGPLYTTKEDVSSLELKPGSRGRSHGKRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKASSRTYPPVQTLFSGREVVQVSTRDIALGGGNIHCVTQQQP 1349 ++TP DGFRMPAEWE H +TWM+WP RPD W+ P QAAF AVAKAIARFEPVTV V G+ E+AR L+ I VV I DDAW+RDTGPTFV+ + ++RGVDW+FNAWGG GG ++SW RDD VAS +LE+ +RY+ VLEGGS+HVDGEGTLITTEECLLN NRNP L + IE LR++L V+ ++WL +G+ D +TDGH+DN FVRPGEV+L WTDD ADP Y AL+ LE+ +DARGR L+VHK +PGPLY T E+ + ++ GS+ R RLA SYVNF + NG +I P + P+D A + + R +P EVV V R+I LGGGNIHC+TQQQP Sbjct: 5 SSTPRADGFRMPAEWEPHSQTWMIWPERPDNWRLGGKPAQAAFTAVAKAIARFEPVTVCVSAGQYENARARLDDP--RIRVVEISSDDAWVRDTGPTFVI------------DDQGSVRGVDWTFNAWGGLDGGLYASWVRDDQVASKILEVERCDRYRTEGFVLEGGSIHVDGEGTLITTEECLLNRNRNPQLSREQIETVLREHLAVDTIIWLPEGLYND-ETDGHVDNFCCFVRPGEVLLAWTDDPADPNYPRCQAALRVLEQARDARGRSLQVHKLPIPGPLYATAEECAGVDRVAGSQPRDPSVRLAGSYVNFLIVNGGIIAPRFDDPKDAEAEAILR---RVFPE-------HEVVMVPGREILLGGGNIHCITQQQP 363
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Match: A0A2N3C5F8_9PROT (Putative agmatine deiminase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-3 TaxID=2013666 RepID=A0A2N3C5F8_9PROT) HSP 1 Score: 404 bits (1039), Expect = 1.150e-133 Identity = 200/383 (52.22%), Postives = 255/383 (66.58%), Query Frame = 3 Query: 204 TTPLLDGFRMPAEWEVHERTWMLWPTRPDTWKALAGPGQAAFAAVAKAIARFEPVTVGVPPGKEESARTLLNGAGVSINVVGIEQDDAWIRDTGPTFVVGGTRGSGKSESQHTRRTIRGVDWSFNAWGGELGGCFSSWKRDDAVASTVLELVGAERYKANMVLEGGSVHVDGEGTLITTEECLLNPNRNPTLDKSDIERYLRDYLGVELVLWLGQGVIGDVDTDGHIDNLLAFVRPGEVVLHWTDDIADPQYAVSSDALQRLEEFQDARGRRLKVHKCSLPGPLYTTKEDVSSLELKPGSRGRSHGKRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKASSRTYPPVQTLFSGREVVQVSTRDIALGGGNIHCVTQQQPL 1352 TTP DGFRMPAE+E H TWMLWP RPD W+ A P Q AFAAVA AIA EPVT+G P + +AR +L I VV I DD+W+RD GPTFVV G G +R +DW FNAWGG GG + W +DD VA+ E+ ERY+A ++LEGGS+H DG+GTL+TTEECLLNPNRNP + + +IE L DYLG+E +WLG+GV D +T GHIDNL FVRPG V L WTDD +DPQY +S DA +RL DA+GR+L++H+ P P++ T E+ S +++ G++ R+ G RLAASY+NFY+ANG +++P +G DE A + A LF R+V+ V R+I LGGGNIHC+TQQQPL Sbjct: 7 TTPRADGFRMPAEFEPHAGTWMLWPERPDNWRLGAKPAQHAFAAVAAAIATGEPVTIGASPRQFSNARAVL---APEIRVVEISNDDSWMRDCGPTFVVDGKGG------------VRAIDWIFNAWGGLDGGLYFPWDQDDLVAAKAAEIERVERYRAPIILEGGSIHADGQGTLLTTEECLLNPNRNPGMTREEIEHVLADYLGLEKFIWLGRGVHED-ETSGHIDNLACFVRPGVVALTWTDDRSDPQYEISQDAFERLSAATDAKGRKLEIHRIHQPDPVHITAEESSGIDIVEGTQPRTEGMRLAASYINFYIANGTIVMPAFGDAHDEPARKQIAA----------LFPDRKVIAVPAREILLGGGNIHCITQQQPL 363
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Match: A0A534D6J5_9GAMM (Putative agmatine deiminase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534D6J5_9GAMM) HSP 1 Score: 404 bits (1039), Expect = 1.560e-133 Identity = 209/383 (54.57%), Postives = 250/383 (65.27%), Query Frame = 3 Query: 207 TPLLDGFRMPAEWEVHERTWMLWPTRPDTWKALAGPGQAAFAAVAKAIARFEPVTVGVPPGKEESARTLLNGAGVSINVVGIEQDDAWIRDTGPTFVVGGTRGSGKSESQHTRRTIRGVDWSFNAWGGELGGCFSSWKRDDAVASTVLELVGAERYKANMVLEGGSVHVDGEGTLITTEECLLNPNRNPTLDKSDIERYLRDYLGVELVLWLGQGVIGDVDTDGHIDNLLAFVRPGEVVLHWTDDIADPQYAVSSDALQRLEEFQDARGRRLKVHKCSLPGPLYTTKEDVSSLELKPGSRGRSHGKRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKASSRTYPPVQTLFSGREVVQVSTRDIALGGGNIHCVTQQQPLG 1355 TP DGFRMP E+E H WMLWP RPD W+ A P Q AFA VA AIARFEPVTVGV +AR LL + VV + DDAW+RD GPT VV G R T+RGVDW FNAWGG GG + W +DD VA VLE+ +RY+A +V EGG++HVDG+GT + TEECLLN NRNP L + DIER LRDYLGV ++WLG+GV D +TDGHIDNL FVRPGEV L WTD DPQ+A+S DA +RL E +DARGRRLKV + +PGPL + + + + G+RGR G+RLAASYVNFY+ANG +I+P D A R K+ LF R VV V R+I LGGG+IHC+TQQ P G Sbjct: 8 TPAADGFRMPGEFEPHAGCWMLWPERPDNWREAARPAQLAFAQVAAAIARFEPVTVGVSNPHYTAARALLPA---DVRVVEMAHDDAWMRDVGPTCVVDG------------RGTVRGVDWRFNAWGGLAGGLYFPWDQDDLVARKVLEIERLDRYRAALVNEGGAIHVDGDGTAMVTEECLLNANRNPRLAREDIERCLRDYLGVSHMIWLGRGVFND-ETDGHIDNLACFVRPGEVCLTWTDRRRDPQHAISFDAWERLHEARDARGRRLKVQRLPMPGPLSLRAREAAGVVAREGTRGRVAGERLAASYVNFYIANGGIIMPLLDARTDRTAARRLKS----------LFPARRVVGVPAREILLGGGSIHCITQQIPAG 364 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17017.1 >prot_C-linearis_contig96.17017.1 ID=prot_C-linearis_contig96.17017.1|Name=mRNA_C-linearis_contig96.17017.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=412bp MSLTTNSTVAPRPSDSSNKNTTPLLDGFRMPAEWEVHERTWMLWPTRPDTback to top mRNA from alignment at C-linearis_contig96:64861..72678+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig96.17017.1 ID=mRNA_C-linearis_contig96.17017.1|Name=mRNA_C-linearis_contig96.17017.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7818bp|location=Sequence derived from alignment at C-linearis_contig96:64861..72678+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig96:64861..72678+ >mRNA_C-linearis_contig96.17017.1 ID=mRNA_C-linearis_contig96.17017.1|Name=mRNA_C-linearis_contig96.17017.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2472bp|location=Sequence derived from alignment at C-linearis_contig96:64861..72678+ (Chordaria linearis ClinC8C monoicous)back to top |