mRNA_C-linearis_contig91.16805.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Match: A0A6H5K3S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S3_9PHAE) HSP 1 Score: 1060 bits (2741), Expect = 0.000e+0 Identity = 572/796 (71.86%), Postives = 633/796 (79.52%), Query Frame = 3
Query: 414 KRGRERSARAREREHRMMAGIAKVVGLLGLVSSALAATVQVDLQPCILAPSTITQDNTATPDAYLIQTFYQGYWGASQLMFQDTSSLTNSDTYGKCNVVYVGISVTAEQKAALQEYSRTFRVRIVYFNAAETANDPEVSSRLGISQDFTEPLVSAPFISLATAGAASARVVPSSLTTDPRQEFNIFTRPVFQTGLDVSANGTATPIAEYVDASGTNVPSSLSFPSVAAMAYTS-DGYEELHLFFSVAWFDLGSWAWGHFIVEWGTRGVFQGERRFYLAAMVDDLFLATGQFVYDGDTNEGEEVRATASDMSAFASFESSLNDQYGSSITTEWPFNALGVLEVVNSEYVLDIADSDIALLPKGQQVGGTGITPQLPEGWLASAVPGMTAEFNSGAWDSDDLLGWVLSNLGTFWWQSHTLSHMSRDDLGESDCAIEDGGNAQIAVLTGMFDSDNYNWRSLTSPGITGHFNKYCLASAAANLMTCAPGDNTYDGVQTDVSLISSASQFHSITTTEGTNGYSGFQIVPRYATFIYFNCVTGDCLVNENEWIRRVVCGCSNLDPSQDRGTCSECDDDIQSFGSVENLFATQAATTTRQILSGRRDKYMFHQANVV---------------------------------------QQSGLPGGSLLAYWYEEVMALLTQYISFPVTSNKFDDHCAEFTMHGDLDGSGAVITATLDNGSGDISGLSLSASGTAGFIPLTVPSSNDLSSTFDLTVGSSXXXXXXXXXXXXXXSEAVPSPASAPASSSLAPLGDVMLITDPAAPT 2681
+RGRER RM A GLLGL SSA AATV VDLQPCILAPS ITQDN TPDAY+ TFY+GYWGA Q+ TS LTNS T GKCNVVYVGI VT QK LQ+YSRTF+VRIVYFNAAETANDPEV+SRLGISQDF+EPL+SAPFI+LAT GAA ARVVPS+L T+PR EFNIFTRPV T L + NGTAT +AEYVD SG NVPSSLSFPSVAAMAY S DGYEELHLFFSVAWFD GSWAW HF +EWGT+GVFQGERRFYLA MVDDLFLATG F YDGDTNEG EVR T+SDMSAFASFESSLN QYGSSI TEWPFN LG+L VVNS +VLDIA++DIALLPKGQQV G GI PQLP GWLA+AVPGMTAEF +G+W +D LLGWVL+NL TFWWQSHTLSH++RDDLGESDC+IEDGGNAQIAVLTGMF+SDNYNWRSLTSPGITG FNK+CL SA +NLMTCAPGDNTYDGVQTDVSLISS SQFHSI TTE NG+SGFQIVPRYATF+YFNC TGDCLVNENE+IRR CGCSNL+P++D+G+CS CDD IQSFGSVE L+ T+A TTTRQIL GRRDKYMFHQA++V Q S +PGGSLLAYWY+EVM LL+Q+ISFPVTS KFDDHC EF +H DLD S A++TAT+DN SG+ISG+SLSASGTAG IPLTVPS+ + T LTVGS+ XXXXXXXXXXXXX SSLAP+G+V+ TDP + T
Sbjct: 3 ERGRERGCLKNMAMLRMAAA-----GLLGLASSAWAATVTVDLQPCILAPSKITQDNGDTPDAYVTSTFYKGYWGAKQVTLTGTSELTNSLTSGKCNVVYVGIPVTEAQKVQLQDYSRTFKVRIVYFNAAETANDPEVNSRLGISQDFSEPLISAPFIALATGGAAVARVVPSTLVTNPR-EFNIFTRPVLVTNLATTGNGTATVMAEYVDDSGANVPSSLSFPSVAAMAYASNDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQGERRFYLAGMVDDLFLATGVFEYDGDTNEGAEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILNVVNSAFVLDIANADIALLPKGQQVNGDGIDPQLPVGWLATAVPGMTAEFAAGSWSTDGLLGWVLANLDTFWWQSHTLSHLARDDLGESDCSIEDGGNAQIAVLTGMFNSDNYNWRSLTSPGITGLFNKFCLTSATSNLMTCAPGDNTYDGVQTDVSLISSVSQFHSIYTTESNNGFSGFQIVPRYATFVYFNCATGDCLVNENEFIRRKTCGCSNLNPAEDKGSCSLCDD-IQSFGSVEALYETEAKTTTRQILMGRRDKYMFHQASIVPYCPTFHPPTIRLLAGFPIFVPHTLVAXXXXXXXXXXXVQNSAVPGGSLLAYWYQEVMKLLSQFISFPVTSKKFDDHCTEFGLHEDLDSSEALLTATVDNVSGEISGISLSASGTAGVIPLTVPSTLTIP-TAGLTVGSTTXXXXXXXXXXXXXXXXXXXXXXXXXXSSLAPIGEVVTSTDPGSNT 790
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Match: D8LD68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD68_ECTSI) HSP 1 Score: 607 bits (1564), Expect = 2.000e-197 Identity = 330/504 (65.48%), Postives = 366/504 (72.62%), Query Frame = 3
Query: 903 GAASARVVPSSLTTDPRQEFNIFTRPVFQTGLDVSANGTATPIAEYVDASGTNVPSSLSFPSVAAMAYTSD-GYEELHLFFSVAWFDLGSWAWGHFIVEWGTRGVFQGERRFYLAAMVDDLFLATGQFVYDGDTNEGEEVRATASDMSAFASFESSLNDQYGSSITTEWPFNALGVLEVVNSEYVLDIADSDIALLPKGQQVGG------TGITPQLPEGWLASAVPGMTAEFNSGAWDSDDLLGWVLSNLGTFWWQSHTLSHMSRDDLGESDCAIEDGGNAQIAVLTGMFDSDNYNWRSLTSPGITGHFNKYCLASAAANLM--------------------TCAPGDNTYDGVQTDVSLISSASQFHSITTTEGTNGYSGFQIVPRYATFIYFNCVTGDCLVNENEWIRRVVCGCSNLDPSQDRGTCSECDDDIQSFGSVENLFATQAATTTRQILSGRRDKYMFHQANVVQQSGLPGGSLLAYWYEEVMALLTQYISFPVT 2333
GAA ARVVPS+LTT+PR EFNIFTRPV T L + NGTAT +AEYVD SG NVPSSLSFPSVAAMAY SD GYEELHLFFSVAWFD GSWAW HF +EWGT+GVFQGERRFYLA MVDDLFLATG F YDGDTNEG EVR T+SDMSAFASFESSLN QYGSSI TEWPFN LG+LEVV+S +VLDIA++DIALLPKGQQV G G +G + + G GA G VL + H L+ + G L DNYNWRSLTSPGITGHFNK+CL SA +NLM TCAPGDNTYDGVQTDVSLISS SQFHSI TTE NG+SGFQ VPRY TF+YFNC TG+CLVNENE+IRR CGCSNL+P++D+G+CS CDD IQSFG+VE L+ T+A TTTRQIL GRRDKYMFHQANVVQ S +PGGSLLAYWY+EVM L +Q+ISFPVT
Sbjct: 4 GAAVARVVPSTLTTNPR-EFNIFTRPVLVTNLATTGNGTATVMAEYVDDSGANVPSSLSFPSVAAMAYASDDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQGERRFYLAGMVDDLFLATGVFEYDGDTNEGAEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILEVVDSAFVLDIANADIALLPKGQQVSGDAPRRLAGYRRPRHDGRVRRRLLGRGRSARMGAGQP----GHVLVA------EPHPLAPLE--------------GRPGGVGLHHRGRRDNYNWRSLTSPGITGHFNKFCLTSATSNLMKDSCMRVYKPRGLRTLCQTLTCAPGDNTYDGVQTDVSLISSVSQFHSIYTTESNNGFSGFQNVPRYPTFVYFNCATGNCLVNENEFIRRSTCGCSNLNPAEDQGSCSLCDD-IQSFGNVEALYETEAKTTTRQILMGRRDKYMFHQANVVQNSAVPGGSLLAYWYQEVMELFSQFISFPVT 481
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Match: D7G056_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G056_ECTSI) HSP 1 Score: 610 bits (1574), Expect = 5.950e-187 Identity = 346/706 (49.01%), Postives = 459/706 (65.01%), Query Frame = 3
Query: 528 VQVDLQPCILAPSTITQDNTATPDAYLIQTFYQGYWGASQLMFQDTSSLTN-----SDTYGKCNVVYVGISVTAEQKAALQEYSRTFRVRIVYFNAAETANDPEVSSRLGISQDFTEPLVSAPFISLATAGAASARVVPSSLTTDPRQEFNIFTRPVFQTGLDVSANGTATPIAEYVDASG---TNVPSSLSFPSVAAMA--YTSDGYEELHLFFSVAWFDLGSWAWGHFIVEWGTRGVFQGERRFYLAAMVDDLFLATGQFVYDGDTNEGEEVRATASDMSAFASFESSLNDQYGSSITTEWPFNALGVLEVVNSEYVLDI-ADSDIALLPKGQQVGGTGITPQLPE-GWL------ASAVPGMTAEFNSGAWDSDDLLGWVLSNLGTFWWQSHTLSHMSRDDLGESDCAIEDGGNAQIAVLTGMFDSDNYNWRSLTSPGITGHFNKYCLASAAANLMTCAPGDNTYDGVQ-TDVSLISSASQFHSITTTEGTNGYSGFQIVPRYATFIYFNCVTGDCLVNENEWIRRVVCGCSNLDPSQDRGTCSECDDDIQSF----------GSVENLFATQAATTTRQILSGRRDKYMFHQANVVQQSGLP--------------GGSLLAYWYEEVMALLTQYI---SFPVTSNKFDDHCAEFTMHGDLDGSGAVITATLDNGSGDISGLSLSASGTAGF-IPLTVPSSN 2504
VQVD+ PCILA ++ +D AYL FY+G+W A+Q + +++ + +GKCNVVYVGI +A QK LQ+YSR F VRIVYF+AA+T D EV +RLG+ +F +P V AP + T G+A + + P+ + TDP Q N+F RPV T +D G + +A+Y D +G V + ++ P AA+ +DG EE+H+F S+AWFD GSWAWGHFI EWGTRG+FQGERRFYL +VDDLFL+TG ++YD + G E R + +D+ F + E++ N YG+S+ TE FN LGVL+ V S + AD+DI LLPKG + PQ+ + WL A GM ++++G +DSDDLL V ++L F+WQSHT++H++RD+LG++DC IEDGGN ++A++ GMFD+DNYNWRS+TSPGITG FN CL S NLM C PGDNTY G TDV LI+ +QFHS+TTT GTNGY+G QIVPR+AT +Y+NCVTG CL++ENE IRR VCGC++L+P+ +GTCS C QSF G +E LF T+ TTTR IL+GRRDKYMFHQANV+ + SLL YWY V+A + ++I SFP+ + KFD+ C F H DLD SGAV+TAT D SG I+G SL S G IPLTVP+++
Sbjct: 604 VQVDMVPCILASESVEKDVGPVASAYLFNEFYKGFWTATQNVQAPPAAVLDLVEALDADHGKCNVVYVGIVPSAAQKQQLQDYSRKFNVRIVYFDAADTILDTEVQARLGMQSNFDQPFVGAPRVKR-TGGSADS-IAPADMLTDPSQN-NLFNRPVVTT-VDTLPAGVSI-MAQYADENGDVIAGVLAGVTNPESAAIVEYIGTDGLEEMHVFVSLAWFDTGSWAWGHFISEWGTRGIFQGERRFYLGGVVDDLFLSTGVWIYDPPSFFGPEERLSGADLQKFQNSEAAFNTAYGASVKTEHAFNGLGVLDKVGSTRRSWVGADADIGLLPKGDPPNPSTGIPQISDPNWLSTQFNPADGELGMQDDYDAGLFDSDDLLARVQADLDAFFWQSHTMTHLARDNLGKNDCDIEDGGNVRMAIMFGMFDNDNYNWRSMTSPGITGLFNPNCLQSGDENLMKCYPGDNTYSGPPLTDVFLINENNQFHSLTTTVGTNGYAGMQIVPRFATNVYYNCVTGQCLIDENEKIRRDVCGCTDLNPANPQGTCSACPSGTQSFNDIASSDPSIGPLEALFQTEERTTTRYILTGRRDKYMFHQANVISTTWTTDTSDPMYVSPRPTNNPSLLEYWYIRVLAEMARFINTGSFPIQTLKFDNLCHNFYQHEDLDSSGAVLTATKDP-SGAITGFSLETSSNNGAPIPLTVPTAS 1303
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Match: A0A6H5K730_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K730_9PHAE) HSP 1 Score: 572 bits (1473), Expect = 1.500e-179 Identity = 338/711 (47.54%), Postives = 447/711 (62.87%), Query Frame = 3
Query: 528 VQVDLQPCILAPSTITQDNTATPDAYLIQTFYQGYWGASQLMFQDTSS-----LTNSD-TYGKCNVVYVGISVTAEQKAA------LQEYSRTFRVRIVYFNAAETANDPEVSSRLGISQDFTEPLVSAPFISLATAGAASARVVPSSLTTDPRQEFNIFTRPVFQTGLDVSANGTATPIAEYVDASGTNV--------PSSLSFPSVAAMAYTS----DGYEELHLFFSVAWFDLGSWAWGHFIVEWGTRGVFQGERRFYLAAMVDDLFLATGQFVYDGDTNEG-EEVRATASDMSAFASFESSLNDQYGSSITTEWPFNALGVLEVVNSEYVLDIADSDIALLPKGQQV-----GGTGITP-QLPEGWLASA-VPGMTAEFNSGAWDSDDLLGWVLSNLGTFWWQSHTLSHMSRDDLGESDCAIEDGGNAQIAVLTGMFDSDNYNWRSLTSPGITGHFNKYCLASAAANLMTCAPGDNTYDGVQTD-VSLISSASQFHSITTTEGTNGYSGFQIVPRYATFIYFNCVTGDCLVNENEWIRRVVCGCSNLDPS-------QDRGTC-----SECDDDIQSFGSVENLFATQAATTTRQILSGRRDKYMFHQANVVQQSGLPGG-SLLAYWYEEVMALLTQYIS------FPVTSNKFDDHCAEFTMHGDLDGSGAVITATLDNGSGDISGLSLS-ASGTAGFIPLTVPSS 2501
++VDL+PCI+ + I QD + +AYL+ ++G+W ASQ + DT L + D +GKC+ +++G + + A L YS F+VR+V+F+ AETAN +++++GI Q F++ L++A I L + ARVV +L TDP + IF RPV +G G T +A+ VD+ G ++ PSS A+MA + DG EE+H+FF++AWF + SWAW H+I+EW T+GVFQGERRF+L AMVDD FL T FVY+G +N EE R + ++ F S +LN+ Y + I TE+PFNALG+LE ++Y D+D ALL KG+ G G+ P + PE W + + G+TAEF+S + DDLL L F+W SHTLSH +RD+LG+ DC EDGGNAQIAV+TG+FD D Y WRS+T+PGITG +NK CL SA NL+TCAPGDNTY G T VSLIS SQFHSI TTE NG +GFQIVPR+ATF+Y+NC T DCLV EN +IRR VCGC+++DP D C S C + +Q+FG+ + LF +A TTTR ILSGRRDKYMFHQANVV S G SLL YWYE V+ + Y++ FP+ S KFDD C F H DLDGS A++T T + GDISG+ LS G AG IP+TVP+S
Sbjct: 27 IKVDLRPCIITKAAIEQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDGNHGKCSAIFIGSQPSVGEDGATAQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQYFSDTLLAAAGIRLKD---SDARVVNPALQTDPSE---IFFRPVRVSG--DPTGGERTIVADLVDSDGQSISDTDGIWDPSSTMETPGASMAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNTFVYNGGSNASDEEERISGEELRDFLSATKALNELYNAEIITEFPFNALGILEKAETKYTFTFEDADAALLAKGEPPVDNGDGTVGLAPTKTPEDWFNTVTMEGLTAEFDSWK-EKDDLLQASLDMKDDFFWHSHTLSHQARDNLGQVDCESEDGGNAQIAVITGLFDVDTYGWRSMTTPGITGFYNKNCLKSAMDNLITCAPGDNTYIGAPTTTVSLISDVSQFHSIYTTEEINGLAGFQIVPRFATFVYYNCRTSDCLVLENLFIRRTVCGCTDVDPGTIDNLNIDDIAGCDFSEDSLCPNGLQAFGTADALFDVEAETTTRWILSGRRDKYMFHQANVVPTSTPLGEMSLLEYWYEVVLKKMALYLNLQGDDPFPIKSVKFDDLCTNFKHHEDLDGSNALVTITKTS-DGDISGMELSNTGGRAGVIPVTVPTS 727
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Match: D7FLJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ1_ECTSI) HSP 1 Score: 543 bits (1399), Expect = 8.190e-168 Identity = 318/720 (44.17%), Postives = 434/720 (60.28%), Query Frame = 3
Query: 507 SSALAATVQVDLQPCILAPSTITQDNTATPDAYLIQTFYQGYWG--ASQLMFQDTSSLT-----NSDT----YGKCNVVYVGISVTAEQKAALQEYSRTFRVRIVYFNAAETANDPEVSSRLGISQDFTEPLVSAPFISLATAGAASARVVPSSLTTDPRQ------EFNIFTRPVFQTGLDVSANGTATPIAEYVDASGTNVPSSLSFP--SVAAMAYT-SDGYEELHLFFSVAWFDLGSWAWGHFIVEWGTRGVFQGERRFYLAAMVDDLFLATGQFVYDGDTNEGE-EVRATASDMSAFASFESSLNDQY-GSSITTEWPFNALGVLE-----VVNSEYVLDIADSDIALLPKGQQVGGTGITPQLPEGWLASAVPGMTAEFNSGAWDS-DDLLGWVLSNL---GTFWWQSHTLSHMSRDDLGESDCAIEDGGNAQIAVLTGMFDSDNYNWRSLTSPGITGHFNKYCLASAAANLMTCAPGDNTYDGVQTDVS-LISSASQFHSITTTEGTNGYSGFQIVPRYATFIYFNCVTGDCLVNENEWIRRVVCGCSNLDPSQDRGTCS----ECDDD-----IQSFGSVENLFATQAATTTRQILSGRRDKYMFHQANVVQQSGLPGG--SLLAYWYEEVMALLTQYISFPVTSNKFDDHCAEFTMHGDLDGSGAVITATLDNGSGDISGLSLSASGTAGFIPLTVPSSNDLS-STFDLTV 2534
+ A++ V VDL PC+ + + + N P Y++ F++GYW + + +T L+ ++DT +GKCN VY+G + + Q AAL YS ++VR+VYF +A T +++LGI F +V+ F+ L+ GA + TDP + + V + G++V +A+YVD+ S + + A ++YT +DG+EELH+F ++ WFD G+W W HF EW T+G+F GERRFYLAA+VDDLFL+T +F YDG NE R T D++ S + SLN Y GS I TE+ FN G+ E V N YV D ++ + KG Q G WLA+ VP M + G W++ D+LL V+S L TF+ HTL H+SRD L E+DC ED GN QIA++TGM+DSDNYNWRS+ SPGITG FN+ CL SAA NLM C PGDNT+DG + + L++ +QFHSI +T NGY G QIVPR+AT++YFNCVTG CLVNENE+IRR VCGC+ LDPS TC+ EC DD IQSFG +E LF +A+TTTR +L+GRRDKYMFHQAN++ + G SLL YWYE V+ + + Y++FPV S KFDD C EFT+H LD S +T LD +G ++GLS + AG +PLTVP+++ S T DL++
Sbjct: 89 TEAVSGDVLVDLVPCLFSSLAVGESNENNPALYIMSLFFKGYWSPKTEEYVVSETDDLSALLVDSTDTSGVPHGKCNAVYIGYAPSTAQVAALTAYSAQYKVRLVYFPSALTHTTESFTTKLGIQTYFAGDIVTPAFVQLSDLGAEKVTITQPGFKTDPNVVTPALFSYPVIVNTVPEEGIEV--------LAQYVDSDSEPYLSGAAGDQENAAMLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLTNLLSVQQSLNALYAGSDIITEFAFNGGGIAEHVSQAVENITYVPDYEETMVTT--KGTQWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLVAVISYLDTSSTFYHGHHTLIHLSRDQLRETDCVTEDSGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGATILVNEDNQFHSIYSTVADNGYDGIQIVPRFATYVYFNCVTGSCLVNENEYIRRFVCGCTPLDPSIADYTCTSTADECVDDDGAPDIQSFGDIEALFDAEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGTQSLLDYWYERVLEVFSSYVTFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALD-ATGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTDLSI 797
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Match: D7FLI7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI7_ECTSI) HSP 1 Score: 540 bits (1392), Expect = 4.600e-167 Identity = 311/700 (44.43%), Postives = 425/700 (60.71%), Query Frame = 3
Query: 522 ATVQVDLQPCILAPSTITQDNTATPDAYLIQTFYQGYWG--ASQLMFQDTSSLT-----NSDT----YGKCNVVYVGISVTAEQKAALQEYSRTFRVRIVYFNAAETANDPEVSSRLGISQDFTEPLVSAPFISLATAGAASARVVPSSLTTDPRQEFNIFTRPVFQTGLDVSA--NGTATPIAEYVDASGTNVPSSLSFP--SVAAMAYT-SDGYEELHLFFSVAWFDLGSWAWGHFIVEWGTRGVFQGERRFYLAAMVDDLFLATGQFVYDGDTNEGE-EVRATASDMSAFASFESSLNDQY-GSSITTEWPFNALGVLEVVNSE-----YVLDIADSDIALLPKGQQVGGTGITPQLPEGWLASAVPGMTAEFNSGAWDS-DDLLGWVLSNL---GTFWWQSHTLSHMSRDDLGESDCAIEDGGNAQIAVLTGMFDSDNYNWRSLTSPGITGHFNKYCLASAAANLMTCAPGDNTYDGVQTDVS-LISSASQFHSITTTEGTNGYSGFQIVPRYATFIYFNCVTGDCLVNENEWIRRVVCGCSNLDPSQDRGTCS----EC-----DDDIQSFGSVENLFATQAATTTRQILSGRRDKYMFHQANVVQQSGLPGG--SLLAYWYEEVMALLTQYISFPVTSNKFDDHCAEFTMHGDLDGSGAVITATLDNGSGDISGLSLSASGTAGFIPLTVPSSN 2504
A V VDL PC+ + + + N P Y++ F++GYW + + ++ LT +SDT +GKCN VYVG + + +Q AAL YS F+VR+VYF +A T E +++LG+ F + + F+ L+ G + TDP N+FT +F + ++ + +A+YVD S + + A ++YT +DG+EELH+FF++ WFD G+W W HF EW T+G+F GERRFYLAA+VDDLFL+T +F YDG+ NE R T D++ + +LN QY GS I TE+ FN G+ E V+ YV + ++ + + KG + G WLA+ VP M + G W++ DDLL VLS L +F+ HTL H+SRD L ESDC ED GN QIA++TGM+DSDNYNWRS+ SPGITG FN+ CL SAA NLM C PGDNT+DG + + L++ +QFHSI +T NGY G QIVPR+AT++YFNCVTGDCLV ENE+IRR VC C+ LDPS TC+ EC DIQSFG +E LF +A+TTTR +L+GRRDKYMFHQANV+ + G SLL YWYE V+ + + Y++FPV S KFDD C EF +H LD S +T LD +G ++G + + AG +PLTVP+++
Sbjct: 74 ADVLVDLVPCLFSSVAVGESNENNPALYIMSLFFKGYWSPKTEEHVVKEGDDLTALLVDSSDTSEVPHGKCNAVYVGYAPSTDQAAALTAYSAQFKVRLVYFPSALTHTTAEFTTKLGVQTYFAGDITTPAFVQLSDLGGEKVSITKPGFKTDP----NLFTPALFSYPVIINTVPDDGIEVLAQYVDGDSEPYLSGAAGDQENAAMLSYTGADGHEELHVFFTIGWFDAGAWPWAHFFNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGEMNEAALSQRCTGEDLTNLLRVQEALNTQYSGSDIITEFAFNGAGIAEHVSQSVDGITYVPNYEETMVTI--KGTKWYEDGQVNVHDTNWLATNVPLMQQDMADGTWEANDDLLAGVLSYLYKPSSFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYSTVAINGYDGIQIVPRFATYVYFNCVTGDCLVKENEYIRRFVCECTPLDPSIADYTCTSTAAECIGTDGATDIQSFGDIEALFDAEASTTTRYMLTGRRDKYMFHQANVIPAGDVGDGTQSLLDYWYERVLEVYSSYVTFPVKSIKFDDLCTEFKLHESLDESSPYVTMGLD-ATGAVTGFNYVSGSGAGLVPLTVPTAS 766
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Match: D7G022_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G022_ECTSI) HSP 1 Score: 556 bits (1432), Expect = 5.660e-167 Identity = 323/701 (46.08%), Postives = 428/701 (61.06%), Query Frame = 3
Query: 528 VQVDLQPCILAPSTITQDNTATPDAYLIQTFYQGYWGASQLMFQDTSSLTNSDTYGKCNVVYVGISVTAEQKAALQEYSRTFRVRIVYFNAAETANDPEVSSRLGISQDFTEPLVSAPFISLATAGAASARVVPSSLTTDPRQEFNIFTRPVFQTGLDVSANGTATPIAEYVDASGT---NVPSSLSFPSVAAMA--YTSDGYEELHLFFSVAWFDLGSWAWGHFIVEWGTRGVFQGERRFYLAAMVDDLFLATGQFVYDGDTNEGEEVRATASDMSAFASFESSLNDQYGSSITTEWPFNALGVLEVVNSEYVLDI-ADSDIALLPKGQQVGGTGITPQLPE-GWL------ASAVPGMTAEFNSGAWDSDDLLGWVLSNLGTFWWQSHTLSHMSRDDLGESDCAIEDGGNAQIAVLTGMFDSDNYNWRSLTSPGITGHFNKYCLASAAANLMTCAPGDNTYDGVQ-TDVSLISSASQFHSITTTEGTNGYSGFQIVPRYATFIYFNCVTGDCLVNENEWIRRVVCGCSNLDPSQDRGTCSECDDDIQSF----------GSVENLFATQAATTTRQILSGRRDKYMFHQANVVQQSGLPGGS--------------LLAYWYEEVMALLTQYI---SFPVTSNKFDDHCAEFTMHGDLDGSGAVITATLDNGSGDISGLSLSASGTAGF-IPLTVPSSN 2504
VQVD+ PCILA + +D AYL F++G+W A+Q VRIVYF+ A+T D EV +RLG+ +F +P V AP + G ++ + P+ + TDP Q N+F RPV T +D G + +A+Y D +G V + ++ P AA+ +DG EE+H+F S+AWFD GSWAWGHFI EWGTRG+FQGERRFYL +VDDLFL+TG ++YD + G E R + +D+ F + E++ N +YG+S+ TE FN LGVL+ V S + A +D+ LLPKG + PQ+ + WL A+ GM ++++G + SDDLL V ++L F+WQSHTL+H+SRD+LG++DC IEDGGN ++ V+ GMFD+DNYNWRS+TSPGITG FN CL S NLM C PGDNTY G T VSLI+ +QFHS+TTT GTNGY+G QIVPR+AT +Y+NCVTG CL++ENE IRR VCGC++L+P+ +GTCS C QSF G +E LF T+ TTTR IL+GRRDKYMFHQANV+ + S LL YWY V+A +++YI SFP+ + KFD+ C F H DLD SGAV+TAT D SG I+G SL S G IPLTVP+++
Sbjct: 639 VQVDMVPCILASEAVEKDAGPVASAYLFNEFFKGFWTATQ-------------------------------------------VRIVYFDIADTILDTEVQARLGMQSNFDQPFVGAPRVK--RTGGSTDSIAPADMLTDPTQN-NLFNRPVVTT-VDTLPAGVSI-LAQYADDNGDAIGGVLAGVTNPQSAAIVEYIGADGLEEMHVFISLAWFDTGSWAWGHFISEWGTRGIFQGERRFYLGGVVDDLFLSTGVWIYDPPSFFGPEERLSGADLQKFQNSEAAFNTEYGASVKTEHAFNGLGVLDKVGSTRRSWVGAAADMGLLPKGDPPNPSTGIPQISDPNWLSIQFNPAAGEQGMQDDYDAGLFSSDDLLARVQADLDAFFWQSHTLTHLSRDNLGKNDCDIEDGGNVRLGVMFGMFDNDNYNWRSMTSPGITGLFNPNCLQSGDENLMKCYPGDNTYSGAPLTAVSLINENNQFHSMTTTVGTNGYAGMQIVPRFATNVYYNCVTGQCLIDENEKIRRDVCGCADLNPANPQGTCSACPSGTQSFNDVASSDPSIGPLEALFQTEERTTTRYILTGRRDKYMFHQANVISTTWTTDTSDPMYVSPRPTNDPSLLEYWYIRVLAEMSKYINTGSFPIQTLKFDNLCHNFYQHEDLDSSGAVLTATKDP-SGAITGFSLETSSDNGAPIPLTVPTAS 1290
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Match: A0A6H5JPQ4_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ4_9PHAE) HSP 1 Score: 537 bits (1384), Expect = 1.700e-163 Identity = 306/683 (44.80%), Postives = 418/683 (61.20%), Query Frame = 3
Query: 570 ITQDNTATPDAYLIQTFYQGYWG--ASQLMFQDTSSLT-------NSDTYGKCNVVYVGISVTAEQKAALQEYSRTFRVRIVYFNAAETANDPEVSSRLGISQDFTEPLVSAPFISLATAGAASARVVPSSLTTDPRQEFNIFTRPVFQTGLDVSA---NGTATPIAEYVDASGTNVPSSLSFP--SVAAMAYT-SDGYEELHLFFSVAWFDLGSWAWGHFIVEWGTRGVFQGERRFYLAAMVDDLFLATGQFVYDGDTNEGEEV-RATASDMSAFASFESSLNDQY-GSSITTEWPFNALGVLEVVNSE-----YVLDIADSDIALLPKGQQVGGTGITPQLPEGWLASAVPGMTAEFNSGAWDS-DDLLGWVLSNL---GTFWWQSHTLSHMSRDDLGESDCAIEDGGNAQIAVLTGMFDSDNYNWRSLTSPGITGHFNKYCLASAAANLMTCAPGDNTYDGVQTDVS-LISSASQFHSITTTEGTNGYSGFQIVPRYATFIYFNCVTGDCLVNENEWIRRVVCGCSNLDPSQDRGTCS----ECDD-----DIQSFGSVENLFATQAATTTRQILSGRRDKYMFHQANVVQQSGLPGG--SLLAYWYEEVMALLTQYISFPVTSNKFDDHCAEFTMHGDLDGSGAVITATLDNGSGDISGLSLSASGTAGFIPLTVPSSN 2504
+ + N P Y++ F++GYW + + +T LT ++ +G CN VY+G + + Q AAL YS F+VR+VYF +A T E +++LGI F + + F+ L+ G+ + TDP N+F+ P+F + ++A G +A+YVD++G S + + A ++YT +DG+EELH+F ++ WFD G+W W HF EW T+G+F GERRFYLAA+VDDLFL+T +F Y+G+ NE R T D+S S + +LN QY GS I TE+ FN G+ E V+ YV + ++ + KG + G WLA+ VP M + G W++ D+LL V+S L TF+ HTL H+SRD L ESDC ED GN QIA++TGM+DSDNYNWRS+ SPGITG FN+ CL SAA NLM C PGDNT+DG + + L++ +QFHSI TT NGY G QIVPR+AT++YFNCVTGDCLV ENE+IRR VC C+ LDPS CS EC D DIQSFG +E LF +A TTTR +L+GRRDKYMFHQAN++ + G SLL YWYE V+ + + Y++FPV S KFDD C EFT+H LD S +T LD +G ++GL+ + AG +PLTVP+++
Sbjct: 291 VGESNENNPALYIMSLFFKGYWSPKTEEYVVSETDDLTALLVDSTDATPHGLCNAVYIGYAPSTSQVAALTAYSAQFKVRLVYFPSALTHTTAEFTAKLGIQTYFAGDITTPAFVQLSDLGSTKVSITQPGFQTDP----NLFSPPLFSYPVIINAVPEEGVVEVLAQYVDSAGDPYLSGFAGDQENAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYNGEMNEAAVAQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQSVDGITYVPEYEETMVTT--KGTKWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLAAVISYLDTASTFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTVADNGYDGVQIVPRFATYVYFNCVTGDCLVKENEYIRRFVCECTPLDPSIADFMCSSTADECLDSDGATDIQSFGDIEALFDAEAFTTTRYMLTGRRDKYMFHQANIIPAGDVGDGTQSLLDYWYERVLEVFSSYVTFPVKSIKFDDLCTEFTLHEALDNSSPYVTMALD-ATGAVTGLTYVSGSGAGLVPLTVPTAS 966
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI) HSP 1 Score: 515 bits (1327), Expect = 9.920e-156 Identity = 304/693 (43.87%), Postives = 413/693 (59.60%), Query Frame = 3
Query: 528 VQVDLQPCILAPSTITQDNTATPDAYLIQTFYQGYWG--ASQLMFQDTSSLT-------NSDTYGKCNVVYVGISVTAEQKAALQEYSRTFRVRIVYFNAAETANDPEVSSRLGISQDFTEPLVSAPFISLATAGAASARVVPSSLTTDPRQEFNIFTRPVFQTGLDVSANGTA--TPIAEYVDASGTNVPSSLSFP--SVAAMAYT-SDGYEELHLFFSVAWFDLGSWAWGHFIVEWGTRGVFQGERRFYLAAMVDDLFLATGQFVYDGDTNEGE-EVRATASDMSAFASFESSLNDQY-GSSITTEWPFNALGVLEVVNSE-----YVLDIADSDIALLPKGQQVGGTGITPQLPEGWLASAVPGMTAEFNSGAWDS-DDLLGWVLSNLGTFWWQSHTLSHMSRDDLGESDCAIEDGGNAQIAVLTGMFDSDNYNWRSLTSPGITGHFNKYCLASAAANLMTCAPGDNTYDGVQTDVS-LISSASQFHSITTTEGTNGYSGFQIVPRYATFIYFNCVTGDCLVNENEWIRRVVCGCSNLDPSQDRGTCS----ECDDD-----IQSFGSVENLFATQAATTTRQILSGRRDKYMFHQANVVQQSGLPGGS--LLAYWYEEVMALLTQYISFPVTSNKFDDHCAEFTMHGDLDGSGAVITATLDNGSGDISGLSLSASGTAGFIPLTVPSSN 2504
V VDL PC+L ST+ + P Y++ F++GYW + + DT LT ++ +GKCN VY+G + + Q AAL YS ++VR+VY +A T E +++LGI F +++ ++ L+ G + TDP N+FT +F + ++A A +A+YVD++G S + + A ++YT +DG+EELH+F ++ WFD G+W W HF EW T+G+F GERRFYL A+VDDLFL+T +F YDG NE R T D+S S + +LN QY GS I TE+ FN G+ E V+ YV + ++ + L KG + G WLA+ VP M + G W++ DDLL +L E+DC ED GN QIA++TGM+DSDNYNWRS+ SPGITG FN+ CL SAA NLM C PGDNT+DG + + L++ +QFHSI TT NGY G QIVPR+ATF+YFNCV+G CLVNENE+IRR VC C+ LDPS TC+ EC DD IQS GS+E LF +A+TTTR +L+GRRDKYMFHQAN++ + GS LL YWYE V+ + + YI+FPV S KFDD C EFT+H LD S +T LD +G ++GLS + AG +PLTVP+++
Sbjct: 278 VLVDLVPCLL--STVAIGESTNPGLYVMSLFFKGYWSPKTEEFVVSDTDDLTALLVDSTDATPHGKCNAVYIGYAPSTAQVAALTAYSAQYKVRLVYLPSALTHTTAEFTTKLGIQTYFAGDIMTPAYVQLSALGDEKVSITQPGFQTDP----NLFTPALFSYPVIINAVPEAGIEVLAQYVDSAGEPYLSGAAGDQENAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVSQRCTGDDLSQLLSVQQALNTQYSGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTL--KGTKWFEDGQINVHDTNWLATNVPLMQQDMADGTWEANDDLLV----------------------ELRETDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVDDDGATDIQSLGSIEALFDAEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLLDYWYERVLEVFSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDE-TGAVTGLSYVSGSGAGLVPLTVPTAS 939
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 2.050e-135 Identity = 283/704 (40.20%), Postives = 396/704 (56.25%), Query Frame = 3
Query: 528 VQVDLQPCILAPSTITQDNTATPDAYLIQTFYQGYWG--ASQLMFQDTSSLT-----NSDT--YGKCNVVYVGISVTAEQKAALQEYSRTFRVRIVYFNAAETANDPEVSSRLGISQDFTEPLVSAPFISLATAGAASARVVPSSLTTDPRQEFNIFTRPVF----------QTGLDVSANGTATPIAEYVDASGTNVPSSLSFP--SVAAMAYT-SDGYEELHLFFSVAWFDLGSWAWGHFIVEWGTRGVFQGERRFYLAAMVDDLFLATGQFVYDGDTNEGEEV-RATASDMSAFASFESSLNDQY-GSSITTEWPFNALGVLEVVNSE-----YVLDIADSDIALLPKGQQVGGTGITPQLPEGWLASAVPGMTAEFNSGAWDS-DDLLGWVLSNL---GTFWWQSHTLSHMSRDDLGESDCAIEDGGNAQIAVLTGMFDSDNYNWRSLTSPGITGHFNKYCLASAAANLMTCAPGDNTYDGVQTDVS-LISSASQFHSITTTEGTNGYSGFQIVPRYATFIYFNCVTGDCLVNENEWIRRVVCGCSNLDPSQDRGTCSECDD---------DIQSFGSVENLFATQAATTTRQILSGRRDKYMFHQANVVQQSGLPGG--SLLAYWYEEVMALLTQYISFPVTSNKFDDHCAEFTMHGDLDGSGAVITATLDNGSGDISGLSLSASGTAGFIPLTVPSSN 2504
V VDL PC+ + + + N P Y++ F++GYW + + +T LT +SDT +GKCN VYVG + + +Q AAL YS F+VR+VYF +A T E +++LGI F +V+ F+ L+ G+ + TDP N+FT +F +TG++V +A+Y D++G S + + A ++YT +DG+EELH+F ++ WFD G+W W HF EW T+G+F GERRFYLAA+VDDLFL+T +F YDGD NE R T D++ S + +LN QY GS I TE+ FN G+ E V+ YV D ++ + + KG + G WLA+ VP M + G W++ D+LL V+S L T + HTL H+SRD L E+DC +D +AA NLM C PGDNT+DG + + L++ +QFHSI +T NGY G QIVPR+AT++YFNCVTG CLVNENE+IRR VC C+ LDPS +C+ D DIQSFG +E LF +A+TTTR +L+GRRDKYMFHQAN++ + G SLL YWYE V+ + + YI+FPV + KFDD C EF +H LD S +T LD +G ++G + + AG +PLTVP+++
Sbjct: 381 VLVDLVPCLFSSVAVEKSNENNPALYIMSLFFKGYWSPRTEEYVVSETDDLTALLVDSSDTTPHGKCNAVYVGYAPSTDQVAALTAYSAQFKVRLVYFPSALTHTTAEFTTKLGIQTYFAGDIVTPAFVQLSDLGSTKVSITQPGFKTDP----NLFTPALFSYPVIMNEVPETGIEV--------LAQYADSAGEPYLSGAAGDQENAAILSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGDMNEAAVAQRCTGEDLTNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQAVDGITYVPDYEETMVTI--KGTKWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLVAVISYLDTPSTIYHGHHTLIHLSRDQLRETDCVADD--------------------------------------TAAQNLMVCYPGDNTFDGTVSGATILVNEDNQFHSIYSTVANNGYDGIQIVPRFATYVYFNCVTGSCLVNENEYIRRFVCECTPLDPSIADYSCASTADECIGTDGATDIQSFGDIEALFDAEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGTQSLLDYWYERVLEVYSSYITFPVKNIKFDDLCTEFKLHEALDDSSPYVTMALD-ATGAVTGFNYVSGSGAGLVPLTVPTAS 1031 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig91.16805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig91.16805.1 >prot_C-linearis_contig91.16805.1 ID=prot_C-linearis_contig91.16805.1|Name=mRNA_C-linearis_contig91.16805.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=787bp MMAGIAKVVGLLGLVSSALAATVQVDLQPCILAPSTITQDNTATPDAYLIback to top mRNA from alignment at C-linearis_contig91:167618..185524+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig91.16805.1 ID=mRNA_C-linearis_contig91.16805.1|Name=mRNA_C-linearis_contig91.16805.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=17907bp|location=Sequence derived from alignment at C-linearis_contig91:167618..185524+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig91:167618..185524+ >mRNA_C-linearis_contig91.16805.1 ID=mRNA_C-linearis_contig91.16805.1|Name=mRNA_C-linearis_contig91.16805.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4722bp|location=Sequence derived from alignment at C-linearis_contig91:167618..185524+ (Chordaria linearis ClinC8C monoicous)back to top |