mRNA_C-linearis_contig92.16861.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: D8LFG1_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG1_ECTSI) HSP 1 Score: 274 bits (700), Expect = 5.520e-88 Identity = 152/218 (69.72%), Postives = 167/218 (76.61%), Query Frame = 1
Query: 121 NGMRCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTK-VAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRLSSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHSEGFVHRDIKPGNIILDIEGLAHLTDFGLARRMNTECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
NG+RCFSYNALY AT+RFSAD VLGSGGYG+V+AG LRTSLLGIAGLESTTK VAIKMLDP S QGED+FQAE T+ R C S++ +TADS S LP KARV+IVID AAGLEYLHSEGFVHRDIKPGNI+LD EGLAHLTDFGLAR+M+ E TNTNPV T GFMDPEY +TE LTK SDI+SLG VLACLL G
Sbjct: 3 NGVRCFSYNALYHATSRFSADGVLGSGGYGRVHAGVLRTSLLGIAGLESTTKEVAIKMLDPESLQGEDHFQAESTAGWSTRG-----------------CQAACSTL----RTADSRSMLPWKARVKIVIDGAAGLEYLHSEGFVHRDIKPGNILLDDEGLAHLTDFGLARKMDNEGTNTNPVGTIGFMDPEYLETETLTKASDIYSLGCVLACLLMG 199
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: S8E3Z9_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E3Z9_9LAMI) HSP 1 Score: 150 bits (379), Expect = 6.940e-38 Identity = 96/228 (42.11%), Postives = 126/228 (55.26%), Query Frame = 1
Query: 130 RCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRL-SSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHS---EGFVHRDIKPGNIILDIEGLAHLTDFGLARRM---------NTECTNT-NPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
R FS+ L AT FS +G GGYG +Y G LR T+VAIKML+P SSQG F EV ++RH NIV L G C E LV + + S+ D+ ++ L KAR++I ++ + L +LHS +G VH D+KPGNI+LD + L+DFG+ R + T C T NPV TFG+MDPE+ T LT SD+FS G +L LLTG
Sbjct: 326 REFSFAELEEATLGFSPKLKIGEGGYGSIYRGNLRH-----------TQVAIKMLNPYSSQGPREFHQEVNILSKVRHPNIVTLMGACLEAWTLVYEYIPNGSLEDRLTCKNNTPPLSWKARIRIATELCSALVFLHSFRPQGIVHGDLKPGNILLDANYVCKLSDFGICRELPPDEFSQYDETRCFRTENPVGTFGYMDPEFLMTGELTSKSDVFSFGVILLRLLTG 542
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: UPI001CF9D298 (leucine-rich repeat receptor protein kinase HPCA1-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF9D298) HSP 1 Score: 142 bits (359), Expect = 5.610e-35 Identity = 90/225 (40.00%), Postives = 125/225 (55.56%), Query Frame = 1
Query: 121 NGMRCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSG--LVCPRLSSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLH---SEGFVHRDIKPGNIILDIEGLAHLTDFGLARRMNTECTN---TNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
NG+RCFS+ L TN FS +LGSGGYG+VY G L T L+ VAIK S QG + F++E+ RL H N++ L G C E+ LV + + + S +L R++I +D A GL YLH + +HRDIK NI+LD +A + DFGL++ ++ N T+ T G++DPEY T LTK SD++SLG V+A L+TG
Sbjct: 590 NGVRCFSFEELKKCTNNFSNTNILGSGGYGQVYKGRLETGLI----------VAIKRAKQGSLQGLNEFKSEIELLSRLHHRNVLSLVGFCYEQGEQMLVYEFIQNGTLKDSLSGKSGIQLSWIWRLRIALDAARGLAYLHELANPTIIHRDIKSNNILLDDHLIAKVADFGLSKTLDGSEKNQIITDVKGTPGYLDPEYFKTLQLTKKSDVYSLGVVMAELITG 804
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A2P5D473_PARAD (GPCR kinase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5D473_PARAD) HSP 1 Score: 140 bits (353), Expect = 3.550e-34 Identity = 87/225 (38.67%), Postives = 122/225 (54.22%), Query Frame = 1
Query: 136 FSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRL-SSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHSE---GFVHRDIKPGNIILDIEGLAHLTDFGLARRMN---------TECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
FS++ + +TN+F +G GGYG +Y G LR +L VAIKML S QG FQ EV +LRH N+V L G C E LV L + S+ D+ D+ S L + R++I ++ + L +LHS VH D+KP NI+LD ++ L+DFG+ R ++ T C T+P TF +MDPE+ T LT SD++S G +L LLTG
Sbjct: 525 FSFSEIEESTNKFDQSLKIGEGGYGSIYKGLLRHTL-----------VAIKMLHAHSMQGPSEFQQEVDVLSKLRHPNLVTLIGACPEAWALVYEYLPNGSLDDRLCCKDNTSPLSWQTRIRIATELCSVLIFLHSSKPHSIVHGDLKPANILLDANFVSKLSDFGICRLLSHGESSSNNTTLCCRTDPKGTFAYMDPEFLSTGELTSKSDVYSFGIILLRLLTG 738
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A834LKX6_RHOSS (Protein kinase domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LKX6_RHOSS) HSP 1 Score: 138 bits (348), Expect = 3.900e-34 Identity = 84/221 (38.01%), Postives = 119/221 (53.85%), Query Frame = 1
Query: 136 FSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRL-SSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHSEGFVHRDIKPGNIILDIEGLAHLTDFGLARRMNTECTNTN--------PVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
F + + GATN F +G GGYG VY G LR T VA+K L S QG FQ EV +LRH N+V L G C + +V L + S+ D+ D+ + L K R++I ++ + L +LHS+G VH D+KP NI+LD + L+D G+ R +N ++N P TFG++DP++ +T LT SDI+S G +L LLTG
Sbjct: 102 FPLHEIEGATNNFHLSMKIGQGGYGPVYKGFLRH-----------THVAVKTLISQSMQGRSEFQQEVHFLGKLRHPNLVTLIGSCPDACIIVYEYLPNGSLEDRLSCRDNSTPLSWKTRIRIAAELCSVLIFLHSDGLVHGDLKPDNILLDANYVCKLSDLGICRLVNRNAESSNTRGCYVTVPKGTFGYIDPDFAETGELTLKSDIYSFGVILLQLLTG 311
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A2K3NRQ8_TRIPR (Leucine-rich repeat receptor-like protein kinase at2g19210-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3NRQ8_TRIPR) HSP 1 Score: 137 bits (344), Expect = 4.700e-34 Identity = 83/222 (37.39%), Postives = 120/222 (54.05%), Query Frame = 1
Query: 130 RCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGIC--AERSGLVCPRLSSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHS---EGFVHRDIKPGNIILDIEGLAHLTDFGLARRM---NTECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
+ FSY + T+ F ++G GG+GKVY G L + TKVA+K+L P+S QG FQ+E + H N+V L G C E L+ +++ + + ++ L AR++I +D A GLEYLH+ +HRD+KP NI+LD A + DFGL+R N +T P TFG++DPEYQ T K +DI+S G +L L+TG
Sbjct: 127 QAFSYTEILNITDNFKT--IIGEGGFGKVYVGIL----------QDHTKVAVKLLSPSSMQGYKEFQSEAQLLTVVHHRNLVSLVGYCDQGEIKALIYEYMANGNLQQLLSEENQDILSWNARLKIAVDAAHGLEYLHNGCKPPIMHRDLKPSNILLDENLQAKIADFGLSRAFGNDNDSHISTCPAGTFGYIDPEYQRTGNTNKKNDIYSFGIILFVLITG 336
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A6I9SSE1_SESIN (receptor-like protein kinase FERONIA n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SSE1_SESIN) HSP 1 Score: 140 bits (352), Expect = 5.140e-34 Identity = 88/224 (39.29%), Postives = 125/224 (55.80%), Query Frame = 1
Query: 124 GMRCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPR----LSSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHSEGFVHRDIKPGNIILDIEGLAHLTDFGLARRMNT----ECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
G+RCFS + + AT+ FS + G G +GKVY G + + KVAIK L S QGE+ F EV + +LRHAN+V L G C ER ++ L + + FK + + L + R++I I A GL+YLH+ G +HRD+K NI+LD E A ++DFG A+ T NT V T G++DP+Y + LTK SD++S G VL +L+G
Sbjct: 433 GLRCFSLDEMQSATDNFSHTPI-GRGSFGKVYRGLID---------DGQRKVAIKKLTFGSHQGENEFWNEVEALSKLRHANVVSLIGYCYEREEMILVYELMPLGTLAANLFKNNITDNSLSWEQRLRICIGAARGLDYLHTNGVIHRDVKSSNILLDDEFRAKISDFGFAKLGETMQLHSYINTRIVGTNGYLDPDYMRNQRLTKKSDVYSFGVVLFEVLSG 646
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: UPI0009018248 (U-box domain-containing protein 33 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI0009018248) HSP 1 Score: 139 bits (351), Expect = 6.580e-34 Identity = 85/225 (37.78%), Postives = 122/225 (54.22%), Query Frame = 1
Query: 136 FSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRL-SSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHS---EGFVHRDIKPGNIILDIEGLAHLTDFGLARRMNTE---------CTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
FS++ + AT+ F + +G GGYG +Y G LR T VAIK+L P SSQG FQ EV +LRH N+V L G C E LV L + S+ ++ + L + R++I ++ + L +LHS G VH D+KP NI+LD+ ++ L+DFG+ R ++ C T+P TF +MDPE+ T LT SD++S G +L LLTG
Sbjct: 530 FSFSEIEEATSNFDPNLKIGEGGYGSIYRGVLRQ-----------TPVAIKILHPDSSQGPSEFQQEVNILSKLRHPNLVTLIGACPESFTLVYEYLPNGSLEERINCKGNTPPLTWQTRIRIATELCSALIFLHSCNGHGIVHGDLKPANILLDLNFVSKLSDFGICRVLSQNELSDNDTSLCWRTDPKGTFVYMDPEFLSTGELTPKSDVYSFGIILLRLLTG 743
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A0L9VGL1_PHAAN (Protein kinase domain-containing protein n=2 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9VGL1_PHAAN) HSP 1 Score: 138 bits (348), Expect = 6.630e-34 Identity = 89/225 (39.56%), Postives = 123/225 (54.67%), Query Frame = 1
Query: 130 RCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRLSSSVFDK--FKTADSWSKLPGKARVQIVIDVAAGLEYLHS---EGFVHRDIKPGNIILDIEGLAHLTDFGLARRMN-------TECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLT 768
R ++ + ATN FS +G GGYG VY EL T+VAIK+L P ++QG + FQ EV R+RH N+V L G C E LV +++ D F+ S LP + R QI ++A GL +LH E VHRD+KPGNI+LD ++ ++D GLAR + T+ T+ TF ++DPEYQ T +L SDI+SLG +L L+T
Sbjct: 262 RRYTIEEIEEATNMFSDSLKIGEGGYGPVYRSEL-----------DCTQVAIKVLKPDAAQGREQFQQEVEVLSRIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGSSRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVT 475
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A4D6LU99_VIGUN (Protein brassinosteroid insensitive 1 n=1 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6LU99_VIGUN) HSP 1 Score: 139 bits (350), Expect = 9.840e-34 Identity = 90/225 (40.00%), Postives = 123/225 (54.67%), Query Frame = 1
Query: 130 RCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRLSSSVFDK--FKTADSWSKLPGKARVQIVIDVAAGLEYLHS---EGFVHRDIKPGNIILDIEGLAHLTDFGLARRMN-------TECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLT 768
R +S + ATN FS +G GGYG VY EL T+VAIK+L P ++QG + FQ EV R+RH N+V L G C E LV +++ D F+ S LP + R QI ++A GL +LH E VHRD+KPGNI+LD ++ ++D GLAR + T+ T+ TF ++DPEYQ T +L SDI+SLG +L L+T
Sbjct: 1039 RRYSIEEIEEATNMFSDSLKIGEGGYGPVYRSEL-----------DCTQVAIKVLKPDAAQGREQFQQEVEVLSRIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGSSRPPLPWQLRFQIASEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVT 1252 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig92.16861.1 >prot_C-linearis_contig92.16861.1 ID=prot_C-linearis_contig92.16861.1|Name=mRNA_C-linearis_contig92.16861.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=254bp MPQNPVPEPAPTPEPVTPTPGYPFPTNTRAADVEVRNGMRCFSYNALYGAback to top mRNA from alignment at C-linearis_contig92:163090..164225+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig92.16861.1 ID=mRNA_C-linearis_contig92.16861.1|Name=mRNA_C-linearis_contig92.16861.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1136bp|location=Sequence derived from alignment at C-linearis_contig92:163090..164225+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig92:163090..164225+ >mRNA_C-linearis_contig92.16861.1 ID=mRNA_C-linearis_contig92.16861.1|Name=mRNA_C-linearis_contig92.16861.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1524bp|location=Sequence derived from alignment at C-linearis_contig92:163090..164225+ (Chordaria linearis ClinC8C monoicous)back to top |