Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 195 |
| Cds size | 192 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930808.9908416-CDS-C-linearis_contig95:503878..504020 | 1622930808.9908416-CDS-C-linearis_contig95:503878..504020 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 503879..504020 - |
| 1690881261.0306127-CDS-C-linearis_contig95:503878..504020 | 1690881261.0306127-CDS-C-linearis_contig95:503878..504020 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 503879..504020 - |
| 1622930809.008741-CDS-C-linearis_contig95:504691..504741 | 1622930809.008741-CDS-C-linearis_contig95:504691..504741 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 504692..504741 - |
| 1690881261.0423453-CDS-C-linearis_contig95:504691..504741 | 1690881261.0423453-CDS-C-linearis_contig95:504691..504741 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig95 504692..504741 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig95.17002.1 >prot_C-linearis_contig95.17002.1 ID=prot_C-linearis_contig95.17002.1|Name=mRNA_C-linearis_contig95.17002.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=64bp
AEVVRQCTAGLDKMSSLISNEAARRAQSLVRRLAAEKQRKAQKQNGINSE
KVPTASHSHAKDER back to topmRNA from alignment at C-linearis_contig95:503877..504741- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig95.17002.1 ID=mRNA_C-linearis_contig95.17002.1|Name=mRNA_C-linearis_contig95.17002.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=865bp|location=Sequence derived from alignment at C-linearis_contig95:503877..504741- (Chordaria linearis ClinC8C monoicous)
GCGGAAGTTGTCCGGCAGTGTACAGCAGGGCTGGACAAGATGTCCTCACT
GTGAGTTTTTTGCAAGTTATACTGTACGTGCAGGGCGTGCGTACGGGGTA
CCGGTACGACGGGACAATCTACAGCAGTAGGGGACGAAACGCCTTTCGTT
GTCAGAATCTTAGCCGCCGTGAAAAACAATTCGAATGCTGTGAAGTATAT
TATTGCATGCTCCGCGACACAAAAAGTGTAAAATACGTTTGCCAGGCACG
GAAGCTGAAAGGAGGGTTGGAGTATTTTTAACGCGTGCGGTGGTATCCGG
TGGTCGTCGTTCTGTAACGCTTGTGGGTATTCCTACTGTCGTGCAAAAGC
GCGTCCGCGGTTAAACTAAATTTTGTACTTCGTAGTGGCAAACTCGTCTG
ACTCCCCATTCCCCACCCCTCACTACATGCATCCGGGCTACGTTCGCTTA
CTGAAAGGGTCGGTATGCATTTTTTCCGCAGGCAAGCGTTCAAGGTAGAT
GGTAAATGTCCGATACTTCGCTGGCAAAGTTCCCCGACAGTGCCCTAGGA
TGGGGGGCTAACGGAAACGTGGATCCCCTCGTCGTCTTTTTGGCAGGACT
GACCGCCATGTGGATGATATCTGAGTGTTTGAAGAGACTGACCGGTGTAA
CGGCAGATTTAGATACCAACAGCATGCTGCTTCCGCCCCGCCAACTCGCG
CGATGTATTTTGGTAATGTAGCATTTCGAACGAAGCTGCTAGGCGGGCAC
AAAGCTTGGTCCGCCGACTTGCGGCAGAAAAGCAGCGAAAGGCGCAGAAA
CAAAACGGTATCAACAGTGAAAAAGTGCCTACAGCCAGCCATAGCCATGC
GAAGGACGAACGGTG back to topCoding sequence (CDS) from alignment at C-linearis_contig95:503877..504741- >mRNA_C-linearis_contig95.17002.1 ID=mRNA_C-linearis_contig95.17002.1|Name=mRNA_C-linearis_contig95.17002.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=384bp|location=Sequence derived from alignment at C-linearis_contig95:503877..504741- (Chordaria linearis ClinC8C monoicous)
GCGGAAGTTGTCCGGCAGTGTACAGCAGGGCTGGACAAGATGTCCTCACT
GCGGAAGTTGTCCGGCAGTGTACAGCAGGGCTGGACAAGATGTCCTCACT
CATTTCGAACGAAGCTGCTAGGCGGGCACAAAGCTTGGTCCGCCGACTTG
CGGCAGAAAAGCAGCGAAAGGCGCAGAAACAAAACGGTATCAACAGTGAA
AAAGTGCCTACAGCCAGCCATAGCCATGCGAAGGACGAACGGCATTTCGA
ACGAAGCTGCTAGGCGGGCACAAAGCTTGGTCCGCCGACTTGCGGCAGAA
AAGCAGCGAAAGGCGCAGAAACAAAACGGTATCAACAGTGAAAAAGTGCC
TACAGCCAGCCATAGCCATGCGAAGGACGAACGG back to top
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