Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Exons | 1 |
| Model size | 320 |
| Cds size | 318 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930802.0544739-CDS-C-linearis_contig94:672443..672761 | 1622930802.0544739-CDS-C-linearis_contig94:672443..672761 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig94 672444..672761 + |
| 1690881257.1541486-CDS-C-linearis_contig94:672443..672761 | 1690881257.1541486-CDS-C-linearis_contig94:672443..672761 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig94 672444..672761 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig94.16960.1 >prot_C-linearis_contig94.16960.1 ID=prot_C-linearis_contig94.16960.1|Name=mRNA_C-linearis_contig94.16960.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=106bp
HFRVPSPASAFTEVSKCRCCYSRAKIYSCIPDQMQRCMFKSDRIRYLTTW
KTKRYVRLRVPKVCLQFVLFLVPSTTSLGMRVVIAFTLRTVPISAECRRQ
DNRQI* back to topmRNA from alignment at C-linearis_contig94:672444..672761+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig94.16960.1 ID=mRNA_C-linearis_contig94.16960.1|Name=mRNA_C-linearis_contig94.16960.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=318bp|location=Sequence derived from alignment at C-linearis_contig94:672444..672761+ (Chordaria linearis ClinC8C monoicous)
CATTTTCGAGTGCCGTCTCCTGCCTCTGCTTTTACTGAAGTTAGTAAGTG
TAGGTGCTGCTATTCCCGTGCAAAAATATATTCCTGTATTCCCGACCAAA
TGCAGAGATGCATGTTCAAGTCAGATAGAATACGATACCTTACTACTTGG
AAAACAAAGAGATACGTACGTCTAAGAGTACCCAAGGTATGTCTACAGTT
TGTGTTGTTTTTAGTGCCAAGTACGACGAGTTTAGGTATGCGTGTTGTTA
TTGCCTTCACATTAAGAACCGTTCCGATCTCTGCTGAGTGCCGACGACAG
GATAACCGACAGATATAA back to topCoding sequence (CDS) from alignment at C-linearis_contig94:672444..672761+ >mRNA_C-linearis_contig94.16960.1 ID=mRNA_C-linearis_contig94.16960.1|Name=mRNA_C-linearis_contig94.16960.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=636bp|location=Sequence derived from alignment at C-linearis_contig94:672444..672761+ (Chordaria linearis ClinC8C monoicous)
CATTTTCGAGTGCCGTCTCCTGCCTCTGCTTTTACTGAAGTTAGTAAGTG
TAGGTGCTGCTATTCCCGTGCAAAAATATATTCCTGTATTCCCGACCAAA
TGCAGAGATGCATGTTCAAGTCAGATAGAATACGATACCTTACTACTTGG
AAAACAAAGAGATACGTACGTCTAAGAGTACCCAAGGTATGTCTACAGTT
TGTGTTGTTTTTAGTGCCAAGTACGACGAGTTTAGGTATGCGTGTTGTTA
TTGCCTTCACATTAAGAACCGTTCCGATCTCTGCTGAGTGCCGACGACAG
GATAACCGACAGATATAACATTTTCGAGTGCCGTCTCCTGCCTCTGCTTT
TACTGAAGTTAGTAAGTGTAGGTGCTGCTATTCCCGTGCAAAAATATATT
CCTGTATTCCCGACCAAATGCAGAGATGCATGTTCAAGTCAGATAGAATA
CGATACCTTACTACTTGGAAAACAAAGAGATACGTACGTCTAAGAGTACC
CAAGGTATGTCTACAGTTTGTGTTGTTTTTAGTGCCAAGTACGACGAGTT
TAGGTATGCGTGTTGTTATTGCCTTCACATTAAGAACCGTTCCGATCTCT
GCTGAGTGCCGACGACAGGATAACCGACAGATATAA back to top
|