mRNA_C-linearis_contig93.16919.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Match: UPI001F5EE731 (uncharacterized protein LOC124806268 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5EE731) HSP 1 Score: 92.0 bits (227), Expect = 2.880e-19 Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 3 Query: 345 ALVLDASEVAINSSWQTDFNWACCSTYKGRMTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSRDGLQVMADRGLNSMPPSLVREGIHYTAPPFKRRRDAQFTNNADMDSTWEVVNLRIHVERAIGAMKQWTILDTKL 800 ++++D SE+ I + D +CCS YK T K LVGIT GAI ++ Y GR +DV +V+ +++ ++ G QV+ADRG ++PPS +R + Q T+N D+ T ++ N+RI+VE+AIG MK + IL +L Sbjct: 10 SIIIDCSELFIETPSSLDTAASCCSNYKHHYTVKYLVGITPNGAIFFLSNCYGGRASDVFIVKDCGILKFLQPGD------QVIADRGFLAIPPS--------------KRTNLQMTSN-DVRETSKIANVRIYVEQAIGRMKNFRILKNEL 140
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Match: A0A8B6C2M9_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6C2M9_MYTGA) HSP 1 Score: 94.7 bits (234), Expect = 4.770e-19 Identity = 60/170 (35.29%), Postives = 94/170 (55.29%), Query Frame = 3 Query: 282 SRDEVEKYAPNDFIRQGLRSVALVLDASEVAINSSWQTDFNWACCSTYKGRMTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSRDGLQVMADRGLNSMPPSLVREGIHYTAPPFKRRRDAQFTNNADMDSTWEVVNLRIHVERAIGAMKQWTILD 791 +RD++++Y P+ + + G V ++D +EV N A S YK R T K+LV T GG +S+V A G M+DVE+VR ++++ G +VMAD+G N+ L+ + + P F R+ + QF + ++ +T E+ N RIHVER IG MK + IL Sbjct: 118 TRDQLDQYYPDCYSKYG--KVTAIIDCTEVQTERPSLDSTNSALYSNYKSRHTYKVLVACTPGGTVSFVSHATGGDMSDVELVRRCGILDLFEEGD------KVMADKGFNNKDDFLLGD-VELIIPAFARK-NIQFRESKNISNT-EISNARIHVERVIGRMKDFKILQ 276
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Match: UPI00148A4C40 (uncharacterized protein LOC117680363 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A4C40) HSP 1 Score: 95.5 bits (236), Expect = 1.260e-18 Identity = 64/176 (36.36%), Postives = 98/176 (55.68%), Query Frame = 3 Query: 276 FASRDEVEKYAPNDFIRQGLRSVALVLDASEVAINSSWQTDFNWACCSTYKGRMTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSRDGLQVMADRGLNSMPPSLVREGIHYTAPPFKRRRDAQFTNNADMDSTWEVVNLRIHVERAIGAMKQWTILDTKLN 803 F SRD +++ P+ F + ++ ++LD +E+ I S S YK T K LVGITH G IS+V E + GR++D +++ L++++ G DG VMAD+G ++ L ++G PPF R QFT ++ +T E+ LRIHVERAIG +K + I D L+ Sbjct: 329 FPSRDVIQRNMPSCF--KSFPNLRVILDCTEIFIQRSSSLVNQNQSFSNYKHHTTLKFLVGITHSGVISFVSEGFGGRVSDRQMIERTCLLDLIEEG----DG--VMADKGF-TIKDMLEKKGCTLNIPPF-RSSSNQFTTQ-EVLNTQEIAKLRIHVERAIGRVKNFHIFDGVLS 493
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Match: A0A8B6HG43_MYTGA (THAP-type domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6HG43_MYTGA) HSP 1 Score: 94.7 bits (234), Expect = 1.530e-18 Identity = 60/170 (35.29%), Postives = 94/170 (55.29%), Query Frame = 3 Query: 282 SRDEVEKYAPNDFIRQGLRSVALVLDASEVAINSSWQTDFNWACCSTYKGRMTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSRDGLQVMADRGLNSMPPSLVREGIHYTAPPFKRRRDAQFTNNADMDSTWEVVNLRIHVERAIGAMKQWTILD 791 +RD++++Y P+ + + G V ++D +EV N A S YK R T K+LV T GG +S+V A G M+DVE+VR ++++ G +VMAD+G N+ L+ + + P F R+ + QF + ++ +T E+ N RIHVER IG MK + IL Sbjct: 231 TRDQLDQYYPDCYSKYG--KVTAIIDCTEVQTERPSLDSTNSALYSNYKSRHTYKVLVACTPGGTVSFVSHATGGDMSDVELVRRCGILDLFEEGD------KVMADKGFNNKDDFLLGD-VELIIPAFARK-NIQFRESKNISNT-EISNARIHVERVIGRMKDFKILQ 389
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Match: UPI0014257389 (uncharacterized protein LOC117100854 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257389) HSP 1 Score: 94.4 bits (233), Expect = 2.160e-18 Identity = 65/181 (35.91%), Postives = 93/181 (51.38%), Query Frame = 3 Query: 255 QILAAAAFASRDEVEKYAPNDFIRQGLRSVALVLDASEVAINSSWQTDFNWACCSTYKGRMTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSRDGLQVMADRGLNSMPPSLVREGIHYTAPPFKRRRDA--QFTNNADMDSTWEVVNLRIHVERAIGAMKQWTILD 791 ++ A + S+DE KY P F + +V ++D +E+ I N S YK R T K LVGIT GAISY+ E G +D ++V+ +V+ G + MADRG N + L+R+ + PPF+R + QFT D T V N RIHVERAIG +K++ I+ Sbjct: 228 ELAAFIHWPSKDETLKYYPACFHKYK-GTVKCIIDCTEIQIERPSLAASNTQVYSQYKSRPTVKCLVGITPSGAISYISEPVGGNTSDKKIVQKTNIVDKFEPGDIC------MADRGFN-IQELLLRKQVKLIIPPFQRTTKSTNQFTITEDT-KTKTVANARIHVERAIGRLKEFQIMQ 399
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Match: UPI001CF25527 (uncharacterized protein LOC122958566 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF25527) HSP 1 Score: 93.6 bits (231), Expect = 2.370e-18 Identity = 75/225 (33.33%), Postives = 113/225 (50.22%), Query Frame = 3 Query: 129 RPVFHVDGIAHLTPHGCAVYAVRRA*DHWREDLYDLA*LSLSQILAAAAFASRDEVEKYAPNDFIRQGLRSVALVLDASEVAINSSWQTDFNWACCSTYKGRMTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSR---DGLQVMADRGLNSMPPSLVREGIHYTAPPFKRRRDAQFTNNADMDSTWEVVNLRIHVERAIGAMKQWTILDT 794 R F V +AHL +G + + R W LY L L QI + SR+ V P++F ++ + +++D +EV N S+YK +T K LVGI+ GGAI+++ + Y G ++D E+V MR+G LS+ D VMAD+G L+ G+ PPF D+Q + D+ T ++ +LRIHVERAI +K + I DT Sbjct: 134 RRGFSVQHLAHL--YGVSQSTISRIFIPWINFLY----LKLGQI---CIWPSREVVSSTMPSEF-KKKYPTTRVIIDCTEVRCEMPSSLLLNSELFSSYKNHVTLKALVGISRGGAITFISQLYTGSISDREIV--------MRSGLLSQQFDDKDSVMADKGFQIQ--DLLPLGVSLNIPPFLGG-DSQMSEE-DVIKTQQIASLRIHVERAINKIKNYHIWDT 336
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Match: UPI001F5E449C (uncharacterized protein LOC124816325 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5E449C) HSP 1 Score: 91.3 bits (225), Expect = 5.150e-18 Identity = 61/175 (34.86%), Postives = 96/175 (54.86%), Query Frame = 3 Query: 276 FASRDEVEKYAPNDFIRQGLRSVALVLDASEVAINSSWQTDFNWACCSTYKGRMTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSRDGLQVMADRGLNSMPPSLVREGIHYTAPPFKRRRDAQFTNNADMDSTWEVVNLRIHVERAIGAMKQWTILDTKL 800 F R+ +++ P F R+ ++++D SE+ I + D +C S YK T K LVGIT GAIS++ Y GR +DV +V+ +++ ++ G QV+ADRG + L + PP KR + Q T+N D+ T ++ N+RI+VE+AIG MK + IL +L Sbjct: 82 FPDRNNIKRNLPTMF-RKYYPKCSIIIDCSELFIETPSSLDTAASCWSNYKHHYTVKYLVGITPNGAISFLSSCYGGRASDVFIVKDCGILKFLQPGD------QVIADRGFK-IKELLAFYQCNLAIPPSKRT-NLQMTSN-DVRETSKIANVRIYVEQAIGRMKNFRILKNEL 246
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Match: UPI00148AC44B (uncharacterized protein LOC105344497 isoform X1 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AC44B) HSP 1 Score: 90.9 bits (224), Expect = 6.050e-18 Identity = 65/176 (36.93%), Postives = 95/176 (53.98%), Query Frame = 3 Query: 276 FASRDEVEKYAPNDFIRQGLRSVALVLDASEVAINSSWQTDFNWACCSTYKGRMTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSRDGLQVMADRGLNSMPPSLVREGIHYTAPPFKRRRDAQFTNNADMDSTWEVVNLRIHVERAIGAMKQWTILDTKLN 803 F SRD ++ P+ F + S+ ++LD +E+ I S S YK T K LVGIT G IS+V E + GR++D +++ L++++ G DG VMAD+G ++ L ++G PPF R QFT +D T E+ LRIHVERAIG +K + I D L+ Sbjct: 77 FPSRDVSQRNIPSCF--KSFPSLRVILDCTEIFIQRSSSLVNQNQSFSNYKHHTTLKFLVGITPFGVISFVSEGFGGRVSDRQMIERTCLLDLIEEG----DG--VMADKGF-TIKDMLEKKGSTLNIPPF-RSSSNQFTTQEVLD-TQEIAKLRIHVERAIGRVKNFHIFDGVLS 241
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Match: UPI00077A4930 (uncharacterized protein LOC107343141 n=3 Tax=Scleractinia TaxID=6125 RepID=UPI00077A4930) HSP 1 Score: 90.9 bits (224), Expect = 8.610e-18 Identity = 70/209 (33.49%), Postives = 103/209 (49.28%), Query Frame = 3 Query: 174 GCAVYAVRRA*DHWREDLYDLA*LSLSQILAAAAFASRDEVEKYAPNDFIRQGLRSVALVLDASEVAINSSWQTDFNWACCSTYKGRMTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSRDGLQVMADRGLNSMPPSLVREGIHYTAPPFKRRRDAQFTNNADMDSTWEVVNLRIHVERAIGAMKQWTILDTKL 800 G + V R W LY L L+ I F S++ V K P +F + ++LD SE+ I S YK T K+LVGIT G +SY+ + GR++D ++ R +++++ AG VM DRG + ++V +G+ PPF RD Q T A+ + T + ++RIHVERAIG MK + ILD L Sbjct: 70 GISTSLVSRICITWINLLY----LELNDIFP---FPSQELVRKNMPQEFAEYP--TTRIILDCSEIFIQRPSAMLAQSETWSDYKHHNTWKVLVGITPNGQVSYLSHLWGGRVSDKQITRESGVLDLLDAGD------NVMVDRGFDIS--NIVPDGVTVNMPPFLAGRD-QMTA-AETEETMTIASVRIHVERAIGRMKTYHILDGTL 259
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Match: A0A7M7TH00_STRPU (THAP-type domain-containing protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7TH00_STRPU) HSP 1 Score: 92.8 bits (229), Expect = 1.050e-17 Identity = 62/172 (36.05%), Postives = 91/172 (52.91%), Query Frame = 3 Query: 282 SRDEVEKYAPNDFIRQGLRSVALVLDASEVAINSSWQTDFNWACCSTYKGRMTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSRDGLQVMADRGLNSMPPSLVREGIHYTAPPFKRRRDA--QFTNNADMDSTWEVVNLRIHVERAIGAMKQWTILD 791 S+++ KY PN F + +V ++D +E+ I+ + S YK R T K LVGIT GG IS+V + G +D ++V+ +++ G +MADRG N + L+ + + PPF R A QFT + D+ T V N RIHVERAIG MK++ IL Sbjct: 319 SQEDTHKYYPNCF-NKFHGTVRCIIDCTEIQIDRPTLAGSHSQVYSQYKARPTLKCLVGITPGGTISFVSKPAGGNTSDKKLVKMSNIIDKFEKGDT------IMADRGFN-IQDLLLEKQVKVVIPPFMRTTKATNQFTESEDVQ-TKTVANARIHVERAIGRMKEFGILQ 481 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig93.16919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig93.16919.1 >prot_C-linearis_contig93.16919.1 ID=prot_C-linearis_contig93.16919.1|Name=mRNA_C-linearis_contig93.16919.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=128bp MTAKILVGITHGGAISYVGEAYPGRMTDVEVVRADKLVEMMRAGGLSRDGback to top mRNA from alignment at C-linearis_contig93:451878..452695+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig93.16919.1 ID=mRNA_C-linearis_contig93.16919.1|Name=mRNA_C-linearis_contig93.16919.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=818bp|location=Sequence derived from alignment at C-linearis_contig93:451878..452695+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig93:451878..452695+ >mRNA_C-linearis_contig93.16919.1 ID=mRNA_C-linearis_contig93.16919.1|Name=mRNA_C-linearis_contig93.16919.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=768bp|location=Sequence derived from alignment at C-linearis_contig93:451878..452695+ (Chordaria linearis ClinC8C monoicous)back to top |