mRNA_C-linearis_contig9.16649.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI) HSP 1 Score: 577 bits (1488), Expect = 5.720e-191 Identity = 304/498 (61.04%), Postives = 343/498 (68.88%), Query Frame = 2
Query: 992 VKRTGAFPYNGGWAHPPLASLHTGVGVPPLELYYVKKVFVWVPEYIWEHIDHIPCPHCGGRAQPDGWNTEPRRVFLEDDVCYLIGFRYECKKCTDDNKQRSEDERTTQTFNAWDPGVLARMDDFVSKEFPFVLTKKAAISKSMVDRLADDLLEGKGFGAVAKSLAKAYQGRYFSQVRSYVSLAKRGLSKFRGLVGQHADPGVVPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEYLQLRAQLVDGRLLAGDASFKYAKVIRLATGADGSRARPVYGIFTIMNEYDQVVFSKAMSTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYPPS----RRLRAAGEEEEDSSVGFRL-----RVGAILGGSHT*PCL----------------------------------NRSAFAS*WHGLLLSSSTRREENECVHLPDGP----------------------QNLLQNPDIVKVGVSVNSDATYL 2290
++ T FPYNGGWAHP L SLH G G+PPL +Y+KKVFVWVPEY+W+ I++IPCPHC RAQPDGWNTEPRRVFLEDDVCYLIG+RY CK CT+ NK R EDERTTQTFNAWD GVLA MDD+VSKEFPFVLTKKAAISKS+VDRLADDLLEG GF A +KSLA Y RYF+Q+RSYVSLA R +S+ +G+ + D G++PKFSSIGDPSG++SSPPSAHYLGDIW+ FYETPVVQ GCSWTREEYLQ RAQLVDG LAGDASFKYAKVIRL+ GADG+RARPV+GIFTIMNEYDQVVFSKAM+TASVHDLKNDLKMMFVKRFLGHGFKLPVIFY R+L +E + G RL G G P L N W L ++ + LPDG QNLL+NP I KVGV++NSDATYL
Sbjct: 1 MRITPEFPYNGGWAHPRLPSLHRGAGLPPLGPFYLKKVFVWVPEYLWDEIEYIPCPHCNKRAQPDGWNTEPRRVFLEDDVCYLIGYRYLCKGCTEANKGRPEDERTTQTFNAWDAGVLATMDDYVSKEFPFVLTKKAAISKSVVDRLADDLLEGTGFAAASKSLANTYHARYFNQLRSYVSLANRCVSRHKGMW-PNVDLGMIPKFSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQVVFSKAMTTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYSDECCDDRQLLLTMFKEIELETGARLYDTAEEAGGGSPGVEVLPALEFPPGKRGECVFDFRPNSIAPSVVALIDGCQLQGNVLGLDCEWEPSLGGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYL 497
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Match: A0A6H5K4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D4_9PHAE) HSP 1 Score: 503 bits (1295), Expect = 4.480e-164 Identity = 255/369 (69.11%), Postives = 289/369 (78.32%), Query Frame = 2
Query: 917 VHPQSAFFEKVKNTVNACRKHENGKVKRTGAFPYNGGWAHPPLASLHTGVGVPPLELYYVKKVFVWVPEYIWEHIDHIPCPHCGGRAQPDG--WNTEPRRVFLEDDVCYLIGFRYECKKCTDDNKQ-RSEDERTTQTFNAWDPGVLARMDDFVSKEFPFVLTKKAAISKSMVDRLADDLLEGKGFGAVAKSLAKAYQGRYFSQVRSYVSLAKRGLSKFRGLVGQHADPGVVPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEYLQLRAQLVDGRLLAGDASFKYAKVIRLATGADGSRARPVYGIFTIMNEYDQVVFSKAMSTASVHDLKNDLKMMFVKRFLGHGFKLPVIFY 2014
V PQSAF E++K+ + ACRKHENG VKR GAFPYNGGWA+PPL SL+TG+G PPLE +Y+KKV VWVPEYIWE + HIPCPHCG RAQPDG WNTEPRRVFLEDDVCY+IGFRYECK+CT NK+ RSEDERTTQTFNAWDP VLARMDDFVS++FPFVLTKKAAI+++ V+KSLA+AY RYFSQ+RSYVSLAK+G+SK+RGL GQ ++P V PKF+ GDPSGYNSS PSAH+L DIWN WFYETPVVQ + L + KYAKVIRLATG DG+RA PVYGIFTIMNEYDQVVFSKAMSTASV+DLKND KM+FVK +GHGF LPVIFY
Sbjct: 124 VPPQSAFIEQMKDNLRACRKHENGAVKRKGAFPYNGGWANPPLPSLYTGLGAPPLEPFYLKKVLVWVPEYIWEDV-HIPCPHCGARAQPDGDGWNTEPRRVFLEDDVCYMIGFRYECKECTRANKEDRSEDERTTQTFNAWDPAVLARMDDFVSEQFPFVLTKKAAINRTN--------------HTVSKSLAQAYNSRYFSQMRSYVSLAKKGISKYRGLYGQQSNPDV-PKFAGTGDPSGYNSSSPSAHHLADIWNKWFYETPVVQ----------LVMLPS--------------KYAKVIRLATGEDGTRALPVYGIFTIMNEYDQVVFSKAMSTASVYDLKNDPKMLFVKCVVGHGFTLPVIFY 452
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE) HSP 1 Score: 367 bits (941), Expect = 3.200e-116 Identity = 170/266 (63.91%), Postives = 200/266 (75.19%), Query Frame = 2
Query: 914 VVHPQSAFFEKVKNTVNACRKHENGKVKRTGAFPYNGGWAHPPLASLHTGVGVPPLELYYVKKVFVWVPEYIWEHIDHIPCPHCGGRAQPDGWNTEPRRVFLEDDVCYLIGFRYECKKCTDDNKQRSEDERTTQTFNAWDPGVLARMDDFVSKEFPFVLTKKAAISKSMVDRLADDLLEGKGFGAVAKSLAKAYQGRYFSQVRSYVSLAKRGLSKFRGL--VGQHADPGVVPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPV 1705
++ PQ+ ++K + A RKHENGKVKR FPY GWA PPL SL G+P +E +Y+KKVFVWVPEYIW ID IPCPHCG R QPDGWNT+ RRVFLE DVCYLIG+RY CK+CTD N ++ ++RTT TF AWDP VLARMDDFVSKEFPFVLT+KAAIS+S++DRLADDLLEGKGF A +KSL AY YF RSYVSLA R +S+ +GL +G AD G +PKF + D G+NS PSAHYLGDIW+ WF E PV
Sbjct: 1 MLSPQNRSIYEIKGNIKASRKHENGKVKRISEFPYRDGWASPPLPSLQQSAGIPSVEPFYLKKVFVWVPEYIWNEIDCIPCPHCGERGQPDGWNTDARRVFLEQDVCYLIGYRYYCKRCTDANAMKNSEDRTTATFKAWDPDVLARMDDFVSKEFPFVLTRKAAISRSLIDRLADDLLEGKGFAATSKSLQNAYTATYFKLYRSYVSLANRRVSQLKGLGLLGPDADVGKIPKFEEMADALGFNSRHPSAHYLGDIWHKWFDEMPV 266
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Match: A0A6H5L7G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G9_9PHAE) HSP 1 Score: 306 bits (785), Expect = 1.830e-93 Identity = 153/364 (42.03%), Postives = 225/364 (61.81%), Query Frame = 2
Query: 926 QSAFFEKVKNTVNACRKHENGKVKRTGAFPYNGGWAHPPLASLHTGVGVPPLELYYVKKVFVWVPEYIWEHIDHIPCPHCGGRAQPDGWNTE-PRRVFLEDDVCYLIGFRYECKKCTDDNKQRSEDERTTQTFNAWDPGVLARMDDFVSKEFPFVLTKKAAISKSMVDRLADDLLEGKGFGAVAKSLAKAYQGRYFSQVRSYVSLAKRGLSKFRGLVGQHADPGVVP-KFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEYLQLRAQLVDGRLLAGDASFKYAKVIRLATGADGSRARPVYGIFTIMNEYDQVVFSKAMSTASVHDLKNDLKMMFVKRFLGHGFKLPVIF 2011
Q FFE+VK+ ++ HE G VK G FP++ P A+ +P L+ +Y K V VW+PE+++ + +PCP CGG+ PDGWN + PRRVF++ DV Y++GFRY+C KC + NK + E E+ +FNAWD G L R+ +++SKEFPF+LTK++ I MVDRLADDL+ GKGF A AK++ +A+ ++ Y SL + + + A+ P +F S D + Y + PS HYL D+ +F + PV++ WT EEY Q DG +L GD+SFK+AK+IRL A R RPVYG FT+ NE QVV+ + M+T ++ +L +LK+ F+ RF+ +GFK+P ++
Sbjct: 45 QERFFEEVKDKIDQSITHEGGGVK--GRFPFDNPLVRPKCATFQPSPDLPKLDRFYQKAVLVWIPEFLFPELQAVPCPGCGGKGAPDGWNPQGPRRVFMDHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVNT--RRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEYHHRLMQRWDGDILGGDSSFKFAKIIRLRAKAGEERTRPVYGSFTVFNECKQVVWQRPMNTGALSELAEELKLFFM-RFVRNGFKVPTLW 403
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Match: A0A6H5JPP4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP4_9PHAE) HSP 1 Score: 283 bits (723), Expect = 4.580e-84 Identity = 139/323 (43.03%), Postives = 196/323 (60.68%), Query Frame = 2
Query: 926 QSAFFEKVKNTVNACRKHENGKVKRTGAFPYNGGWAHPPLASLHTGVGVPPLELYYVKKVFVWVPEYIWEHIDHIPCPHCGGRAQPDGWNTE-PRRVFLEDDVCYLIGFRYECKKCTDDNKQRSEDERTTQTFNAWDPGVLARMDDFVSKEFPFVLTKKAAISKSMVDRLADDLLEGKGFGAVAKSLAKAYQGRYFSQVRSYVSLAKRGLSKFRGLVGQHADPGVVP-KFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEYLQLRAQLVDGRLLAGDASFKYAKVIRLATGADGSRARPVYGIFTIMNE 1888
Q FFE+VK+ ++ HE G VK G FP++ P A+ +P L+ +Y K V VW+PE+++ + +PCP CGG+ PDGWN + PRRVF+E DV Y++GFRY+C KC + NK + E E+ +FNAW G L R+ +++SKEFPF+LTK++ I MVDRLADDL+ GKGF A AK++ +A+ ++ Y SL + + + A+ +P +F S D + Y + PS HYL D+W +F + PV++ WT EEY Q DG +L GDA FK+AK+IRL A R RPVYG FT+ NE
Sbjct: 45 QERFFEEVKDKIDRSITHEGGGVK--GRFPFDNPLVRPKCATFQPSPDLPKLDRFYQKAVLVWIPEFLFPELQAVPCPGCGGKGAPDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWGAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVST--RRTSSGIFRSANLAKIPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEMDSVDWTLEEYQHRLMQRWDGDILGGDALFKFAKIIRLGAKAGEERTRPVYGFFTVFNE 363
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE) HSP 1 Score: 291 bits (745), Expect = 5.310e-81 Identity = 153/386 (39.64%), Postives = 219/386 (56.74%), Query Frame = 2
Query: 926 QSAFFEKVKNTVNACRKHENGKVKRTGAFPYNGGWAHPPLASLHTGVGVPPLELYYVKKVFVWVPEYIWEHIDHIPCPHCGGRAQPDGWNTE-PRRVFLEDDVCYLIGFRYECKKCTDDNKQRSEDERTTQTFNAWDPGVLARMDDFVSKEFPFVLTKKAAISKSMVDRLADDLLEGKGFGAVAKSLAKA--------------------------YQGRYFSQVRSYVSLAK-RGLSKFRGLVGQHADPGVVPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEYLQLRAQLVDGRLLAGDASFKYAKVIRLATGADGSRARPVYGIFTIMNEYDQVVFSKAMSTASVHDLKNDLKMMFVKRFLGHGFKL 1999
Q FF+ VK ++ HE G VK G FP++ P A+ G+P ++ +Y K V VW+PE+++ + +PCP CGG+ PDGWN + PRRVF+E DV Y++GFRY+C KC N+ + E E+ +FNAWD G L R+ +++SKEFP +LTK++ I MVDRLADDL+ GKGF A AK++ + ++ Y SL R S HA +F S D + Y + PS HYL D+W ++ + PV++ G WT EEY Q DG +L+GDASFK+AK+IRL A R++PVYG+FT+ NEY+QVV+ + M T ++ +L +LK F RF+ +GFK+
Sbjct: 45 QERFFQDVKVKIDQSITHEGGGVK--GRFPFDNPLVRPKCATFQPSPGLPEVDWFYQKAVLVWIPEFLFPELQAVPCPGCGGKGAPDGWNPKGPRRVFMEHDVAYIMGFRYKCAKCAKFNQGKEEAEKRKTSFNAWDAGCLQRLPEYISKEFPSLLTKRSGIEIRMVDRLADDLVHGKGFSAAAKNICQVNVHFLICSVLKITXXXXXXXXXXXXXXTTKFMVDQLKYTSLVNSRRTSSGIFRSANHAK--TPERFGSFDDSTKYGGAVPSEHYLRDVWWLYYSKLPVLEVDGVGWTLEEYQHRLMQRWDGEVLSGDASFKFAKIIRLGARAGEERSKPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELKPFF-NRFVRNGFKV 425
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.950e-67 Identity = 134/363 (36.91%), Postives = 187/363 (51.52%), Query Frame = 2
Query: 926 QSAFFEKVKNTVNACRKHENGKVKRTGAFPYNGGWAHPPLASLHTGVGVPPLELYYVKKVFVWVPEYIWEHIDHIPCPHCGGRAQPDGWNTE-PRRVFLEDDVCYLIGFRYECKKCTDDNKQRSEDERTTQTFNAWDPGVLARMDDFVSKEFPFVLTKKAAISKSMVDRLADDLLEGKGFGAVAKSLAKAYQGRYFSQVRSYVSLAKRGLSKFRGLVGQHADPGVVPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEYLQLRAQLVDGRLLAGDASFKYAKVIRLATGADGSRARPVYGIFTIMNEYDQVVFSKAMSTASVHDLKNDLKMMFVKRFLGHGFKLPVIF 2011
Q FF++VK+ ++ E G VK G FP++ P A+ P P CGG+ PDGWN + PRRVF E DV Y++ FRY+C KC + NK + E E+ +FNAWD G L R+ +++SKEFPF+LTK++ I MV+RLADDL+ GK F A AK++ +A+ ++ Y SL + G+ +F S D + Y + PS HYL D+W +F + PV++ WT EEY Q DG +L GDASFK+AK+IRL A R RPVYG FT+ NEY+Q +F RF+ +GFK+P ++
Sbjct: 42 QERFFQEVKDKIDRSITLEEGGVK--GRFPFDNPLVRPKCATFQ-------------------------------PSPGCGGKGAPDGWNPKGPRRVFTEHDVAYVMEFRYKCAKCAEFNKGKQEAEKHKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVNRLADDLVHGKDFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTS-SGIFRSANLANTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFPKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNEYEQ---------------------LFFMRFVRNGFKVPTLW 349
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Match: A0A6H5JE51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE51_9PHAE) HSP 1 Score: 211 bits (537), Expect = 5.260e-61 Identity = 93/142 (65.49%), Postives = 112/142 (78.87%), Query Frame = 2
Query: 1109 VWVPEYIWEHIDHIPCPHCGGRAQPDGWNTEPRRVFLEDDVCYLIGFRYECKKCTDDNKQRSEDERTTQTFNAWDPGVLARMDDFVSKEFPFVLTKKAAISKSMVDRLADDLLEGKGFGAVAKSLAKAYQGRYFSQ-VRSYV 1531
+WVPEY+W+ ID +PCP CG R QPDGWNT+ RRVFLE DVCY IG+RY CK+CTD N ++ ++RTT TFNAWDP VL RM+DFVSKEFPFVLT+K A S+S+VDRLADDLLEGKGF +KSL +Y Y VR+Y+
Sbjct: 1 MWVPEYMWDEIDCVPCPRCGERGQPDGWNTDARRVFLEQDVCYFIGYRYYCKRCTDANAMKNNEDRTTVTFNAWDPDVLGRMNDFVSKEFPFVLTRKGATSRSLVDRLADDLLEGKGFAVTSKSLLNSYTATYLKLIVRTYL 142
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE) HSP 1 Score: 216 bits (549), Expect = 5.380e-60 Identity = 127/235 (54.04%), Postives = 148/235 (62.98%), Query Frame = 2
Query: 1622 DPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREE------YLQLRAQLVDGRLLAGDASFKYAKVIRLATGADGSRARPVYGIFTIMNEYDQVVFSKAMSTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYPPSRRLR--AAGEEEEDSSVGFRLRVGAILGGSHT*PCLNRSAFAS*WHGLLLSSSTRREENECVH---LPDGPQNLLQN-PDIVKVGVSVNSDATYL 2290
DP G N PSAHYLGDIW+ WFYE P+V+ +W + YLQ RAQLVDGRLLAGDASFKYAKVIRL TG DG+RARPVYGIFTIMNEYDQVVFSKAM TASVHDLK+DLKMMFV+RF+GHGFKLPVI + + A G +++ +G LGG+ P G R N +P Q+LL+N P VGV+VNSDA+ L
Sbjct: 3 DPLGLNRRHPSAHYLGDIWHKWFYEMPMVK----TWVTTDALGHVNYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKSDLKMMFVQRFVGHGFKLPVILFTVDLAVAELAKGCQDQGDVLGLDCEWEPALGGATPNPVSTLQLSLP--DGTAYCFHLHRRTNRATATSTIPKVLQSLLENVPSQRYVGVNVNSDASLL 231
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Match: A0A6H5L553_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L553_9PHAE) HSP 1 Score: 208 bits (530), Expect = 8.400e-59 Identity = 112/229 (48.91%), Postives = 145/229 (63.32%), Query Frame = 2
Query: 1217 LEDDVCYLIGFRYECKKCTDDNKQRSEDERTTQTFNAWDPGVLARMDDFVSKEF-PFVLTKKAAISKSMVDRLADDLLEGKGFGAVAKSLAKAYQGRYFSQVRSYVSLAKRGLSKFRGLVGQHADPGVVPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEYLQLRAQLVDGRLLAGDASFKYAKVIRLATGADGSRARPVYGIFTIMNEYDQV 1900
+E+DV Y+IGFRY+C++C + N E E+ +FNAWD G L R+ D+VSKEF PF+LT ++ I +VDRLADDL GKGF A AK + +A+ ++ YVSL S L G A P V KF S D Y + PS HYL D+W T+F E PV++ G WT E+YL Q DG +LAGDASFK+AK+IRL A G R RPV+GIFT+ NEY+Q+
Sbjct: 1 MEEDVGYIIGFRYKCERCVEYNGTVEESEQRPTSFNAWDVGCLDRLPDYVSKEFFPFILTHRSGIDIRLVDRLADDLAHGKGFSAAAKYIRQAHTTKFMVYQLKYVSLNDARRSSRVSLFG--AAP-VPEKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVEGVKWTWEDYLPRVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTVFNEYEQI 226 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16649.1 >prot_C-linearis_contig9.16649.1 ID=prot_C-linearis_contig9.16649.1|Name=mRNA_C-linearis_contig9.16649.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=674bp MQAWRYIPVIALLVGLFGACDRSLTAEQSTTQSVFHNPEVPVPCFFPDHSback to top mRNA from alignment at C-linearis_contig9:2354802..2358245- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig9.16649.1 ID=mRNA_C-linearis_contig9.16649.1|Name=mRNA_C-linearis_contig9.16649.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3444bp|location=Sequence derived from alignment at C-linearis_contig9:2354802..2358245- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig9:2354802..2358245- >mRNA_C-linearis_contig9.16649.1 ID=mRNA_C-linearis_contig9.16649.1|Name=mRNA_C-linearis_contig9.16649.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4044bp|location=Sequence derived from alignment at C-linearis_contig9:2354802..2358245- (Chordaria linearis ClinC8C monoicous)back to top |