mRNA_C-linearis_contig95.16983.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 689 bits (1777), Expect = 7.930e-243 Identity = 370/543 (68.14%), Postives = 421/543 (77.53%), Query Frame = 1 Query: 196 VVQRLNKKAKVPDRKGLLSRMRAVKRGLETEVALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSLRAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNVMKYMEGRRRQPQGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAAVDIAMEKHASNNTPASAES-SNSXXXXXXXXXXXPQGDPKRPRMSAFENNTA-------------AAHAEDAQASGVAGSKPT--KTASGVMA-----TTT----VFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1749 +V LNK+AKVP R+ LLSRMRAVK LE+EVALMLD EFVAITTDGWTSR NESYMSLTVAYI+ EW+L HLSLDCAKHTGTTTGEDLA L+AGM+E HDLTGRV ACVTDCEPSM+KAGRLLEV G TISH+GC+NHRMESTTSSVFNGRSL A+ LARTLVGRYKKSSQMAARL LCGIL++ L VMQ+VETRWWSTWAM+ RLLYL KAIK+HES+D V PLLSD DWEVL+L+EPIL PFM+ QKDLEGA+YVTGSMTI +A+LR+G++ AI +L+ ++QGL T QKAME+V PDAE L+ D TNRWGDG+N+++Y EG+RRQPQGFK QV+AT LDPR KHLYGIQ EH VWRAVA AAVDIA+ KHA + PASAE ++ QG KRPRMSAFE A +A + Q + + + K A G+ T T VF NPLD WRK+QLEYPLLAALARRVLAIPSSQAQSER+FSTAGLTVTP RS L D NVELLVYL Sbjct: 1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 612 bits (1579), Expect = 4.420e-213 Identity = 325/528 (61.55%), Postives = 395/528 (74.81%), Query Frame = 1 Query: 157 LALSFVEYPEFRVVVQRLNKKAKVPDRKGLLSRMRAVKRGLETEVALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSLRAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNVMKYMEGRRRQPQGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAAVDIAMEKHASNNTPASAESSNSXXXXXXXXXXXPQGDPKRPRMSAFENNTAAAHAEDAQASGVAGS----KPTKTASGV------MATTT-------------VFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERM 1671 ++ FVEYPEF VV LNKKA+ P R+ L+ +MR +K+ LE+EVALMLD+E+VAITTDGWTSR NESYMSLTVAYI+ W+L HLSL+C KHTG+T GEDLA+ I MIE H LTGRVTACVTDCEPSMVKAGRLLEVGG + H+GC+NHRMESTTSSVFNG+SL A++ AR +VGRYK+SSQM+ RLA GIL++ L V+Q+VETRWWS+WAMI RLLYL KAIK+HES D + P+LS+ DWEVL+L+EPIL PFM+ QKDLEGAKYVTGSMT+P I +LR+G++ AI +LR R G++ + ++AME+VLPDAE L ED NRWGDG+++++Y EG+RRQPQGFKL QV AT +DPR KHLYGI+ +EH +VWRAVA AVDIA EK +S+NT S + + QG PKR R+SAFE AAAHA A AS G K + AS V TT V+ +PLDWWR RQ+E+P LAALARRVLAIPSSQA SER+ Sbjct: 24 VSFLFVEYPEFHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEA-AAAAHA-GAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 343 bits (881), Expect = 9.470e-104 Identity = 220/544 (40.44%), Postives = 298/544 (54.78%), Query Frame = 1 Query: 310 EFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSL-RAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNVMKYMEGRRRQPQGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAAVDIAMEKHASNNTPA--------------------------------------------SAESSNSXXXXXXXXXXXPQGDPKRPRMSAFENNTAAAHAEDAQASGVAGSKPTKTASGVMATTT-------------------VFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1749 E VA+T+DGWT N++YMS T YI+S ++L L L+C KH T GEDL + + MI + LTGR A TDCE SMVKAGRLLE G ++H+GC HR+ES TS F G + +A++LAR +V RY SSQ + RL +C I+++ V+Q+VETRWWST+ I RL+ L + I HE +D PPLL ++DWEVLQLVE +L+PFM QK LE +K VT + P IA L+DG+ +A+ L+ S + + A + V+ A+ L DL+ RWGD T+V+ Y EG RRQP+GFK QV AT L PR K LYGI+ +EH VW A A+ AV +A+E A+ + SA +S+S XXXX AH + Q++ + S + +++ V PL+WWR + EYP LA+LARRVL IP+ QAQSER+FS+AGL VT R+ + NV L+V+L Sbjct: 4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEG-VTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAE-AKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXX-----XXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 328 bits (840), Expect = 1.540e-102 Identity = 213/529 (40.26%), Postives = 305/529 (57.66%), Query Frame = 1 Query: 172 VEYPEFRVVVQRLNKKAKVPDRKGLLSRMRAVKRGLETEVALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSL-RAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDL--TNRWGDGTNVMKYMEGRRRQPQGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAAVDIAMEKHASNNTPASAESSNSXXXXXXXXXXXPQGDPKRPRMSAFENNTAAAHAEDAQASGVAGSKPTKTASGVMATTTVFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1749 VE F +V+ L +A VP ++ L ++R +K+GL+ EV L E VA+T+DGWTS N++YM T YI+S ++L L ++C KH G TTGEDL + + MI + LT R A TDCEPSMVKAGRLLE G ++H+GC HR+ES TS F G + +A++LAR +V RY SSQ + RL + I+++ V+Q+VETRWWST+A I RLL L + I HE +D +PPLL ++DWEVLQ+VEP+ +PF+ +QK E +K VT S+ IP IA LRD + +A+ L+ ES++ +A+ +D+ + T+V+ +P+GFK QV AT LDPR K LYGI+ +EH VW AVA+ AV +A+E A+ +T ++ SS+ P P +A + A AS V G K + ++ ++T+ RVL IP+SQ QSER+FS+AGL VT R+ + NVEL+++L Sbjct: 2 VENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEG-VTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQ---------AHACPAESIVAEAK---KDVFFAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSLI--------------PVEP--AAXXXXXXXXXXDFAAASAVPGDK--QQSANASSSTS------------------------RVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFL 468
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 285 bits (730), Expect = 1.800e-87 Identity = 163/345 (47.25%), Postives = 215/345 (62.32%), Query Frame = 1 Query: 343 SRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSL-RAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNVMKYMEGRRRQPQGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAAVDIAMEKHASNNTPASAESS 1374 S N++YM+ T YI+S ++L L L+ KH G TTGEDL + + MI + LTGR A TDCEP MVKAGRLLE G +SH+GC HR ES TS F G + +A++L R +V RY SSQ + RL +C I+++ V+Q+VETRWWST +D +PPLL+++DWEVLQLVEP+L PFM QK LE +K VT S+ IA LRD + +AI L+ S + + A + +L A L DL+ RW DGT+V+ Y EG RRQP+GFK QV AT LDPR K LYGI+ +EH VW AVA+ AV +A+E A+ +T ++ SS Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEG-VSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAE-AKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASS 329
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 228 bits (581), Expect = 8.660e-62 Identity = 149/388 (38.40%), Postives = 206/388 (53.09%), Query Frame = 1 Query: 196 VVQRLNKKAKVPDRKGLLSRMRAVKRGLETEVALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTIS-HVGCANHRMESTTSSVFNGRSLRAVS-LARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNVMKYMEGRRRQPQGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAAVDIAMEKHASNNT 1353 +V + A+VP++K ++ MR VK+ + +V+ +++ E V IT+DGWTS N++YMSLT I S W+L LS+DC+K GTTTG+ LA I + H LTG+VTA TDCEPSMVK GRLL G T+S +GC N+R+EST+S VFNG ++ V LAR LV RY SSQ A R L++ +K + +D R +D+ VTGS+ +P I LR+ ++DAI++L A +V+P + L +D +RWGDG N++ Y EG RRQP GFK V V AT LDPR K YG+ E VW+ V + AV IA+E + N+ Sbjct: 1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLL-AGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADR-----------------------------------LKQFVKTYLGVDN-----------------------KRVIQDV-----VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNT-AWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENS 323
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Match: UPI0019556103 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019556103) HSP 1 Score: 140 bits (354), Expect = 3.030e-32 Identity = 140/552 (25.36%), Postives = 244/552 (44.20%), Query Frame = 1 Query: 163 LSFVEYPEFRVVVQRLNKKAKVPDRKGLLSRMRAVKRGLETEV-ALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTD-------CEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSL-RAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAI-------KMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNVMKYMEGRRRQPQGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAAVDIAMEKHASNNT--PASAESSNSXXXXXXXXXXXPQGDPKRPRMSAFENNTAAAHAED-----AQASGVAGSKPTKTASGVMATTTVFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1749 ++ VE F+ +++ L VP R + + + A GL+ +V AL+ E +++TTD WTS R ESYM++T +I+ +W+ Q L L+ + TG ++A ++ + ++ + G++ + V D C ++ ++ + E+ G V CA H ++ ++ + RAV+ +R LVG +KK + L + ++Q+V TRW ST++M+ RLL I + D L+ W ++ ++ +L+P + L + S T+P +A L+ +L A T + K+ L+E++ RW +M V + A +DPR K L + ++ + VA +A +A T P S E + + + + E A ED ++ SG + + + T + PL WW+K Q YP LA +A+R+L IP++ SER+FS AG V RSCL NV++LV+L Sbjct: 4 IAVVEGQGFKNLLKVLEPGYTVPARHTITNALTAKYEGLKDKVSALIQQSEALSLTTDMWTSLRMESYMTVTAHFIDGDWKAQSLVLETKQMEEAHTGINIAARLSEVADTFGIQGKIVSVVCDNAANMTLCVETLKESHKWAEMQG-----VRCAGHTLQLCINAALKQDPICRAVAASRHLVGHFKKGHKAKTGLKQKQEQQNVPQHELIQDVSTRWNSTFSMLERLLEQRWPITAVLSDPNFTKKSDSSTLDLTTAHWNAIEDIKNVLKPMTTLTELLSEEDNASLSATVPMLANLKK------RHLAIADDDSPITKKMKSK---------LVEEIDGRWEFKNRMMMTNS-----------VYITAAVVDPRFKQLSFLDDAKRDEAYIVVAQ----LAERLNAVTGTGEPGSEEEQHV----------------SKKQKNDKEKEIAMLLCEDEDDLISRESGGRSRVTEEMKNYLQDRTKIDSGPLGWWKKNQDRYPSLARVAKRLLCIPATSTPSERIFSKAGFIVNKARSCLLPKNVDMLVFL 504
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 133 bits (334), Expect = 3.850e-31 Identity = 103/236 (43.64%), Postives = 129/236 (54.66%), Query Frame = 1 Query: 1129 DLTNRWGDGTNVMKYMEGRRRQPQGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAAVDIAMEKHASNNTPASAESSNSXXXXXXXXXXXPQ------------------------GDPKRPRM-----SAFENNTAAAHAEDAQASGVAGSKPTKTASGVMATTTVFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1749 D NRWGDG N++ Y EGRRRQP GFK VQV AT LDPR K LYG+ E VW+ V + AV IA+E S N+ ++ XXXXXXXXXXX G + P++ S+F ++ + A V S K V+ +PLDWWR R ++P LA LARRVLAIP++QA+SER+FS AG VT NR+ LA + VELLV L Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKV--STGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Match: A0A6P6NAP0_CARAU (zinc finger BED domain-containing protein 1-like n=7 Tax=Clupeocephala TaxID=186625 RepID=A0A6P6NAP0_CARAU) HSP 1 Score: 138 bits (348), Expect = 6.250e-31 Identity = 157/554 (28.34%), Postives = 235/554 (42.42%), Query Frame = 1 Query: 130 LVRLIVNNYLALSFVEYPEFRVVVQRLNKKAKVPDRKGLLSRM--RAVKRGLETEVALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVT-DCEPSMVKAGRLLEVGGGTISHVGCANHRME-STTSSVFNGRSLRAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSD--EDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNVMKYMEGRRRQPQGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAAVDIAM-----EKHASNNTPASAESSNSXXXXXXXXXXXPQGDPKRPRMSAFENNTAAAHA---EDAQASGVAGSKPTKTASGVMATTTVFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1749 + I + + LS V P F + L+K+ +P R K+ E A + EF A T D W+SR E Y SLTV +I+ ++ L+ L TGE++A + + S DL C+T D +MV A RL E + + C HR+ + +++ + R RA +L R LVG + S + A L L++ ++ E TRW S MIAR+L KAI S D L +D +VL+ + L P + L G +YV+ S P + V + DAE DLT T V+ Y+ + P +L+ V A LDPR K Y I PA+ + VD+A EK + T +S+ P G+ + + +F +AA+ + ED + + T T G +PL WWR ++ YP L +AR+ L +P++ A SER+FST G VT RS L + V +LV+L Sbjct: 162 ITEFIAKDMMPLSTVTKPGFVALTYTLDKRYNIPSRTYFSQTAIPELYKKCKEKVAAEVKTVEFFASTADMWSSRTAEPYQSLTVHFIDEDFNLRARCLQTTYFPDDHTGENIAAGLREGLASWDLHEENHVCITTDNASNMVLAARLNEW-----TRLQCFGHRLHLAIENALKDDRVSRATALCRKLVGHFSHSWKKKAALMEAQRELKLPEHNLITECPTRWGSKEMMIARVLEQAKAISQVLSGDRYARSLIPTWQDIDVLESIHKALHPLLEFTDALSGEEYVSISYLKPVLHLFATSV-------------------------LSEDAEDT--DLTK--SIKTKVLAYLNNKYGDPNIQELLDV-ACFLDPRFKIQY-ISTDNIPAIKTRLKTEMVDLAQRTYHREKRSRTETVQMPQSAQ------------PLGEKAKRSLGSFFKTSAASPSLPVEDVAEAELNNYLMTPTIDGE-------DDPLAWWRVHKISYPQLCIMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKPAKVNILVFL 660
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Match: UPI00187C7BC3 (E3 SUMO-protein ligase ZBED1-like n=5 Tax=Acanthopagrus latus TaxID=8177 RepID=UPI00187C7BC3) HSP 1 Score: 137 bits (346), Expect = 9.010e-31 Identity = 148/561 (26.38%), Postives = 236/561 (42.07%), Query Frame = 1 Query: 124 DDLVRLIVNNYLALSFVEYPEFRVVVQRLNKKAKVPDRK-----GLLSRMRAVKRGLETEVALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVT-DCEPSMVKAGRLLEVGGGTISHVGCANHRME-STTSSVFNGRSLRAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLL--SDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNVMKYMEGRRRQPQGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAAVDIAMEKHASNNTPASAESSNSXXXXXXXXXXXPQGDPKRPRMSAFENNTAAAHAEDAQASGVAGSKPTKTASGVMATTTVF----------PNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1749 D + + + +S V F+ +V+ L+KK +P R L + + +E E+ + E+ A TTD W+SR E YMSLT+ YI+ ++ ++ L + TGE +A+ + + S L C+T D +++KA L + C HR+ + +++ + R RAV + + LV + S + LA L++ + E TRW S AMI R+L KAI S D L S +D E+L+ + L P L KYV+ S P + + N LT T + T ++ Y+E + + P+ L+ + A+ LDPR K Y + P R +++ A ++ME+ S+ A ++ P K+ + +F T A +PT +AT NPLDWWR+ Q YP L+ LA++ L IP++ A SER+FST G VT RS L +V+ LV+L Sbjct: 124 DAITFYLAKDMCPISTVSNKGFKSMVKILDKKYVIPSRNYFSKVALPALYEKCREEIEREITTV---EYFATTTDLWSSRTMEPYMSLTIHYIDDDFTMKSRCLQTSFFPQDHTGEAIAQGLREALASWSLREEKQVCITTDNGSNVIKAASL-----NKWMRLQCFGHRLHLAIENAMKDPRIDRAVGICKKLVSSFSYSWRRKKELARAQKELKLPEHGLKTECPTRWGSRQAMIERVLEQHKAISQVLSSDRKSRHLLPSWQDTEILEAIYKSLHPLTEFTDALSSEKYVSVSFVKPVLHLFTSSILKV-----NDDDPELTNTIK------------------------TKILTYLEEKYKDPETQDLLNL-ASALDPRFKLRYTSEDRVAPIQARLMSEMAASLSMEQGPSDGGTADRAEDDA-----------PSTSKKKKTLGSFFKITERA-------------RPTHPPQQALATELQSYLQCADLDSEENPLDWWREHQRVYPRLSKLAKKYLGIPATSAPSERVFSTGGNIVTCLRSSLKPESVDRLVFL 622 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig95.16983.1 >prot_C-linearis_contig95.16983.1 ID=prot_C-linearis_contig95.16983.1|Name=mRNA_C-linearis_contig95.16983.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=583bp DAFHEIERAKKLGSATSPAAGGGAAAGGIKKHFLEALPEWHDDLVRLIVNback to top mRNA from alignment at C-linearis_contig95:310632..313015- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig95.16983.1 ID=mRNA_C-linearis_contig95.16983.1|Name=mRNA_C-linearis_contig95.16983.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2384bp|location=Sequence derived from alignment at C-linearis_contig95:310632..313015- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig95:310632..313015- >mRNA_C-linearis_contig95.16983.1 ID=mRNA_C-linearis_contig95.16983.1|Name=mRNA_C-linearis_contig95.16983.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3498bp|location=Sequence derived from alignment at C-linearis_contig95:310632..313015- (Chordaria linearis ClinC8C monoicous)back to top |