mRNA_C-linearis_contig95.16963.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Match: D8LLI4_ECTSI (SEN1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI4_ECTSI) HSP 1 Score: 1287 bits (3330), Expect = 0.000e+0 Identity = 980/1981 (49.47%), Postives = 1119/1981 (56.49%), Query Frame = 1 Query: 52 MDVEVISVDDE------------DEEIFSQEA--------------QEQQRPAV---VDLTRTNSSAGPAEPNPVASFEQEYHVLRSAAQGFEPPLEAIAELLLRHPQHWWCRYPDAMTEMLMALEGGAASDAGSSAXXXXXXXXXXXXXXXXXXXXXXXGVGIVWRAASRQLSACKRCLVGYHAAQDRVFAGLLADEEEGRTTEAGERFRAAILAQDSARLQHSFRSAGNNVSAAAAGAPA----------------------------------ASAALDVEVGHAFWEVLSYAQLLEDGGIESAFLEFFAKVISSGPEAFAGEEWDNQHLPGVYALLVHRDASTRAWAQSMARRAGRIRSEEYLEVVSPVVDRWVPVLEQGLNVASEKPAAMAAGSDYVEKERLHWSGLHVALQLLEPSAASLLVYGFPSLVDLTLQKFDDGPECRVVPVYLQVCGCLAALLRLLGTGVWEYSSREPSEVLDAIERQTRHDGHGGGA-AAGFAPGPRGCFLQSRQPPNEAVHKKALEMLPMLVASA-----PATSVGVSRRVGGSENAGPRGDESGVTTSTQSADSSLGSPSSSSSSLSLADTALVFLSTEIAALSAGGHSPADQGTLTRRRMALTRAFLGVLETCYGGXXXXXXAINGVDDDPLHPEGWPWNAAAGAXXXXXXXXXXXXXXXWWHPSWPVHSLASWGPRLADIAGDRRGGGISXXXXXXXXXALVVDRAARVVELVLRQHAGAAWRDALSALRPPLGLSLGGESVAHSDAGGRERGEDGKMAVLPLCGPLLERICLDLPLMDLPVRVHAAVFAAHGWLSLLPCGDSAIRAAEGAGGGRRAARVLARLHSGVLSQFLKLFVPYVQGLTKTVKLRGASVSPVLLPQVAPFIFQVLLAAVPAARAALEELLSCSVFPPDAETRGLGGGGGGSMGPKKGDLRPLLRRLPPDCARACFLAVPQALGAMAAAGPHLCVKSWGPLFQAISVLGCAVLLPPAVGASRPSDSGRNGGGGRGGDGELWEALEAVWEFVFLQASARVLPEALPALREQHASRLEEALRALFGSLEGLWPLLTGPVPRHRRPGLADGFYSSRSLWLCSLLAWVSEPWLPVAAREAAAGFVQRSLLPFLSVPSSXXXXXXXXXXXXXXXXXXXXXXXXXGKKVRLVGNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGGRGRDGVGP---AAPGNPFA-RPAERPVGGSSGAGDGSGWPQTPWERRLGTG-SAAPRLPPAGGAGSEAWFDQFEFTRVSGAAGRPLVSSAMGRASRGARGTAAQ----------------------REAVARPSASSIEECGLG------GARTGFAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWRPRGSVVERWREMQRKQMAEPGTASKSGTNTQQQXXXXXXXXXXXXXXXXXQADRRAQTGAKAAFAAXXXXXXXXXXXXXXXGARAPNXXXXXXXXXXXXXXXXXXXXTEASSMELHRLVLSSWTVSELLDAQ-RSQRHGXXXXXXXXXXXFQGAGDG---GRDTRLSSSLWLSKVPTRFQSVEQYLDIFRGLLLEEIFATLVAGLGGSTDGRGXXXXXXXACGSGGSETLRVAGFVESKHGGFSHVTLVASDGGGGRGPADAGAASPRFVHDDVLLLSLVRPASASSGGDAVDG-----SPAVSCLGIFEKEPRGSVRGPAGXXXXXRSSVRAKLLFRQHAAGAVGGDRXXXXXXXXXXXXXXXXIPKKAKAKAALVGLSDLDEEEPGEAGETAGGAVAMAILRALQEPGTEVRVTRLEGLSTSTREFAALEAVGSTSLLHHLLQATSDPTLVPVPTPPAR-PGSNTTTNP-AGAANLGPPYPVDEASFTDACKLLASVEQSVYRGRAESGGRGDA-----AVDALAPAELLVRSLGCLASFR 5640
MDVEVISVD + DEEIFSQE QEQQ +DLT A ++ FEQEY L +AQGF P EA+AELLLRHP+HWWCRYPDAM EML++L+GG S+ A GVGIVW+ S QLS CKRCL YHAA++ V A LL++EE T+ R AA+L D RLQ SFRS G A AG PA +S L V+ AFWEVLSY+QLLEDGGIE AFL ++V SSG F+GEEW NQH PGV LLVHR+ASTRAWAQSMARRAG IR++EY+EV+SPV+DRWVPVLE+GL+ P A + D + ERLHWSGLHVALQLLEPSAA LL YGFP+LVDL LQKFDDGP R V +YLQVCGCL+ALLRLLG +WEYSSR+PSEVL+A+ERQT + G GA A F RG R PNEA+ KK EMLP+LV+SA P+ + G V G++ G D GV A + ++++ L +AD L FLS EIA+LSA ++G RR+MAL +A LGVLETCY G + + D D L PE WPWNA XXXXXXXXX W +PSWPV S+ SWGPRLADIAGDR G VVDRAARVV+LVLR+H GAAWR ALSALR P S G A +G E E V+PLCGPLLERICL+LPLMDLPVRVHAAVF AHGWLSLLPCG SAIRAAEG GG A+RVLA LHSG++SQF++LFVPYVQGLT+ VK RGA LLAAVP ARAALEEL+S SVF S G ++GDLRPLL R PPDCARACF AVPQALGAMAAAGPHL +KSW PLFQA+ VLGCAVLLP A A + ELWE LEAVWEF+FLQ V+PEALPALREQHA+RLEEA RALFGSLE LWPLLTGP + RRP L DGFY SRSLWL LL+WVS WLP AREAAA FVQRSLLPFL SS K VRLVG+ GG AAP NPFA A R GGSS A SGW +TPWE RLG G SA P AG SE+ Q ++ + A R + + R S + R++ R +A+S E LG +R A XXXXXXXXXXXXXXXXXXXXX RPRGSVVERWREMQR+QM E S Q XXXXXXXXXXXXXX XXXXXXXXXXXXX G EAS+ ELH+LVLSSWTV EL A +S R G FQG G GR + SSSLWLSKVPTRFQSVEQYL++FRGLLL+EIFATLVA L DG G XXXXXX + TLRVA VE GGF H+T+VA DGGG +S RF HDDVLLLSL +P+ + GG V G + +CLG+FEKEPRG+ RGPAG RSSVRAK+LFR A G G +R IPKKA A++ G EEE A A+LRA +E G++VRVTRLEGLSTSTREF ALEA +LLHH+LQATS+P+L P+ P R PG++TT+N A L PPY VDEASF DACK L+SVE S G + +GG A A D PAE L+RSLGCLASFR
Sbjct: 1 MDVEVISVDGQSDESNLEEGELGDEEIFSQEQPAQGEQDAEIPPQQQEQQHDLATDTIDLTAAGCEAA------ISRFEQEYDDLHRSAQGFGFPFEAVAELLLRHPEHWWCRYPDAMAEMLLSLDGGCESEGLPYAPVTSDTSTTSSDSLT--------GVGIVWQTVSLQLSTCKRCLRRYHAAKETVLARLLSEEERPAETQ---RLEAAVLEHDRDRLQRSFRSTGK----APAGIPARSDGAGSGTVATGQGLAGVDGEACKTTGAAATASSSFPLGVDGTLAFWEVLSYSQLLEDGGIEGAFLAALSQVTSSGEGVFSGEEW-NQHWPGVLTLLVHREASTRAWAQSMARRAGGIRAKEYVEVLSPVIDRWVPVLERGLSSGGAHPTASGSDPDS-DGERLHWSGLHVALQLLEPSAAPLLAYGFPTLVDLALQKFDDGPGPRGVSLYLQVCGCLSALLRLLGAEMWEYSSRQPSEVLEALERQTSY---GDGADTADF----RGTGR--RMLPNEAIQKKVFEMLPLLVSSAAAVDRPSGATGWGTAVYGNQGIGGGTDHPGV------AARHIDDAAAAAGVLPVADAVLSFLSREIASLSAVAPEN-NRGAHGRRQMALAKALLGVLETCYNGSAGGGESDD--DSDLLEPESWPWNAXX----XXXXXXXXXTSGAWCYPSWPVRSVPSWGPRLADIAGDRSG-----RASGESTAVAVVDRAARVVQLVLREHGGAAWRAALSALRLPPSASSSGSGSASQSSGRMEDEE----CVVPLCGPLLERICLELPLMDLPVRVHAAVFEAHGWLSLLPCGHSAIRAAEGRGG-PAASRVLAALHSGMMSQFVRLFVPYVQGLTEIVKNRGA-----------------LLAAVPTARAALEELVSRSVF---------------SDGGRRGDLRPLLGRFPPDCARACFQAVPQALGAMAAAGPHLSLKSWSPLFQAVGVLGCAVLLPKASAADGXXXXXXXXXXXXXXEDELWEVLEAVWEFIFLQ----VIPEALPALREQHATRLEEAFRALFGSLESLWPLLTGPAAQRRRPRLTDGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHA-SSCGSAAGGGDERGARGDDDPSVGVSPRKTVRLVGDKLRAVEGEGRSAWALSSEEPEADLLAALKSAAVAATAKGTAVDPCSPPAA------TGGAAXXXXXXXXXAAPRNPFALSAARRGNGGSSAA---SGWSRTPWEDRLGVGNSATPSSESAGRPLSESALAQITYSSPAAAPERTARTPGLRRGSHYPKAGGNDXXXXXXXXXXXXXXXXXXXXXFRDSRGRSTAASTEGGSLGVRPEKTASRAVSNSTANDDDEVGSSSGARGRKTYVTAAEAAXXXXXXXXXXXXXXXXXXXXXXXARPRGSVVERWREMQRRQMGETTEVVASAPAASQSRSLXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXRGDSPDGGNGSLATTVAGAATLDYASLAEASATELHKLVLSSWTVPELFAASTKSARSGGR---------FQGPKRGHEVGRSS--SSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAAL----DGGGSXXXXXXXXXPPEAMTLRVASLVEGGKGGFGHITMVADDGGG---------SSHRFAHDDVLLLSLAKPSDGAVGGGHVSGDGGSAATTTACLGLFEKEPRGAARGPAGMPGSGRSSVRAKVLFRSTAPGDRGRNRSTIERGAGAI------IPKKATAESRGQGQG---EEE-----------AASAVLRAFRELGSQVRVTRLEGLSTSTREFVALEASPRAALLHHILQATSEPSLQPLQETPQRAPGNSTTSNDNLWATKLAPPYLVDEASFADACKRLSSVEDSALLGESGAGGGSPAIAAGLAADIAGPAESLMRSLGCLASFR 1827
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Match: D8LLI3_ECTSI (Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI3_ECTSI) HSP 1 Score: 885 bits (2286), Expect = 1.750e-282 Identity = 584/1006 (58.05%), Postives = 660/1006 (65.61%), Query Frame = 1 Query: 6118 PKRPSLVPAALWDRLSQEFNASQLTAIWAAAASQLEARQDRAASAAGT--AATQPARVQAGLAAAA-------------ASYRTVGGGIVLLQGPPGTGKTRTILGVVSAILARREEKGDGAAGTGASAXXXXXXXXXXXXXXXXGMGTTLGVGARQKRPGVARRWVAAKTHQRVLVCAPSNGAVDELTQRLALETGGVWDHRGKAVAPRVVRLGRPSEDSAPRVKAVSLEFMVEERVKLHAKSTEARNAETKIREAYAQINEATRALRSGAAGGEAAGVSGLGSAENRRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRLLLFQVVCSTLSGCGSAPLVEAVSLSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRASRLNLEVSLFERLEKAGYPVHMLTVQYRMHPEIRAFPSARFYGGRLSDAPCVREESSQTQSQHATSSSTSSSLGPCFPPLLVVDVASGLERRVGSSYQNQLEASFVATFVDRLAAAASGSRHGRWGPVGSGG-----------------GAVRVGVITPYRGQVQCIRQELGSSSSGSRW--LKGGGGDGEVDVEVSTVDGFQGKEVDVVLFSCVRAPSSASGGHXXXXXXXXXXXXXXIGFLADQRRMNVAITRARLSLVVLGNARRLSSDGNWRALVEHAASRERV----IESRGGDG-------GGEICARLEARAAS--AAKRSLSPKGQDGDRRVRRNTPDVGSARVGGAAPHGDDPPPTKKRVEAPRGQRGSATGHPQEGDRTAERGPLYRSRD-------------------GDREGRRQADDGTGGTGRQRKLARRRSAGGETRSPPTPAEDVAGRDRDRAPTHRRRLQKRPRVAGSEPACGGS------GGRGTRSAKRVPSSTKLLPDSSKPVNEGFLAGLLGSLNSNAEGIASGKDHAFRQGLRGGEDEARKRAAAGPGLGGANITELSRPRELKQAPAATYA 8919
PKRPSLVPAALWDRLSQEFN SQL AIWAAAAS EA++D AA+A AT A V A A LLQGPPGTGKTRT+LGVVSAILARREEK G+ XXXXXX GMGTTL GARQKRPGVA RWVAAKTHQR+LVCAPSNGAVDEL QRLALE+GGVWD RG AVAPRVVRLG+PSED+A RVKAVSLEFMVEERVKLHAKS EAR AETKIRE +A+I+EA RA+RSG G E GV+G+GSAENRRHQLNT IRRLRG++LVAKQRRRDALR LEVERG+IRRSLV VC+TLSGCGS P+VEAVSLS KGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRA+RLNLEVSLFERLE+AGYPVHMLTVQYRMHPEIRAFPSARFY GRL+DAPCVR++++ ++ ++ LGPCFPP L+VDV+SG ERR GSSYQN EASFV+ F+ RL A SG R GR V +GG G VRVGVITPYRGQV CI+QEL LKGG DG VD EVSTVDGFQGKEVDVVLFSCVRAPSS XXXXIGFLADQRRMNVA+TRAR SLVVLGN RLSSDG W+ALV+H+ SR+R+ +++R G G +CARLE AA + + G R R VG G D KK ++APR GS TG GD + G + D DR + + + G+G++RK + R G P+ + G RDR P +R+ Q+ G++P GS GG R KR + + + GFL GLL SL+SNA GIASGK+H FRQGLRGGEDE R+R AA P LGGA +TELSRP E KQAP A ++
Sbjct: 71 PKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREAQEDLAAAARDNDGRATPEAAVLAERRAPVNHAXXXXXXXXXXXXXXXXXXXXXLLQGPPGTGKTRTVLGVVSAILARREEKDCGSX-------------XXXXXXGARGMGTTLAPGARQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVEERVKLHAKSAEARTAETKIRETHARIDEAGRAVRSGGVG-EVGGVAGIGSAENRRHQLNTHIRRLRGELLVAKQRRRDALRSLEVERGKIRRSLV-------------VCATLSGCGSGPMVEAVSLSGKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGYPVHMLTVQYRMHPEIRAFPSARFYNGRLTDAPCVRDQAAIPAQSPSSETTALPPLGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVA--SGLRSGRG--VKAGGXXXXXXXXXXGQDREKSGVVRVGVITPYRGQVHCIQQELSGXXXXXXXXRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXX------------XXXXIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDGTWKALVDHSKSRDRLEPEAVKARTSGGXXXXXXDGEALCARLEETAAGKKGGRDRSGDRQSTGRNRAGRGGRGEADDAVGSGVAGGSD----KKEIQAPRRPAGSRTGGHGRGDGS---GGINVPDDRAAAAVVVPPAVADIGEHCADRRANPRHEPESVGSGQRRKPSSRGGDGVR------PSAGLEGSVRDRPPVDKRQ-QRHEEAGGAKPTPRGSACRRPDGGAANRPQKRARADGQGAAKRVSTPDGGFLGGLLSSLSSNAGGIASGKEHDFRQGLRGGEDEERRRVAAAPRLGGARVTELSRPVEPKQAPPARHS 1019
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Match: A0A6H5J5S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5S7_9PHAE) HSP 1 Score: 624 bits (1609), Expect = 3.110e-189 Identity = 555/1228 (45.20%), Postives = 627/1228 (51.06%), Query Frame = 1 Query: 1276 VWEYSSREPSEVLDAIERQTRHDGHGGGA-AAGFAPGPRGCFLQSRQPPNEAVHKKALEMLPMLVASA-----PATSVGVSRRVGGSENAGPRGDESGVTTSTQSADSSLGSPSSSSSSLSLADTALVFLSTEIAALSAGGHSPADQGTLTRRRMALTRAFLGVLETCYGGXXXXXXAINGVDDDPLHPEGWPWNAAAGAXXXXXXXXXXXXXXXWWHPSWPVHSLASWGPRLADIAGDRRGGGISXXXXXXXXXALVVDRAARVVELVLRQHAGAAWRDALSALRPPLGLSLGGESVAHSDAGGRERGEDGKMAVLPLCGPLLERICLDLPLMDLPVRVHAAVFAAHGWLSLLPCGDSAIRAAEGAGGGRRAARVLARLHSGVLSQFLKLFVPYVQGLTKTVKLRGASVSPVLLPQVAPFIFQVLLAAVPAARAALEELLSCSVFPPDAETRGLGGGGGGSMGPKKGDLRPLLRRLPPDCARACFLAVPQALGAMAAAGPHLCVKSWGPLFQAISVLGCAVLLPPAVGASRPSDSGRNGGGGRGG-----DGELWEALEAVWEFVFLQASARVLPEALPALREQHASRLEEALRALFGSLEGLWPLLTGPVPRHRRPGLADGFYSSRSLWLCSLLAWVSEPWLPVAAREAAAGFVQRSLLPFLSVPSSXXXXXXXXXXXXXXXXXXXXXXXXXGKKVRLVGNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGGRGR-DGVGPAAPGNPFA-RPAERPVGGSSGAGDGSGWPQTPWERRLGT-GSAAPRLPPAGGAGSEAWFDQFEFTRVSGAAGRPLVSSA---------------MGRASRGARGTAAQ------REAVARPSASSIEECGLGGARTGFAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAW-------RPRGSVVERWREMQRKQMAEPGTASKSG-TNTQQQXXXXXXXXXXXXXXXXXQADRRA--QTGAKAAFAAXXXXXXXXXXXXXXXGARAPNXXXXXXXXXXXXXXXXXXXXTEASSMELHRLVLSSWTVSELLDAQ-RSQRHGXXXXXXXXXXXFQGAGDG---GRDTRLSSSLWLSKVPTRFQSVEQYLDIFRGLLLEEIFATLVAGLGGSTDGRGXXXXXXXACGSGGSETLRVAGFVESKHGGFSHVTLVASDGGG 4812
+WEYSSR+PSEVL+A+ERQT + G GA A F RG R PPNEA+ KK EMLP+LV+SA P+ GV V G++ G D G A + ++++S L +AD AL FLS EIA+LSA A +G RR++AL +A LGVLE CY G + + D D L PE WPWNAAA XXXXXXXXX W+HPSWPV SL XXXX VVDRAARVV+LVLR+HAGAAWR ALSALRP S A +G E E V+PLCGPLLERICL+LPLMDLPVRVHAAVF HGWLSLLPCGDSAIRAAEG GG A+RVLA LHSG +SQF+KLFVPYVQGLT+ VK RG VAP I Q LLA +PAARAALEEL+S SVF S G ++GDLR LL R PPDCARACF AVPQALGAMAAAGPH +KSW PLFQA+ VLGCAVLLP A + ELWE LEAVWEF+FLQ LWPLLTGPV + RRP LADGFY SRSLWL LL+WVS WLP AREAAA FVQRSLLPFL SS K +RLVG+ R R R D P AP NPFA A R GGSS A SGW +TPWE RLG SA P L AG S + Q ++ + AA P V + +A G TA R++ R + +S E LG A A XXXXXXX RPRGSVVERWREMQR+Q+ E S +Q + XXXXXXXXXXXXXXX++ R A QT +K A AA G EAS+ ELH+LVLSSWTV EL A +S R G FQG G GR + SSSLWLSKVPTRFQSVEQYL++FRGLLL+EIFATLVA L DG G XXXXXX G + TLRVA VE GGF HVTLVA DGGG
Sbjct: 1 MWEYSSRQPSEVLEALERQTSY---GDGADTADF----RGTGR--RMPPNEAIQKKVFEMLPLLVSSASAVDRPSGGTGVGTAVYGNQEVGGEADHPGA------AARRVDDAAAAASVLPVADAALSFLSREIASLSAVAPE-ARRGAHGRRKLALAKAVLGVLENCYDGSAGGGASDDDYDSDVLGPESWPWNAAA-----XXXXXXXXXSGAWYHPSWPVRSLPXXXXXXXXXXXXXXXXXXXXXXXNGSTAVAVVDRAARVVQLVLREHAGAAWRVALSALRPLPSASSXXXXXASQSSGRMEDDE----CVVPLCGPLLERICLELPLMDLPVRVHAAVFEVHGWLSLLPCGDSAIRAAEGRGG-PAASRVLAALHSGTMSQFVKLFVPYVQGLTEIVKNRG----------VAPSILQALLATIPAARAALEELVSRSVF---------------SDGGRRGDLRLLLGRFPPDCARACFQAVPQALGAMAAAGPHFSLKSWSPLFQAVGVLGCAVLLPEASAGDXXXXXXXXXXXXXXXXXXWEECELWEVLEAVWEFIFLQVGY-------------------------------LWPLLTGPVAQRRRPRLADGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHA-SSCSSAANGGDDRGACGDDDPSVGVSPRKTIRLVGDKLCAVEGDGGSAWALSSGDPEEADLLAVLKSAAAAATTEGTAVDPCSPPAAP---RGAARSRVDPHSPEAPRNPFALSAARRGNGGSSAA---SGWSRTPWEDRLGARNSATPSLESAGRPLSGSALAQVTYSSPA-AAPEPTVRTPGVILGSHYPRAGGNDFSQAREGGGSTAGDGXXXGFRDSRGRSTTASTEGGSLGVRPEKTASRAVSNWTANEDGELGSSSGARSRKTYVTAAEAAAARVSEAKXXXXXXXXXXXXXXXXARPRGSVVERWREMQRRQVGETTEVVASAPAASQSRSLXXXXXXXXXXXXXXXRSPRNAAVQTTSKEARAAFATAAQAAARR----GDSPDGGNGSLAITAARAATLDYASLAEASATELHKLVLSSWTVPELFAASTKSARSGGR---------FQGPKRGHEVGRSS--SSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAAL----DGGGSXXXXXXXXGPPEAMTLRVASLVEGGKGGFGHVTLVADDGGG 1119
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Match: A0A6H5J6B2_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6B2_9PHAE) HSP 1 Score: 442 bits (1137), Expect = 1.300e-133 Identity = 326/598 (54.52%), Postives = 356/598 (59.53%), Query Frame = 1 Query: 5365 QATSDPTLVPVPTPPAR-PGSNTTTNPAGAANLGPPYPVDEASFTDACKLLASVEQSVYRGRAESGGRGDA-----AVDALAPAELLVRSLGCLASFRVTPELLTYHGRATAKRLKGLSKSEAWGPVVRAAAARLLRAWRATVNDGGS----SSGGNGTSXXXRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQPQSPPKLKPKRPSLVPAALWDRLSQEFNASQLTAIWAAAASQLEARQDRAASAAG--------TAATQPARVQAGLAAAAASYRTVGGGIV--------LLQGPPGTGKTRTILGVVSAILARREEKGDGAAGTGASAXXXXXXXXXXXXXXXXGMGTTLGVGARQKRPGVARRWVAAKTHQRVLVCAPSNGAVDELTQRLALETGGVWDHRGKAVAPRVVRLGRPSEDSAPRVKAVSLEFMVEERVKLHAKSTEARNAETKIREAYAQINEATRALRSGAAGGEAAGVSGLGSAENRRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQAR 7080
QATS+P+L P+P R PG++TT+N A L PPY VDEASFTDACK L+SVE S G++ +GG A A D P E L+RSLGCLASFRV PELLT HGR TAKRLK LSKSE WGP VR AAARLLRAWR V+ GG S S G XXXXXXXX XXXXXXXXX + Q + PKRPSLVPAALWDRLSQEFN SQL AIWAAAAS EA +D AA+A G TA R AA LLQGPPGTGKTRT+LGVVSAILARREEK D A+G G S GMGTTL ARQKRPGVA RWVAAKTHQRVLVCAPSNGAVDEL QRLALE+GGVWD RG A APRVVRLG+PSED+A RVKAVSLEFMVEERVKLHAKS EARNAETKIRE +A+I+EA RA+RSG G E G++G+GSAENR DALR L+VERG+IRRSLVSNAQAR
Sbjct: 4 QATSEPSLQPLPETAQRAPGNSTTSNNLWATKLAPPYLVDEASFTDACKRLSSVEDSALLGKSGAGGGSPATAAGLAADIAGPEESLMRSLGCLASFRVAPELLTSHGRGTAKRLKRLSKSEVWGPDVRNAAARLLRAWRGVVDVGGGATAYSKAATKRSQDEERGGAGSGXXXXXXXXGGAKAKVGAEQIVDRVRPAASTKPRLVGEKEQXXXXXXXXXGISSSGHKSPAPMPDAGSSSSDFSPKVTCPPEKQQKEQQQTPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREAHEDLAAAARGNDGPATPETAVLAERRAPVNHAAXXXXXXXXXXXXXXXXXXXXXLLQGPPGTGKTRTVLGVVSAILARREEK-DCASGGGRSGASAR------------GMGTTLAPEARQKRPGVAGRWVAAKTHQRVLVCAPSNGAVDELAQRLALESGGVWDQRGNATAPRVVRLGKPSEDAADRVKAVSLEFMVEERVKLHAKSAEARNAETKIRETHARIDEAGRAVRSGDVG-EVGGMAGIGSAENR-----------------------DALRSLDVERGKIRRSLVSNAQAR 564
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Match: A0A6H5J8A4_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8A4_9PHAE) HSP 1 Score: 322 bits (826), Expect = 2.530e-90 Identity = 259/561 (46.17%), Postives = 310/561 (55.26%), Query Frame = 1 Query: 7405 IRAFPSARFYGGRLSDAPCVREESS---QTQSQHATSSSTSSSLGPCFPPLLVVDVASGLERRVGSSYQNQLEASFVATFVDRLAAAASGSRHGRWGPVGSGG------------------GAVRVGVITPYRGQVQCIRQELGSSSSGSRWLKGGGGDGEVDVEVSTVDGFQGKEVDVVLFSCVRAPSSASGGHXXXXXXXXXXXXXXIGFLADQRRMNVAITRARLSLVVLGNARRLSSDGNWRALVEHAASRER----VIESRGGDG-------GGEICARLEARAAS---AAKRSLSPKGQDGDRRVRRNTPDVGSARVGGAAPHGDDPPPTKKRVEAPRGQRGSATGHPQEGD----------RTAERGPLYRSRD-----GDREGRRQADDGTGGTGRQRKLARRRSAGGETRSPPTPAEDVAGRDRDRAPTHRRRLQKRPRVAGSEPACGGS------GGRGTRSAKRVPSSTKLLPDSSKPVNEGFLAGLLGSLNSNAEGIASGKDHAFRQGLRGGEDEARKRAAAGPGLGGANITELSRPRELKQAPAATYA 8919
+ A SARFY GRL+DAPCVR++++ + S AT LGPCFPP L+VDV+SG ERR GSSYQN EASFV+ F+ RL A SG R GR V +GG G VRVG+ITPYRGQV CI+QEL S G R LKGG DG VD EVSTVDGFQGKEVDVVLFSCVRAPSS XXXXXXXIGFLADQRRMNVA+TRAR SL++LGN RLSSD W ALV+H+ SRER V+++R G G +CARLE AA RS +G ++ R + A VG G D K ++APR GS TG GD R A D D+ Q +GG+G++RK + R GG+ P E+ RDR P + + Q+ G++P GS GG R KR + + GFL GLL SL+SNA GIASGK+H FRQGLRGGED A P LGGA +TELSRP E +QAP+A ++
Sbjct: 9 VPAGSSARFYNGRLTDAPCVRDQAAIPAPSPSSEATGPLALPPLGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVA--SGLRSGRG--VKAGGXXXXXXXXXXXXRDREKSGVVRVGIITPYRGQVHCIQQEL-SGGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXX---------XXXXXXXIGFLADQRRMNVALTRARCSLIILGNVGRLSSDATWNALVDHSKSRERLEPEVVKARTSGGXXXXXXDGEALCARLEKAAAGKKGGRDRSGDRQGTGRNQAGRGGRGEADDA-VGSRVADGSD----GKEIQAPRRAAGSRTGGHVRGDGSGGINVPDDRAAAAAVPPAVTDIEEHCADKRANPQHKPESGGSGQRRKPSWR---GGDEVRPSARLEESM---RDRPPVEKHQ-QRHEEAGGAKPTPRGSACKRPDGGAANRPQKRARVYGQEAAKRVSTPDSGFLGGLLSSLSSNAGGIASGKEHDFRQGLRGGEDXXXXXXXAAPRLGGARVTELSRPVEREQAPSARHS 543
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Match: W7TPV4_9STRA (Helicase sen1 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPV4_9STRA) HSP 1 Score: 306 bits (785), Expect = 1.580e-79 Identity = 245/684 (35.82%), Postives = 334/684 (48.83%), Query Frame = 1 Query: 6127 PSLVPAALWDRLSQEFNASQLTAIWAAAASQLEARQDRAASAAGTAATQPARVQAGLAAAAASYRTVGGGIVLLQGPPGTGKTRTILGVVSAILARREEKGDGAAGTGASAXXXXXXXXXXXXXXXXGMGTTLGVGARQKRPGVARRWVAAKTHQRVLVCAPSNGAVDELTQRLALETGGVWDHRGKAVAPRVVRLGRPSEDSAPRVKAVSLEFMVEERVKLHAKSTEARNAETKI-------REAYAQINEATRA-LRSGAAG---GEAAGVSGLGSAENRRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRLLLFQVVCSTLSGCGSAPLVEAVSLSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRASRLNLEVSLFERLEKAGYPVHMLTVQYRMHPEIRAFPSARFYGGRLSDAPCVREESSQTQSQHATSSSTSSSLGPCFPPLLVVDVASGLERRVGSSYQNQLEASFVATFVDRLAAAAS---GSRHGRWGPVGSGGGAVRVGVITPYRGQVQCIRQELGSSSSGSRWLKGGGGDGEVDVEVSTVDGFQGKEVDVVLFSCVRAPSSASGGHXXXXXXXXXXXXXXIGFLADQRRMNVAITRARLSLVVLGNARRLSSDGNWRALVEHAASRERVIESRGGD 8136
PS VP LW L Q+FNA QL AI A+ +A G + LLQGPPGTGKTR I+G++SAI+ R S A RP + + + R+LVCAPSNGA+DE+T RL + G+ + G+ P +VRLG D+ VK VSLE +E + + + E A+ ++ R+A +A + L G G GE L AE R+ R R ++ AK+RR + L+ LE E+ RIR +L+ +A+ ++ STLS S+ L EAV+ + +GF TV++DEA QA EPSTLIPL GC+ LILVGDPRQLPATV+S + + SLFERLEK G+PVH+L VQYRM P I FPS FY +LS+AP + + + A P F V +V+S E + G++ N EA F + RL +H + VITPYR QV+ + + L G +G EVST+DGFQG+E +V++FSCVRA + GG IGFLAD+RRMNV +TRAR SL VL + L +D +WRA +E A R+ ++++ G D
Sbjct: 1933 PSHVPLKLWKSLQQQFNAPQLKAISASCFINAQAVHQ------------------------------GCEVTLLQGPPGTGKTRCIMGLLSAIMHSRP----------TSTYYPSHS-------------------ATNVRPALRVGYRHHQREARILVCAPSNGAIDEITMRL--QRTGLLNAEGQVFKPTLVRLGVVDPDAEEEVKTVSLESQLERALLTNFQKKEYDKADAEVLRLQRDERDAREIALDARKCRLDHGLHGRNEGEVEESEWLRKAEQRQ-------RISRSELYRAKRRRWECLKALEAEKSRIRNNLIRDAK--------IILSTLSTAASSQLAEAVTSTSRGFGTVVIDEAGQAVEPSTLIPLRYGCRNLILVGDPRQLPATVMSPVLQKYKYDRSLFERLEKGGHPVHLLRVQYRMRPPICRFPSQAFYHNKLSNAPAL-----EAAEEDADGDLKRYDRVPYFGAYRVFNVSSAREIKRGNAISNIEEAIFAVQLIARLRVEFPDLVAFKH--------------MAVITPYRAQVRLVEEHLRVRF---------GEEGSSLAEVSTIDGFQGREKEVIIFSCVRA--NPQGG--------------TIGFLADERRMNVGLTRARRSLFVLCHRASLWTDRSWRAFIEDAEERQSLVDTGGRD 2496
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Match: A0A5B7C6X9_DAVIN (Putative helicase MAGATAMA 3 isoform X1 n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5B7C6X9_DAVIN) HSP 1 Score: 258 bits (658), Expect = 1.220e-67 Identity = 212/614 (34.53%), Postives = 292/614 (47.56%), Query Frame = 1 Query: 6340 VLLQGPPGTGKTRTILGVVSAIL----ARREEKG--------------DGAAGTGASAXXXXXXXXXXXXXXXXGMGTTLGVGARQKRPGVARRWVAAKTHQRVLVCAPSNGAVDELTQRLALETGGVWDHRGKAVAPRVVRLGRPSEDSAPRVKAVSLEFMVEERVKLHAKSTEARNAETKIREAYAQINEATRALRSGAAGGEAAGVSGLGSAENRRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRLLLFQVVCSTLSGCGSAPLVEAVSLSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRASRLNLEVSLFERLEKAGYPVHMLTVQYRMHPEIRAFPSARFYGGRLSDAPCVREESSQTQSQHATSSSTSSSLGPCFPPLLVVDVASGLERRVGSS--YQNQLEASFVATFVDRLAAAASGSRHGRWGPVGSGGGAVRVGVITPYRGQVQCIRQELGSSSSGSRWLKGGGGDGEVDVEVSTVDGFQGKEVDVVLFSCVRAPSSASGGHXXXXXXXXXXXXXXIGFLADQRRMNVAITRARLSLVVLGNARRLSSDGNWRALVEHAASRERVIE 8121
VL+QGPPGTGKT+TILGV+SAIL AR KG D G ++ + +P V + K RVLVCAPSN A+DE+ RL L TG + D +A P++VR+G S V+AVSL+++VE+++ AG+ S KQ++ A R +E+ IR SL+ A +V STLS GS+ S S +GFD VI+DEA QA EP+TLIPL+ GCK++ LVGDP QLPATVIS A + +SLF+R ++AGYPV ML QYRMHPEIR+FPS FY L D P V ++++++ ++ CF P D+ G E + S + N E FV +L R+ + S + R+ +I+PYR QV+ RQ + + G + + V+++TVDGFQG+E DV +FSCVRA IGF+AD RRMNV ITRAR +++V+G+A L D +W+ LVE A R + +
Sbjct: 268 VLIQGPPGTGKTQTILGVLSAILHATPARVHSKGKLCEIKRGPALPIQDKYNHWGKASPWLTGINPRDAKMPENADDGFFPTTGNELKPEVVNS--SRKYRVRVLVCAPSNSALDEIVLRL-LNTG-IRDENDRAYNPKIVRIGLKPHHS---VQAVSLDYLVEQKL---------------------------------------AGMESQNSD---------------------KQKQGRAERDIEI----IRSSLLDEAA--------IVFSTLSFSGSS----LFSKSNRGFDVVIIDEAAQAVEPATLIPLANGCKQVFLVGDPVQLPATVISPIAEKFGYGMSLFKRFQRAGYPVKMLKTQYRMHPEIRSFPSREFYAEALEDGPDVEDQTTRSWHKYR-----------CFRPFCFFDIHEGKESQPSGSGSWVNNDEVEFVLLMYLKLVT--------RYPELKS---SSRLAIISPYRHQVKLFRQRIRDTF---------GMESDKIVDINTVDGFQGREKDVAIFSCVRASKDKG-----------------IGFVADFRRMNVGITRARSTVLVVGSAYSLKKDKHWKNLVESAEGRNSLFK 750
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Match: A0A5D6XT56_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XT56_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.550e-67 Identity = 243/780 (31.15%), Postives = 336/780 (43.08%), Query Frame = 1 Query: 6121 KRPSLVPAALWDRLSQEFNASQLTAIWAAAASQLEARQDRAASAAGTAATQPARVQAGLAAAAASYRTVGGGIVLLQGPPGTGKTRTILGVVSAILARR------------------------------EEKGDGAAGTGAS-------------AXXXXXXXXXXXXXXXXGMGTTLG---------------VGARQKRPGVARRWVAA-----------------KTHQRVLVCAPSNGAVDELTQRLALETGGVWDHRGKAVAPR---------------VVRLGRPSEDSAPRVKAVSLEFMVEERVKLHAKSTEAR---NAETKIREAYAQINE-ATRALRSGAAGGEAAGVSGLGSAENRRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRLLLFQVVCSTLSGCGSAPLVEAVSLSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRASRLNLEVSLFERLEKAGYPVHMLTVQYRMHPEIRAFPSARFYGGRLSDAPCVREESSQTQS---QHATSSSTSSSLGPCFPPLLVVDVASGLERRVGSSYQNQLEASFVATFVDRLAAAASGSRHGRWGPVGSGGGAVRVGVITPYRGQVQCIRQELGSSSSGSRWLKGGGGDGEVDVEVSTVDGFQGKEVDVVLFSCVRAPSSASGGHXXXXXXXXXXXXXXIGFLADQRRMNVAITRARLSLVVLGNARRLSSDGNWRALVEHAASRERVIESRGGDGGGEICARLEA 8169
+ P +PAALWD + ++N SQL ++ + GI LLQGPPGTGKT+TI+G++S LA + G A GAS A TT+ + AR+ G + AA + VL+CAPSNGAVDEL R+ T G+ D G+ V R VVRLG P ED++ VKAV L +++ + +H K+ + R +A+ +R++ ++ A A + + G A GL + + + ++RRLR +V R ++ +L+S A ++ TLS GS PL L R GFD +I+DEA QA E STL+P+ R++LVGDP+QLPATV S A+ + SLFER+ ++G ML VQYRMHP +R FPS +FYGG L+D P V E Q Q+ P F P L+ DV + E + S N++EA F L + +R W VG ++PY+ QV+ +R+ L S+ V VEV+TVDGFQG+E DV++FSCVRA S GG IGFL D RR+NVAITRAR L V+G+ L D W ALV A R V+ +RG E+ RLE+
Sbjct: 1504 RAPRFLPAALWDAIKAQYNQSQLQSVHSV------------------------------------LNNYSVGISLLQGPPGTGKTKTIMGLLSGFLALQPPALAIMPSSTSSALRSSSSAAPTPRGGELSSSGQPAREPGASDQRPTFSLSAVTSAMGSILRRSDADATAAAPKRTTIQALKNTTTVRSRLEDKLAARKPTTGASGGSAAASLVVRQRVVPSNPVARVRRSNHVLLCAPSNGAVDELVLRIV--TDGLMDSTGRVVKVRAPSVHPEALSDEWLSVVRLGNPGEDASDAVKAVCLPQIIKRELDIHPKAVQLRALQDAQQTLRKSIRDFHQRAKEAAEAASDGAPRASRKGLAQTHAQLTKCSGEVRRLRDEVFAL--------------RTKMTAALLSRAS--------IIACTLSKAGSGPLA---GLPR-GFDALIIDEAAQAVELSTLVPIRERVARVVLVGDPKQLPATVKSVVAASARYDRSLFERIAESGVAPSMLRVQYRMHPFLREFPSTQFYGGLLTDGPSVMERVRQVCPGVYQY-----------PAFQPFLLYDVTNSSEEDMHGSKFNRVEAQFCVDLCRTLFETCADARKQHWS----------VGFVSPYKEQVRVLRRALSQSAIPQ----------SVAVEVNTVDGFQGREKDVIVFSCVRA--SKRGG---------------IGFLKDVRRLNVAITRARFCLFVVGHVNTLVRDETWAALVRSAEDRRLVVRTRGASFP-EVARRLES 2170
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Match: UPI000D1C26AE (probable helicase DDB_G0274399 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C26AE) HSP 1 Score: 251 bits (641), Expect = 2.990e-67 Identity = 216/613 (35.24%), Postives = 302/613 (49.27%), Query Frame = 1 Query: 6337 IVLLQGPPGTGKTRTILGVVSAILARREEKGDGAAGTGASAXXXXXXXXXXXXXXXXGMGTTLGVGARQKRPGVARRWVAAKTHQRVLVCAPSNGAVDELTQRLALETGGVWDHRGKAVAPRVVRLGRPSEDSAPRVKAVSLEFMVEERVKLHAKSTEARNAETKIREAYAQINEATRALRSGAAGGEAAGVSGLGSAENRRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRLLLFQ---VVCSTLSGCGS---APLVEAVSL-----SRKGFDTVIVDEACQATEPSTLIPLSL---GCKRLILVGDPRQLPATVISQRASRLNLEVSLFERLEKAGYPVHMLTVQYRMHPEIRAFPSARFYGGRLSDAPCVREESSQTQSQHATSSSTSSSLGPCFPPLLVVDVASGLERRVGS--SYQNQLEASFVATFVDRLAAAASGSRHGRWGPVGSGGGAVRVGVITPYRGQVQCIRQELGSSSSGSRWLKGGGGDGEVDVEVSTVDGFQGKEVDVVLFSCVRAPSSASGGHXXXXXXXXXXXXXXIGFLADQRRMNVAITRARLSLVVLGNARRLSSDGNWRALVEHAASRERVIESR 8127
I L+QGPPGTGKTRTILG+VSA+LA E+ AG + T R+LVCA SN AVDEL R++ GV+++ G P +VR+G + + AV ++ +V +R+ A++ NA + +E ++++E +++ AA E G+ + + L Q R L +++ + R L G S QA +L + + VV +TLSGCG + L+E ++ + FD VI+DEA QA EPSTLIPL L + IL+GDP+QLPATV+S ASRL + S+FER +K GYPV MLT QYRMHPEIR+FPS +YGG+L D V H S+T CF P D+ G ER GS S N EA F+ + L R+ G R+GVITPY+ Q + +++ + S SG ++V+TVD FQG+E D+++ S VRA S +GFLAD RRMNVA+TRA+ SL V+GNAR L + +W+AL++ R V R
Sbjct: 81 ISLIQGPPGTGKTRTILGIVSALLAHANEE----AGKAEEHEMLDVLTDKHQTKFRDKLKAT-----------------------RILVCAQSNAAVDELVTRISKH--GVYNYDGGTYWPSIVRVGDTKRVHSQAM-AVHIDRLVAKRM---AENAGVHNAHSP-QELRSKLDEVLGNMQALAAPAEVESQDGIPKLD-KLAGLQEQQRLLLSELIKVENREHGFLMG----------SNRKKKQAMKLEVLREADVVLTTLSGCGGHIYSTLMEFIATRDAQAAEMLFDAVIIDEAAQAVEPSTLIPLQLLKATRGKCILIGDPKQLPATVLSVPASRLLFDCSMFERFQKHGYPVSMLTTQYRMHPEIRSFPSTHYYGGQLKDGSTVL---------HGNRSATFHR-ERCFEPYRFFDIRDGQERP-GSMQSLTNPDEAEFIFQLLRVLK-----ERYPEEVRPG------RIGVITPYQEQRKVLQENMRSLHSG--------------IDVNTVDSFQGREADIIVLSTVRASFGDS--------------QAGVGFLADVRRMNVALTRAKFSLWVVGNARTLERNPDWKALLQDCRRRGLVSSVR 598
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Match: A0A1Y1Z4H4_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z4H4_9FUNG) HSP 1 Score: 255 bits (652), Expect = 1.060e-66 Identity = 201/606 (33.17%), Postives = 294/606 (48.51%), Query Frame = 1 Query: 6334 GIVLLQGPPGTGKTRTILGVVSAILARREEKGDGAAGTGASAXXXXXXXXXXXXXXXXGMGTTLGVGARQKRPGVARRWVAAKTHQRVLVCAPSNGAVDELTQRLALETGGVWDHRGKAVAPRVVRLGRPSEDSAPRVKAVSLEFMVEERVKLHAKSTEARNAETKIREAYAQINEATRALRSGAAGGE--------AAGVSGLGSAENRRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRLLLFQVVCSTLSGCGSAPLVEAVSLSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRASRLNLEVSLFERLEK-AGYPVHMLTVQYRMHPEIRAFPSARFYGGRLSDAPCVREESSQTQSQHATSSSTSSSLGPCFPPLLVVDVASGLER-RVGSSYQNQLEASFVATFVDRLAAAASGSRHGRWGPVGSGGGAVRVGVITPYRGQVQCIRQELGSSSSGSRWLKGGGGDGEVDVEVSTVDGFQGKEVDVVLFSCVRAPSSASGGHXXXXXXXXXXXXXXIGFLADQRRMNVAITRARLSLVVLGNARRLSSDGNWRALVEHAASRERVIE 8121
G L+QGPPGTGKT+TILG++ A+L+ R + R + ++VLVCAPSN AVDEL +RL G+ D G A P+VVR+G E K +SLE +VE+ ++++ +E ++ + A + +E +R+ + + + E + QLN++ L + R+ + R L++ + +IR +++ A +VCSTLSG G E ++ F+TVI+DEA Q+ E S+LIPL GC+R +LVGDP QLP TV+SQ A+ + E SLF R++ VH+L++QYRMHPEI AFPS FYG +L D P + + +TQ H F P ++V SG E G S N EA V L A R+G+ITPY+ Q++ +R+ S+ G + ++ +TVDGFQG+E D+++FSCVRA + G IGFLAD RRMNV +TRAR SL +LGN++ L + WR LVE A R+ ++
Sbjct: 335 GFSLIQGPPGTGKTKTILGLIGAVLSSRNPD------------------------------------------KIETRTEETSSSKKVLVCAPSNAAVDELVKRLK---DGIRDSNGAAFKPKVVRIGI-FESINSSAKEMSLEHLVEK--EMNSPDSEYSKSKKNLNNASSLASELKEKMRAIVKERDELKDMMSRSTDAFAIADMEAKVKQLNSKRWNLAKQLDGENDRKSTSYRALDIAKRKIRTKILTEAD--------IVCSTLSGSGH----EQLTSLAVDFETVIIDEAAQSIELSSLIPLKYGCRRCVLVGDPNQLPPTVLSQVAASYSYEQSLFVRIQNHCPDAVHLLSIQYRMHPEISAFPSKLFYGSKLRDGPNLAQI--KTQKWHENRK---------FAPYNFLNVHSGREEIGRGKSLYNTKEAEIAVALVHHLCKAFPTINFSN-----------RIGIITPYKQQLRELRRRF-ESAFGQTITQ--------VIDFNTVDGFQGQEKDIIIFSCVRAGNRKWHG---------------IGFLADIRRMNVGLTRARYSLFILGNSKSLLENKYWRPLVEDAQERKCFVD 834 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig95.16963.1 >prot_C-linearis_contig95.16963.1 ID=prot_C-linearis_contig95.16963.1|Name=mRNA_C-linearis_contig95.16963.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=3045bp ARGSSRVRARVRLGGTGMDVEVISVDDEDEEIFSQEAQEQQRPAVVDLTRback to top mRNA from alignment at C-linearis_contig95:77080..102551- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig95.16963.1 ID=mRNA_C-linearis_contig95.16963.1|Name=mRNA_C-linearis_contig95.16963.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=25472bp|location=Sequence derived from alignment at C-linearis_contig95:77080..102551- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig95:77080..102551- >mRNA_C-linearis_contig95.16963.1 ID=mRNA_C-linearis_contig95.16963.1|Name=mRNA_C-linearis_contig95.16963.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=18270bp|location=Sequence derived from alignment at C-linearis_contig95:77080..102551- (Chordaria linearis ClinC8C monoicous)back to top |