Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 417 |
| Cds size | 417 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930809.0655873-CDS-C-linearis_contig95:556186..556253 | 1622930809.0655873-CDS-C-linearis_contig95:556186..556253 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 556187..556253 - |
| 1690881261.0549839-CDS-C-linearis_contig95:556186..556253 | 1690881261.0549839-CDS-C-linearis_contig95:556186..556253 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 556187..556253 - |
| 1622930809.0868862-CDS-C-linearis_contig95:556842..557133 | 1622930809.0868862-CDS-C-linearis_contig95:556842..557133 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 556843..557133 - |
| 1690881261.0646777-CDS-C-linearis_contig95:556842..557133 | 1690881261.0646777-CDS-C-linearis_contig95:556842..557133 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 556843..557133 - |
| 1622930809.1038768-CDS-C-linearis_contig95:557388..557447 | 1622930809.1038768-CDS-C-linearis_contig95:557388..557447 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 557389..557447 - |
| 1690881261.0755513-CDS-C-linearis_contig95:557388..557447 | 1690881261.0755513-CDS-C-linearis_contig95:557388..557447 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 557389..557447 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig95.17007.1 >prot_C-linearis_contig95.17007.1 ID=prot_C-linearis_contig95.17007.1|Name=mRNA_C-linearis_contig95.17007.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=139bp
STNRTRSARPREHHKQQQIRSEIAGNFPRSLQPLRRTRTLATCRLLELWR
VPCQGSNIAQAPKVTPTSTERSAHCQPAHTLSYACRTALLHPGPPFLCNT
PHTHTRTHPRRRRERDRYRLSTRWTSLALLSTTLTPTP* back to topmRNA from alignment at C-linearis_contig95:556187..557447- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig95.17007.1 ID=mRNA_C-linearis_contig95.17007.1|Name=mRNA_C-linearis_contig95.17007.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1261bp|location=Sequence derived from alignment at C-linearis_contig95:556187..557447- (Chordaria linearis ClinC8C monoicous)
AGCACTAACCGGACTCGGTCAGCGCGGCCTCGTGAGCATCACAAGCAGCA
GCAAATCAGGTCGGAATCCCTCTCTCTCTCTCTCGGTGACCCGCACCGTG
CGGATGCGTACAAGAGTATCTCACAACCATGAGGCCTGGATATACACTGG
TGGACGTTTGCTCGGATTGGGGGGGGATTGACCAAGGTGTCAGACCGGCG
TGCCGTTGTGCAGACCTTGGCAAGGTCAAAAAGTCCCCAAAGTGGCTCAA
CGTGCTGACCACCTGACGTTGGCAACGTCAACCCTTCCTTGTACCTTGCC
AACCCTCCGCCAAGGTCAGAAATTGCTGGAAATTTCCCAAGGTCGCTCCA
ACCTCTACGTAGAACGCGCACGTTGGCAACGTGCCGCCTCCTCGAGCTTT
GGAGGGTACCTTGCCAAGGGTCAAACATCGCCCAAGCGCCCAAGGTCACT
CCAACGTCCACGGAACGAAGCGCACATTGCCAACCCGCACACACCTTGTC
ATACGCGTGTAGAACGGCATTGCTTCATCCCGGGCCCCCCTTTCTTTGCA
ACACACCACACACACACACACGCACACACCCGCGGCGACGACGAGAGAGA
GACAGGTATGTATGCACAAGCGCGCGCGTATAAAAAGCTGTGGTGTGTGG
TGTGCCTATGCTGTGACGTCTCGATGTATTTTGCGCCTCGCCACGTGAGA
GTAGTTATTCAGAGACGAGTGAACCACGAGCGAGAGAACGGCACACCGGT
GCGCACAGGCCTTATTGCTGTGAGATGAAACCTTTACCCACAAAGGTCGA
GAGTTGTTAGCTCTTTGAGATGTGCACACGTGCACCCATACGAGACCATA
GTCTATAGACTATGATACCGCTAGACTATGTACTGCTAAAAAGAACCCCA
ACCGAACGGGTGAGCTATAAGTAGGAGTGAGTAAATTCTACTACTAGACT
ATGTACTGTGATCCAGACAGGTGCAGGCACTACAGCAGTGTAGCAGAGAG
AGGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTAGACCAC
CCTGTAAGGTCCCGCGCAGGGGGGGCGAACGGCCACGGACCATTGAAGCG
TAGACTAGACTAATGTTCATTGCCGACATCGGCCTATCTACATAGTATGC
AGATTCATTCACCCGTACCTGTGTCGCCCACGATTCCATATCAGGTATAG
GCTGTCTACGAGATGGACATCGCTCGCCCTGCTGTCTACGACCCTGACAC
CCACCCCCTGA back to topCoding sequence (CDS) from alignment at C-linearis_contig95:556187..557447- >mRNA_C-linearis_contig95.17007.1 ID=mRNA_C-linearis_contig95.17007.1|Name=mRNA_C-linearis_contig95.17007.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at C-linearis_contig95:556187..557447- (Chordaria linearis ClinC8C monoicous)
AGCACTAACCGGACTCGGTCAGCGCGGCCTCGTGAGCATCACAAGCAGCA
GCAAATCAGAGCACTAACCGGACTCGGTCAGCGCGGCCTCGTGAGCATCA
CAAGCAGCAGCAAATCAGGTCAGAAATTGCTGGAAATTTCCCAAGGTCGC
TCCAACCTCTACGTAGAACGCGCACGTTGGCAACGTGCCGCCTCCTCGAG
CTTTGGAGGGTACCTTGCCAAGGGTCAAACATCGCCCAAGCGCCCAAGGT
CACTCCAACGTCCACGGAACGAAGCGCACATTGCCAACCCGCACACACCT
TGTCATACGCGTGTAGAACGGCATTGCTTCATCCCGGGCCCCCCTTTCTT
TGCAACACACCACACACACACACACGCACACACCCGCGGCGACGACGAGA
GAGAGACAGGTCAGAAATTGCTGGAAATTTCCCAAGGTCGCTCCAACCTC
TACGTAGAACGCGCACGTTGGCAACGTGCCGCCTCCTCGAGCTTTGGAGG
GTACCTTGCCAAGGGTCAAACATCGCCCAAGCGCCCAAGGTCACTCCAAC
GTCCACGGAACGAAGCGCACATTGCCAACCCGCACACACCTTGTCATACG
CGTGTAGAACGGCATTGCTTCATCCCGGGCCCCCCTTTCTTTGCAACACA
CCACACACACACACACGCACACACCCGCGGCGACGACGAGAGAGAGACAG
GTATAGGCTGTCTACGAGATGGACATCGCTCGCCCTGCTGTCTACGACCC
TGACACCCACCCCCTGAGTATAGGCTGTCTACGAGATGGACATCGCTCGC
CCTGCTGTCTACGACCCTGACACCCACCCCCTGA back to top
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