Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 207 |
| Cds size | 207 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930796.5423412-CDS-C-linearis_contig93:528386..528543 | 1622930796.5423412-CDS-C-linearis_contig93:528386..528543 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig93 528387..528543 + |
| 1690881254.8428805-CDS-C-linearis_contig93:528386..528543 | 1690881254.8428805-CDS-C-linearis_contig93:528386..528543 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig93 528387..528543 + |
| 1622930796.5607164-CDS-C-linearis_contig93:529557..529607 | 1622930796.5607164-CDS-C-linearis_contig93:529557..529607 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig93 529558..529607 + |
| 1690881254.8573267-CDS-C-linearis_contig93:529557..529607 | 1690881254.8573267-CDS-C-linearis_contig93:529557..529607 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig93 529558..529607 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig93.16922.1 >prot_C-linearis_contig93.16922.1 ID=prot_C-linearis_contig93.16922.1|Name=mRNA_C-linearis_contig93.16922.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=69bp
ARTSRRRTERAASEADESGRRSGRGGDGFDGRERGDGSDSQAGPDKCRSR
NTVRGHLERAGFELGPLRE back to topmRNA from alignment at C-linearis_contig93:528387..529607+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig93.16922.1 ID=mRNA_C-linearis_contig93.16922.1|Name=mRNA_C-linearis_contig93.16922.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1221bp|location=Sequence derived from alignment at C-linearis_contig93:528387..529607+ (Chordaria linearis ClinC8C monoicous)
GCCCGAACCAGCCGGCGGAGAACAGAGCGAGCAGCCAGCGAAGCGGACGA
AAGCGGACGCAGGAGCGGGCGGGGCGGTGACGGTTTCGACGGTCGCGAGC
GTGGCGACGGCTCCGACAGCCAAGCGGGCCCTGACAAATGCAGATCCCGA
AACACAGGTGAGAGATGTTTCTCCCCGCTTGTTTTTAGCGCTTCACTAGG
CGACCGCCGCGATAGTTTCACCGCGACCACAGCGCCTTAGGGCCGTGGGG
GGGCACACTGGGTACAGTTCCGCGCGGTCGATAGATTTTGGTTCGAGGCG
GCGGTCGGCCACGCCACACCCTTTTTCTTTTGTTTGATTTTCGAAATACG
TGTGTTGTACAGGTCAATTACGCCCAAAACGTTTTCTTTTTTCTTTCCCG
CAAAAAATGTTTGCTCACCGCTGCGGCGCACCCCCCCGCGCTTTTCCCGC
ACCCGCAACAGGCGCCCACGTTTTCCCATTGCCGCGGACGCCGCCCAATC
CTAGCCTAGCCGCACCCCACACACCGTGTTATCCTCACACACCAGCCCCG
TTTTTTTTTCACCATGGGCAGTAGGAATCTTGCGGCAGTGTGTAAATACA
CGGCAGTAGGCTAAAACACGCACAGCAGTTGCCAAAACGTGTCCGTCGCC
GCACACAATCAACGCAAAACATAAGCACGAACGCACGCCCATTTTCTCTC
GACAAAGTGTACGTATTTTTAGCCTCACACACACACCTCTCATCGCTGTC
GTCGCACACAGACCAATCGATGTTTCTCCTTCATTTCCCTTTTACACGGC
ATGATCACACGCCCCCCGATTTTCCCCGGTGTTCTCCTGCCCTCTCTTTT
ACACGGCACCAGCACACGCCCTCCCACCATTTTCCTTTTTTTACACGGCG
AGCTCACAGGCACTCTTTTTCTTGCCATCCCTCTTTTTTACACGGCGCGC
AATTTTACACGGAACCGGCTACATCACAAGCTTTTTCGCCCTTTTCCTCT
TTACTCGGCTCCAGCCCACGCACTCCGCATTCTCACCCCCCCTCCCGCCT
TTTTTCCCTCACCTTTACACGGCGCCGCCACACACTTTCCACCTTCTTTC
CATCACACGGAACGCGCACATGCCCACCGACTCCCCCCCTTTACCCCTGT
TTCACCGCCCCGATTCCCAAGTTCGCGGGCACCTGGAACGGGCTGGTTTC
GAGCTCGGCCCACTTCGAGAA back to topCoding sequence (CDS) from alignment at C-linearis_contig93:528387..529607+ >mRNA_C-linearis_contig93.16922.1 ID=mRNA_C-linearis_contig93.16922.1|Name=mRNA_C-linearis_contig93.16922.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=414bp|location=Sequence derived from alignment at C-linearis_contig93:528387..529607+ (Chordaria linearis ClinC8C monoicous)
GCCCGAACCAGCCGGCGGAGAACAGAGCGAGCAGCCAGCGAAGCGGACGA
AAGCGGACGCAGGAGCGGGCGGGGCGGTGACGGTTTCGACGGTCGCGAGC
GTGGCGACGGCTCCGACAGCCAAGCGGGCCCTGACAAATGCAGATCCCGA
AACACAGGCCCGAACCAGCCGGCGGAGAACAGAGCGAGCAGCCAGCGAAG
CGGACGAAAGCGGACGCAGGAGCGGGCGGGGCGGTGACGGTTTCGACGGT
CGCGAGCGTGGCGACGGCTCCGACAGCCAAGCGGGCCCTGACAAATGCAG
ATCCCGAAACACAGTTCGCGGGCACCTGGAACGGGCTGGTTTCGAGCTCG
GCCCACTTCGAGAATTCGCGGGCACCTGGAACGGGCTGGTTTCGAGCTCG
GCCCACTTCGAGAA back to top
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