mRNA_C-linearis_contig9.16691.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Match: A0A6H5L742_9PHAE (ENDO3c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L742_9PHAE) HSP 1 Score: 535 bits (1379), Expect = 2.140e-187 Identity = 261/333 (78.38%), Postives = 285/333 (85.59%), Query Frame = 1
Query: 280 IHSVVMVQVPKGFSLSQAACSYGYYLVPPNLWQRCKEAPERADSGTFSRPLRFGQRLANAARCTISQVPSCGSVSEAKQQEARGGNPEFNVALRVDVVSAKVLTESDQENIRAQVVRMLQTTVDLEPWLRLSPQAKKIGYGRLFRSPTVFEDMVKSITGCNMKFQGTIRMNKLLCEHFGHDQAFPTPEDLEGVQAEDLKVKAKVGYRADRILGLAKSFRDGSVDPDWLEAPERTREEVFKFVKGLYGFGDYAAGNVVMLLGFYEEVPMDSETVRHFKDYHGQTTKNVKEVAPKVKKEYQAYAPYQFLQYWYEMIEWHEKKRGLAIHMWEARDF 1278
I SVVMV+VP+GFS +QAACSYGY++VPPNLWQ C+ AP DSGTFSRPLRFGQRL N A+CTIS VP+CG+ S Q GG+ + +ALRVDVVSA+ LTESDQE+IR QVVRM QTT+DL PW RL P+AKK GYGRLFRSPTVFEDMVKSITGCNMKF GTIRMNKLLCE FG AFPTPEDLE VQ EDLK KAKVGYRA RIL LA+SFRDGSVDP WLEAPERTREEV KFVKGLYGFGDYAAGNV MLLGFYE++PMDSETVRHFKDYHG TTKNVKEVAP+VKKEY+ YAPYQFLQYWYEMI WHEKKR L +H+W A +F
Sbjct: 78 ISSVVMVKVPQGFSFTQAACSYGYFVVPPNLWQPCESAPGLRDSGTFSRPLRFGQRLVNTAKCTISLVPACGAASNPNQ--GSGGDQQA-MALRVDVVSAEALTESDQEDIRVQVVRMFQTTIDLAPWFRLHPEAKKRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILRLAESFRDGSVDPTWLEAPERTREEVLKFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTTKNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRDLEVHLWNASEF 407
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Match: A0A7S0DQ45_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DQ45_9EUKA) HSP 1 Score: 236 bits (603), Expect = 1.050e-69 Identity = 132/329 (40.12%), Postives = 189/329 (57.45%), Query Frame = 1
Query: 301 QVPKGFSLSQAACSYGYYLVPPNLWQRCKEAPERADSGTFSRPLRFGQRLANAARCTISQVPSCGSVSEAKQQEARGGNPEFNVALRVDVVSAKVLTESDQENIRAQVVRMLQTTVDLEPWLRLSPQAKKIGYGRLFRSPTVFEDMVKSITGCNMKFQGTIRMNKLLCEHFGHDQAFPTPEDLEGVQAEDLKVKAKVGYRADRILGLAKSFR--DG--SVDPDWLEAPERTREEVFKFVKGLYGFGDYAAGNVVMLLGFYEEVPMDSETVRHFKDYHGQTTK-NVKEVAPKVKKEYQAYAPYQFLQYWYEMIEWHEKKRGLAIHMWEAR 1272
++PK FSL+Q+ CSYGY+ + PN W E D G SRP R+ TI +Q +R PE L + + + L + + + V RML+ + ++ + + P+AK G+GR FRSP ++EDMVK+IT CNMK+ GT+RMN LLC H G + AFPTP+++ +A+ L+ K+GYRA+RI LA +G +D W EA +R REE F+ + LYGFG +AA NV LLG++E P DSETVRHFK++H ++K ++ +K Y +APYQFL YW+E+ +EK+RG W R
Sbjct: 125 KIPKDFSLAQSVCSYGYFALAPNRWTPAPHG-EDEDRGKLSRPFRYANE--KVVWATI------------RQSGSRSSLPESPPNLHITLHAPHELAIHEIQEVMDGVGRMLRVQMCVKGFHEVCPEAKDRGFGRTFRSPCLWEDMVKTITNCNMKWSGTVRMNHLLCTHVGKNGAFPTPKEVLKHKAQWLQENCKLGYRAERIRRLAACVEGIEGMEKLDLQWFEASDRKREEAFERIIKLYGFGKFAAHNVCQLLGYHESFPFDSETVRHFKEHHKASSKAKFTDIEKLARKHYSTFAPYQFLAYWFELWTAYEKRRGSTSTRWTVR 438
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Match: A0A5C5V0E5_9BACT (ENDO3c domain-containing protein n=1 Tax=Posidoniimonas corsicana TaxID=1938618 RepID=A0A5C5V0E5_9BACT) HSP 1 Score: 224 bits (572), Expect = 7.360e-67 Identity = 131/319 (41.07%), Postives = 181/319 (56.74%), Query Frame = 1
Query: 298 VQVPKGFSLSQAACSYGYYLVPPNLWQRCKEAPERADSGTFSRPLRFGQRLANAARCTISQVPSCGSVSEAKQQEARGGNPEFNVALRVDVVSAKVLTESDQENIRAQVVRMLQTTVDLEPWLRLSPQAKKIGYGRLFRSPTVFEDMVKSITGCNMKFQGTIRMNKLLCEHFGHDQAFPTPEDLEGVQAEDLKVKAKVGYRADRILGLAKSFRDGSVDPDWLEAPERTREEVFKFVKGLYGFGDYAAGNVVMLLGFYEEVPMDSETVRHFKDYHG-QTTKNVKEVAPKVKKEYQAYAPYQFLQYWYEMIEWHEKKRGLA 1251
++VP F L +A CSYGY+L+ PNLW D RPL G R+ V Q G P LRV + L +DQ +RA +VRML+ DL W RL+P A++ G+GR+FRSPT+FED+VK+ITGCN+ ++ T+ MN+ L G AFPTP L + LK +VGYRA RI+ LA++F G+VDPDW E+P R E+ + + L GFG YAA N++ LLG Y+ +P+D+ET RH+ G + KN K + P + + Y APYQFL YW+E+ +E++ G A
Sbjct: 7 IRVPADFELKRAVCSYGYFLLAPNLWL--------PDQQKLLRPLTLGGRI----------------VGVGVTQPGGRGAP-----LRVACDTK--LPRADQAAVRAALVRMLRPDEDLAAWNRLNPAARRRGFGRMFRSPTLFEDLVKTITGCNVTWRNTMSMNRHLTAKVGRG-AFPTPAQLARLTPSRLKQSCRVGYRAARIINLARAFERGAVDPDWFESPARETAELREALLRLEGFGPYAAANMLQLLGHYDHLPIDTETYRHYCHVTGVERPKNDKLLDPLIHERYDPLAPYQFLAYWFEIWRDYERRYGDA 293
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Match: A0A0G4H2A2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2A2_VITBC) HSP 1 Score: 224 bits (571), Expect = 6.610e-66 Identity = 119/327 (36.39%), Postives = 189/327 (57.80%), Query Frame = 1
Query: 292 VMVQVPKGFSLSQAACSYGYYLVPPNLWQRCKEAPERA-DSGTFSRPLRFGQRLANAARCTISQVPSCGSVSEAKQQEARGGNPEFNVALRVDVVSAKVLTESDQENIRAQVVRMLQTTVDLEPWLRLSPQAKKIGYGRLFRSPTVFEDMVKSITGCNMKFQGTIRMNKLLCEHFG-HDQAFPTPEDLEGVQAEDLKVKAKVGYRADRILGLAKSFRDGSVDPDWLEAPERTREEVFKFVKGLYGFGDYAAGNVVMLLGFYEEVPMDSETVRHFKDYHGQTTKNVKEVAPKVKKEYQAYAPYQFLQYWYEMIEWHEKKRGLAIHMWE 1266
V + V F L+++ CSYG++++ PN W C P + D G F RPLR+G++ + C ++ G++ V V ++ L + I+ Q+ RM + + ++ W L +AK +G+GRLFRSPT++EDMVK+IT CN+ ++ T MN+LLC+ H +FP+P D+ E L+ + +GYRA R+ LA +F DG++D W E +RT++EV+ L GFG +A NV+ L+GF E P DSETVRHF++ H + ++ ++ K K+ Y YAPYQF+ YW+E+ + +++K G+ WE
Sbjct: 38 VTIDVADDFDLAKSICSYGFFVLAPNKW--CPPPPSLSTDHGVFKRPLRYGEKGQHV--CDVTLTMGQGTID-------------------VSVATSCPLDDGHLGEIKQQICRMCRVSFPIDSWWSLHSEAKSLGFGRLFRSPTLWEDMVKTITVCNVHWKRTCIMNRLLCDKVSSHMGSFPSPSDVLKFSPEWLQRECNLGYRATRLYKLASAFTDGTIDVAWWEHSDRTQQEVWDACLSLNGFGPFATNNVLQLMGFLETFPYDSETVRHFRECH-KVIGSLADITKKAKQHYAKYAPYQFVAYWFELWKGYQQKDGVDADRWE 340
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Match: A0A5C5YQQ2_9BACT (HhH-GPD superfamily base excision DNA repair protein n=1 Tax=Posidoniimonas polymericola TaxID=2528002 RepID=A0A5C5YQQ2_9BACT) HSP 1 Score: 221 bits (564), Expect = 1.150e-65 Identity = 129/319 (40.44%), Postives = 179/319 (56.11%), Query Frame = 1
Query: 298 VQVPKGFSLSQAACSYGYYLVPPNLWQRCKEAPERADSGTFSRPLRFGQRLANAARCTISQVPSCGSVSEAKQQEARGGNPEFNVALRVDVVSAKVLTESDQENIRAQVVRMLQTTVDLEPWLRLSPQAKKIGYGRLFRSPTVFEDMVKSITGCNMKFQGTIRMNKLLCEHFGHDQAFPTPEDLEGVQAEDLKVKAKVGYRADRILGLAKSFRDGSVDPDWLEAPERTREEVFKFVKGLYGFGDYAAGNVVMLLGFYEEVPMDSETVRHFKDYHG-QTTKNVKEVAPKVKKEYQAYAPYQFLQYWYEMIEWHEKKRGLA 1251
++VP F L +A CSYGY+L+ PN W+ + T RPL G A T++Q G P + + D + L + Q+ +RA V RML+ DL W RL P A++ G+GR+FRSPT+FED+VK+ITGCN+ ++ TI MN+ L E G AFPTP L + LK +VGYRA RI+ LA++F G VDPDW E PER E+ + + L G G YAA N++ LLG Y+ +P+D+ET RH+ G + KN K + P + Y APYQFL YW+E+ +E++ G A
Sbjct: 7 LRVPADFELKRAVCSYGYFLLAPNDWRPADQ--------TLYRPLTLG---AETVGVTLTQP----------------GGPGAPLRVACDAL----LDRTAQQRVRAAVTRMLRIDEDLTDWRRLCPAARRRGFGRMFRSPTLFEDLVKTITGCNVTWRNTISMNRHLVEKVGQG-AFPTPAQLARLTPSRLKASCRVGYRAGRIINLARAFERGDVDPDWFEHPERGTLELRERLLELKGIGPYAAANMLQLLGRYDHLPIDTETYRHYCHVTGAERPKNDKLLDPLIHARYDPLAPYQFLAYWFEIWRDYERRYGDA 293
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Match: A0A5C5ZIG4_9BACT (ENDO3c domain-containing protein n=2 Tax=Pseudobythopirellula maris TaxID=2527991 RepID=A0A5C5ZIG4_9BACT) HSP 1 Score: 220 bits (560), Expect = 4.530e-65 Identity = 133/329 (40.43%), Postives = 187/329 (56.84%), Query Frame = 1
Query: 298 VQVPKGFSLSQAACSYGYYLVPPNLWQRCKEAPERADSGTFSRPLRFG---QRLANAARCTISQVPSCGSVSEAKQQEARGGNPEFNVALRVDVVSAKVLTESDQENIRAQVVRMLQTTVDLEPWLRLSPQAKKIGYGRLFRSPTVFEDMVKSITGCNMKFQGTIRMNKLLCEHFGHDQAFPTPEDLEGVQAEDLKVKAKVGYRADRILGLAKSFRDGSVDPDWLEAPERTREEVFKFVKGLYGFGDYAAGNVVMLLGFYEEVPMDSETVRHFKDYHGQTTK-NVKEVAPKVKKEYQAYAPYQFLQYWYEMIEWHEKKRGLAIHMWEAR 1272
+ VPK F +A CSYGY+L+ PNLW+ PE P G +RL+ +E Q RG V +R D + L +++ +R + RML+ DL W RL+P AK+ G+GRLFRSPT+FEDMVK+IT CN+ + TIRMN+LL E G + AFPT E L L+ + +VGYRA RI+GLA+ F G VDP W E+P+R+ +E+ + + L GFG YAA NV+ LG Y+ +P+D+ET RH+ G++ N KE+ P ++ Y + PY FL YW+E+ +E++ G A WE R
Sbjct: 3 IAVPKDFDFVRAVCSYGYFLLAPNLWR-----PETLSLLRVFDPAEGGLEGERLS----------------TEIDQPGGRGAP----VRVRCD----RPLAAAERAFVRRALARMLRVEDDLARWRRLNPAAKRRGFGRLFRSPTLFEDMVKTITSCNVGWTSTIRMNELLVELVG-EGAFPTAERLARWTPARLQKRCRVGYRAKRIIGLARRFDRGEVDPVWFESPQRSTDELREAILALDGFGPYAAANVLQTLGHYDHLPIDTETYRHYCHMTGRSRPANDKELDPLIEARYARFGPYPFLAYWFELWRDYERRHGDAW-TWEPR 300
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Match: A0A518D820_9BACT (ENDO3c domain-containing protein n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518D820_9BACT) HSP 1 Score: 213 bits (542), Expect = 2.360e-62 Identity = 117/316 (37.03%), Postives = 185/316 (58.54%), Query Frame = 1
Query: 307 PKGFSLSQAACSYGYYLVPPNLWQRCKEAPERADSGTFSRPLRFGQRLANAARCTISQVPSCGSVSEAKQQEARGGNPEFNVALRVDVVSAKVLTESDQENIRAQVVRMLQTTVDLEPWLRLSPQAKKIGYGRLFRSPTVFEDMVKSITGCNMKFQGTIRMNKLLCEHFGHDQAFPTPEDLEGVQAEDLKVKAKVGYRADRILGLAKSFRDGSVDPDWLEAPERTREEVFKFVKGLYGFGDYAAGNVVMLLGFYEEVPMDSETVRHFKDYHG-QTTKNVKEVAPKVKKEYQAYAPYQFLQYWYEMIEWHEKKRGLA 1251
P+GF+ ++A CSYGY+L+ PN W+ ++A E + + P T+ +V Q + G A R+D A +++ + RML+ DL W RL P+A++ G+GRLFRS ++FEDMVK+ITGCN+ ++ TI MN+LL E FG AFP+P L V E LK +AKVGYRA+RI+ LA+ F +GS++P W E+P+ + ++ + + ++GFG YAA N++ LLG ++ VP+D+ET RH+ G + + + +++ Y Y PYQFL YW+++ ++++ G A
Sbjct: 10 PEGFAFNRAVCSYGYFLLAPNRWRPAEQALEHTAAPEGAGP-------------TLLRVT---------QPKGAGAPLRIECATRLDRAQAG--------HVKQALRRMLRLDDDLSAWRRLHPKARRRGFGRLFRSASLFEDMVKTITGCNVTWRNTIVMNRLLAERFGAG-AFPSPAQLARVAPERLKAEAKVGYRAERIIQLAQRFEEGSIEPGWFESPQHSTGQLREALLAIHGFGPYAAANMLQLLGRFDHVPIDTETYRHYCLQQGVERPADAAALDAQIRAHYDRYHPYQFLAYWFDLWRDYQRRFGNA 294
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Match: A0A5C5VXT1_9BACT (HhH-GPD superfamily base excision DNA repair protein n=1 Tax=Botrimarina hoheduenensis TaxID=2528000 RepID=A0A5C5VXT1_9BACT) HSP 1 Score: 211 bits (536), Expect = 2.760e-61 Identity = 125/332 (37.65%), Postives = 187/332 (56.33%), Query Frame = 1
Query: 277 TIHSVVMVQVPKGFSLSQAACSYGYYLVPPNLWQRCKEAPERADSGTFSRPLRFGQRLANAARCTISQVPSCGSVSEAKQQEARGGNPEFNVALRVDVVSAKVLTESDQENIRAQVVRMLQTTVDLEPWLRLSPQAKKIGYGRLFRSPTVFEDMVKSITGCNMKFQGTIRMNKLLCEHFGHDQAFPTPEDLEGVQAEDLKVKAKVGYRADRILGLAKSFRDGSVDPDWLEAPERTREEVFKFVKGLYGFGDYAAGNVVMLLGFYEEVPMDSETVRHF-KDYHGQTTKNVKEVAPKVKKEYQAYAPYQFLQYWYEMIEWHEKKRGLAIHMWEA 1269
T S + + VP GF L + CSYGY+L+ PN W+ A ER SG G+ + + A + GSV Q GG V R+ + + L ++ ++ + RML+ DL W RLSP A++ +GRLFRSPT+FEDMVK+IT CN+ + T++MN+LL E G FP+ + L + E L+ +VGYRA RI+ LA+ F G +DP W EAP+RT EE+ V+ + GFG Y+ NV+ LLG Y+ +P+D+ETVR F K + +++ P ++ Y+ Y ++FL YW+++ +E +G A W+A
Sbjct: 2 TTGSSLWIAVPPGFELGETVCSYGYFLLAPNYWRPEIHALERRMSGG-----EIGRTMPSPA--------ATGSVGLVVTQP--GG-----VGARLVIRCDRPLIGPERAGVKGSLSRMLRIDQDLSAWHRLSPAARRRRFGRLFRSPTLFEDMVKTITSCNVAWPSTVKMNRLLVERVGRG-VFPSAKCLASLTPERLRELCRVGYRAKRIVSLARMFTSGELDPAWFEAPQRTTEELAAEVRRIDGFGPYSTANVLQLLGHYDRLPIDTETVRLFCKTTGSRRPARDQDLYPAIEAHYERYGLWRFLAYWFDVWRDYESLQGRAT-TWDA 311
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Match: A0A7G9P0B8_9BACT (ENDO3c domain-containing protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9P0B8_9BACT) HSP 1 Score: 208 bits (530), Expect = 6.880e-61 Identity = 114/311 (36.66%), Postives = 174/311 (55.95%), Query Frame = 1
Query: 286 SVVMVQVPKGFSLSQAACSYGYYLVPPNLWQRCKEAPERADSGTFSRPLRFGQRLANAARCTISQVPSCGSVSEAKQQEARGGNPEFNVALRVDVVSAKVLTESDQENIRAQVVRMLQTTVDLEPWLRLSPQAKKIGYGRLFRSPTVFEDMVKSITGCNMKFQGTIRMNKLLCEHFGHDQAFPTPEDLEGVQAEDLKVKAKVGYRADRILGLAKSFRDGSVDPDWLEAPERTREEVFKFVKGLYGFGDYAAGNVVMLLGFYEEVPMDSETVRHFKDYHGQTTKNVKEVAPKVKKEYQAYAPYQFLQYWYEM 1218
SV+ ++VP F+L A +YGYY + PN+W ++G RPL G + + + RG + +R D L +D+ ++ QV RML+ +L W RL A K+ +GRLFRSPT+FED++K+IT CN+ + GTI MN+ + EHFG + FPT L V+ L+ + +VGYRADR++ LA+ +G +D W E+P+RT +E+F ++ ++G G YAA N++ LG Y+ +P+DSE +RH KD G + E+ + Y +APYQFL YW+E+
Sbjct: 3 SVLSLKVPSDFALRPAVNTYGYYRLAPNVWDD--------EAGVLIRPLHDAD----------------GGIVVTRTTQTRGSG---KLTIRCD----HTLNAADRAAVKRQVTRMLRLDENLSAWRRLHRPAAKVHFGRLFRSPTLFEDIIKTITSCNISWGGTIAMNQRMVEHFG-EGGFPTARQLAAVKPAVLQKRCRVGYRADRMVKLARDVVEGRLDMAWFESPDRTTDELFDALRRIHGVGPYAASNILQHLGHYDRLPVDSELIRHLKDSRG-LEGTLAEITRRAHVLYDPFAPYQFLAYWFEL 280
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Match: A0A7S1SIE1_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SIE1_9CHLO) HSP 1 Score: 212 bits (540), Expect = 7.290e-61 Identity = 130/330 (39.39%), Postives = 176/330 (53.33%), Query Frame = 1
Query: 304 VPKGFSLSQAACSYGYYLVPPNLWQRCKEAPERADS--GTFSRPLRFGQRLANAARCTISQVPSCGSVSEAKQQEARGGNPEFNVALRVDVVSAKVLTESDQENIRAQVVRMLQTTVDLEPWLRLSPQAKKIGYGRLFRSPTVFEDMVKSITGCNMKFQGTIRMNKLLCEHFGHDQ-AFPTPEDLEGVQAEDLKVKAKVGYRADRILGLAKSFRDGSVDPDWLEAPERTREEVFKFVKGLYGFGDYAAGNVVMLLGFYEEV--PMDSETVRHFKDYHGQTTKNVKEVAPKVKKEYQAYAPYQFLQYWYEMIEWHEKKRGLAIHMWEARDF 1278
+P FSL+Q+ CSYGY+ + PN+W AP AD G F RPL + + S V Q+ + GN AL + S L ++ I+A VVRML+T ++LE W P+A G+GR +RSP+VFEDMVK+IT CN+ F+ T MN LC FG D AFP P DL + EDLK + +VGYRA I+ LA++F G + DW EV++ ++ L GFG YA NV+ LLG Y+ D+ETVR K+ G +E ++ Y YAPYQFL YW E+ + +E + G A W F
Sbjct: 92 IPADFSLAQSFCSYGYFFLAPNVWI---PAPLEADEDFGVFYRPLSC-PTVPHPRIHAPSADDRTRRVVHVIVQQDKAGN-----ALIIHTRSETDLLTCHKDFIQAAVVRMLRTDLNLEAWYACHPEAAARGFGRTYRSPSVFEDMVKTITNCNVTFKNTTTMNAALCREFGADGVAFPEPSDLAAISPEDLKARGRVGYRAASIIALAQAFVAGELSEDWFHDATVPTAEVYQKIRSLKGFGPYATSNVLQLLGRYDSAIEAWDTETVRLMKEV-GVRGSKPEEFYAAARQRYAKYAPYQFLAYWMELWQNYETRTGTASTRWRRATF 411 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16691.1 >prot_C-linearis_contig9.16691.1 ID=prot_C-linearis_contig9.16691.1|Name=mRNA_C-linearis_contig9.16691.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=425bp MVFPKPAANHKSTTLLRRTRVRGREMSTRASGRRAVSSESTGGTLSEAAPback to top mRNA from alignment at C-linearis_contig9:3015635..3022964- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig9.16691.1 ID=mRNA_C-linearis_contig9.16691.1|Name=mRNA_C-linearis_contig9.16691.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7330bp|location=Sequence derived from alignment at C-linearis_contig9:3015635..3022964- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig9:3015635..3022964- >mRNA_C-linearis_contig9.16691.1 ID=mRNA_C-linearis_contig9.16691.1|Name=mRNA_C-linearis_contig9.16691.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2550bp|location=Sequence derived from alignment at C-linearis_contig9:3015635..3022964- (Chordaria linearis ClinC8C monoicous)back to top |