mRNA_C-linearis_contig9.16632.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Match: A0A6H5L3S1_9PHAE (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3S1_9PHAE) HSP 1 Score: 428 bits (1101), Expect = 2.860e-141 Identity = 284/548 (51.82%), Postives = 330/548 (60.22%), Query Frame = 1
Query: 1 WALDLQEKLGEAAELCTAVLGSAPRNARAFYVRAAALRKQGKRKEAVEAACEAARLRPDLPALVLAAGSLLCREKGFAHALALYETALEENPDKAQYHLGAAAALRKLGRSEEATAALLKAATAASTSPAGGNPPDVQLRAQVQYKLGQHLRSTGDPASCALAAEAYGRCLELDPGHTLAEFWLSATRKLAAVGGGEGASGERKTGPLPDVSGPLS---ERTSKNP--PTAAPREYVVGLYNAYAETFDSHLQEALEYRTPAVIVESLAVLFPGRRYRRCLDLGCGTGLSGQAASSVCGENLVGVDLSPAMVGRAKEKRLYRRLLVGDVTETVERLCRESKSITPAEGWAGT---RRPGVWEVPAAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECXXXXXXXXXXXXXXAS-------------SSAG-ERGELVISCDVFGYIGSLRACFKAVHDLVTGI-GSLMAEPQ--------EPGAIFAFSAEAPPATITTKSKGGR-------AVGGSQPGYELQGTGRW 1530
W ++KL EAAELC+AVL SAPRNAR Y+RA A ++ G+ KEA E AC+AARLRPDLP++ L AGSLLCR K F ALA+YE AL+ +P QYHLGAA+ALR+LGR + ATAA L AA+AA+++ DV +AQVQYKLGQHLRS GD AS A AA+AY RCLELDPGH LA FWL ATRKLAA E G G SG S + + P P +APREYVVGLYN+YAETFDSHLQ ALEYRTP VIVE+L LFP RR+ RCLDLGCGTGLSG+AASSVC LVGVDLSPAMV RA+EKR+Y RLLVG+VTETV RL R S+S P+E AG+ RR WEVPA E + S SS G + G+L++SCDVF YIG LRACF+AV LV G S +E + EP A+FAFSAEAPP+ T G A S GYELQGTGR+
Sbjct: 12 WQCLGEDKLDEAAELCSAVLRSAPRNARGLYLRAVASQRAGRPKEAAEDACQAARLRPDLPSVQLMAGSLLCRNKCFGRALAVYEKALDASPGNVQYHLGAASALRQLGRGDHATAAFLAAASAAASA-------DVGTQAQVQYKLGQHLRSMGDAASLAQAAQAYARCLELDPGHVLAAFWLPATRKLAASTLREAHDGVYVAG-----SGEASVAVDNAMETPATPASAPREYVVGLYNSYAETFDSHLQGALEYRTPTVIVENLRRLFPERRWDRCLDLGCGTGLSGRAASSVC-RRLVGVDLSPAMVRRAREKRVYHRLLVGEVTETVRRLSRRSES--PSEPGAGSSPRRRRARWEVPAMVEEEGGAAVAAMAVGGCGDGNGIDQMLPGTTVAEEASVEDVESPAAGSKRELAQPTEVTTLATLQSAPIETSSGTCGGTSSGGIDGGDLILSCDVFVYIGDLRACFEAVRGLVAGYQASAESETEAGRDPRREEPAAVFAFSAEAPPSEATDAGDSGGEKRTTADAADPSHRGYELQGTGRY 544
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Match: D7FSS7_ECTSI (Methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS7_ECTSI) HSP 1 Score: 425 bits (1093), Expect = 1.120e-140 Identity = 271/535 (50.65%), Postives = 316/535 (59.07%), Query Frame = 1
Query: 1 WALDLQEKLGEAAELCTAVLGSAPRNARAFYVRAAALRKQGKRKEAVEAACEAARLRPDLPALVLAAGSLLCREKGFAHALALYETALEENPDKAQYHLGAAAALRKLGRSEEATAALLKAATAASTSPAGGNPPDVQLRAQVQYKLGQHLRSTGDPASCALAAEAYGRCLELDPGHTLAEFWLSATRKLAAVGGGEGASGERKTGPLPDVSGPLSERTSKNPPTAAPREYVVGLYNAYAETFDSHLQEALEYRTPAVIVESLAVLFPGRRYRRCLDLGCGTGLSGQAASSVCGENLVGVDLSPAMVGRAKEKRLYRRLLVGDVTETVERLCRESKSITPAEGWAGTRRPGV-WEVPAAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECXXXXXXXXXXXXXXASSSAGER------GELVISCDVFGYIGSLRACFKAVHDLVTGIGSLMAEPQ----------EPGAIFAFSAEAPPATITTKSKGGR-------AVGGSQPGYELQGTGRWV 1533
W ++KL EAAELC+AVL SAPRNAR Y+RA A ++ G+ KE E AC+AARLRPDLP++ L AGSLLCR K F ALA+YE AL+ +P QYHLGAA+ALR+LGR ++ATAA L AA+AA+++ DV +AQVQYKLGQHLRS GD A AA+AY RCLELD GH LA FWL ATRKLAA E G GP + + + P +APREYVVGLYN+YAETFDSHLQ ALEYRTP VIVE+L LFPGRR+ RCLDLGCGTGLSG+AASSVC LVGVDLSPAMV RA+EKR+Y RLLVG+VTETV RL S+S + R P WEVPA E E + S G G+L++SCDVF YIG LRACF+AV +LV G AE + +P A+FAFSAEAPP G A S GYELQGTGR V
Sbjct: 12 WQCLQEDKLDEAAELCSAVLRSAPRNARGLYLRAVASQRAGRPKEGAEDACQAARLRPDLPSVQLMAGSLLCRNKCFGRALAVYEKALDVSPGNVQYHLGAASALRQLGRGDQATAAFLTAASAAASA-------DVGTQAQVQYKLGQHLRSMGDAVYFAQAAQAYARCLELDRGHVLAAFWLPATRKLAASTLREPHDGGYVAGPGEGSAAVDNAMETPASPASAPREYVVGLYNSYAETFDSHLQGALEYRTPTVIVENLRRLFPGRRWDRCLDLGCGTGLSGRAASSVC-RRLVGVDLSPAMVLRAREKRVYHRLLVGEVTETVRRLSSRSESASEPGAGLSARHPRARWEVPAMAEEEGGAAVAAVAVGGCGDGGGTGQMLPGTTVAGEASVEDEGELVPPTEVATLATLPSAPIVTGSGSCGGSSSDGIGGGDLILSCDVFVYIGDLRACFEAVRELVAG-DQASAESETDAGRDPRREKPAAVFAFSAEAPPPEAADAGDSGAEKRTTADAANPSHRGYELQGTGRCV 537
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Match: A0A835Z4Q9_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q9_9STRA) HSP 1 Score: 117 bits (294), Expect = 4.350e-25 Identity = 80/191 (41.88%), Postives = 104/191 (54.45%), Query Frame = 1
Query: 418 RAQVQYKLGQHLRSTGDPASCALAAEAYGRCLELDPGHTLAEFWLSATRKLAAVGGGEGASGERKTGPLPDVSGPLSERTSKNPPTAAPREYVVGLYNAYAETFDSHLQEALEYRTPAVIVESLAVLFPGRRYRRCLDLGCGTGLSGQAASSVCGENLVGVDLSPAMVGRAKEK--RLYRRLLVGDVTETV 984
RA Q+ QHLRS GD A A + R LDP + LA FW S +AA G G ASG G +P A PREY+ LY+ YA F+ HL + L+Y+T ++VE+L PGR + RC+DLGCGTGLSG A E+L GVDLS M+ +A+ K +Y RL+VG+ E +
Sbjct: 32 RALAQFA--QHLRSIGDHAQ---ALHEFERAAALDPANQLAAFWQS----VAAKGTGASASGG---GDVP----------------APPREYIEKLYDGYAAKFEEHLTKGLQYKTHELLVEALVKALPGRLWARCVDLGCGTGLSGVTARPHV-EHLTGVDLSKNMIAQARAKGTAVYNRLIVGECAEAL 193
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Match: A0A7S4D6U5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6U5_HETAK) HSP 1 Score: 104 bits (259), Expect = 4.910e-21 Identity = 71/203 (34.98%), Postives = 97/203 (47.78%), Query Frame = 1
Query: 424 QVQYKLGQHLRSTGDPASCALAAEAYGRCLELDPGHTLAEFWLSATRKLAAVGGGEGASGERKTGPLPDVSGPLSERTSKNPPTAAPREYVVGLYNAYAETFDSHLQEALEYRTPAVIVESLAVLFPGRRYRR----CLDLGCGTGLSGQAASSVCGENLVGVDLSPAMVGRAKEKRLYRRLLVGDVTETVERLCRESKSITP 1020
++ YK ++LR+ GD AAE + +CLEL P H+LAEFWL AV P+ P Y+ LYN YA F+ HL + L Y+TP VI L + R + LDLGCGTGLSG A V ++VGVDLS AM+ A++K +Y + V DV + +S++ P
Sbjct: 33 ELHYKYAKYLRNKGDKDK---AAEHFRKCLELQPDHSLAEFWLGTFGGSDAV------------------------------PSKCPENYIKKLYNGYASKFEEHLVKDLRYQTPTVINALLQQVTEERGWNSTNNAALDLGCGTGLSG-LAFKVHARSMVGVDLSEAMIEEARKKDIYNEVHVADVLGFLREKLIQSENYNP 201
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Match: A0A366FDZ0_9HYPH (Putative TPR repeat methyltransferase n=1 Tax=Roseiarcus fermentans TaxID=1473586 RepID=A0A366FDZ0_9HYPH) HSP 1 Score: 102 bits (253), Expect = 2.150e-20 Identity = 76/206 (36.89%), Postives = 103/206 (50.00%), Query Frame = 1
Query: 400 PPDVQLR----AQVQYKLGQHLRSTGDPASCALAAEAYGRCLELDPGHTLAEFWLSATRKL-----AAVGGGEGASGERKTGPLPDVSGPLSERTSKNPPTAAPREYVVGLYNAYAETFDSHLQEALEYRTPAVIVESLAVLFPGRRYRRCLDLGCGTGLSGQAASSVCGENLVGVDLSPAMVGRAKEKRLYRRLLVGDVTETVER 990
PPD + A +Y G+ GD + AA+ + + LE PG A F L+ R+ AAV GA P S L+ + P PR YV L++ YA F+ HL +AL YR PA+IVE+L + PGRR+ +DLGCG+GL G A G L GVDL+P+MV RA+E Y + D E ++R
Sbjct: 2 PPDTLVSQDPIADRRYVYGKGAADDGDFRT---AADLFEQALEQAPGWPAALFALAEARERLGERDAAVAAFRGALAADPGDPF-GASARLALIGATAQPDGLPRAYVTRLFDDYAPRFERHLLDALGYRAPALIVEALDAVAPGRRFASAIDLGCGSGLMGAAIRGRVGR-LDGVDLAPSMVARAREIGAYDAVETADAVERLDR 202
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Match: A0A4R6R9E0_9HYPH (Putative TPR repeat methyltransferase n=2 Tax=Oharaeibacter diazotrophicus TaxID=1920512 RepID=A0A4R6R9E0_9HYPH) HSP 1 Score: 99.4 bits (246), Expect = 1.850e-19 Identity = 75/192 (39.06%), Postives = 97/192 (50.52%), Query Frame = 1
Query: 415 LRAQVQYKLGQHLRSTGDPASCALAAEAYGRCLELDPGHTLAEFWLSATRKLAAVGGGEGASGERKTGPLP-DVSGP---LSERTSKNPPTAAPREYVVGLYNAYAETFDSHLQEALEYRTPAVIVESLAVLFPGRRYRRCLDLGCGTGLSGQAASSVCGENLVGVDLSPAMVGRAKEKRLYRRLLVGDVTE 978
L A +Y+ + + GD A+ AA+ Y + LE P A L R A A+ R P DV G L+ + P A P YV GL++ YA+ FD L E L YRTP + LA + P R+ R LDLGCGTGL+G A + L GVDLSPAMV +A++K Y L VGDV +
Sbjct: 9 LVADRRYEWARGYAAAGDHAA---AADLYAQALEAAPDWLPALVGLGEARAAAGEADAAAAAFRRALALDPADVHGAGLKLAALGAAAAPAAPPAAYVRGLFDGYADRFDRALVEDLGYRTPWRLGALLAAVRPDARFARVLDLGCGTGLTG-AVLRPAADRLEGVDLSPAMVAKARDKGDYDALAVGDVVD 196
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Match: A0A6N6MKB1_9HYPH (Methyltransferase domain-containing protein n=1 Tax=Methylobacterium sp. YIM 132548 TaxID=2615211 RepID=A0A6N6MKB1_9HYPH) HSP 1 Score: 98.6 bits (244), Expect = 4.340e-19 Identity = 71/176 (40.34%), Postives = 92/176 (52.27%), Query Frame = 1
Query: 454 RSTGDPASCALAAEAYGRCLELDPGHTLAEFWLSATRKLAAVGGGEGASGERKTGPLPDVSGPLSERTSKNPPTAAPREYVVGLYNAYAETFDSHLQEALEYRTPAVIVESLAVLFPGR--RYRRCLDLGCGTGLSGQAASSVCGENLVGVDLSPAMVGRAKEKRLYRRLLVGDVT 975
R++G A A AY L+LDP L + +L +GGGE A G LS YV L++ YA FD HL E L YR P ++ ++L L PG RY LDLGCGTGL G A + G +L GVDLSPAM+ +A+ +RLY+RL+VGD+T
Sbjct: 66 RASGGEADFHAALRAYSAALDLDPDDA-----LGSRVRLVQLGGGEAA-------------GALSPA------------YVRALFDGYAARFDRHLVEGLHYRGPEMLRDALEAL-PGAPARYAVALDLGCGTGLVGAAFAGRVG-HLTGVDLSPAMLAQAERRRLYQRLVVGDLT 209
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Match: A0A850SR75_9PROT (Methyltransferase domain-containing protein n=1 Tax=Parvularculaceae bacterium TaxID=2510335 RepID=A0A850SR75_9PROT) HSP 1 Score: 97.8 bits (242), Expect = 5.970e-19 Identity = 79/195 (40.51%), Postives = 99/195 (50.77%), Query Frame = 1
Query: 415 LRAQVQYKLGQHLRSTGDPASCALAAEAYGRCLELDPGHTLAEFWLSATRKLAAVGGGEGASGERKTGPLPD-VSGPLSE--RTSKNPPTAAPREYVVGLYNAYAETFDSHLQEALEYRTPAVIVESLAVLFPGRRYRRCLDLGCGTGLSGQAASSVCGENLVGVDLSPAMVGRAKEKRLYRRLLVGDVTETVER 990
L A +Y G+ GD S AA+ + + LEL PG T A F L R+ A G A+ R PD V G E R AAP YV L++AYA+ FD L L YR P ++ +LA RR+ R LDLGCGTGLSG AA + L GVDLS AM+ RA+ K +Y LL E ++R
Sbjct: 11 LLADRRYAYGEASAKAGDLVS---AADLFEQALELAPGWTDAWFALGLARRDAGQPGRARAAFARCLALDPDDVLGAGLELARLGVGTLAAAPPAYVAALFDAYADDFDDALAGRLGYRAPQLVAAALA----DRRFARVLDLGCGTGLSG-AALRPLSDYLEGVDLSDAMLARARSKEVYDALLRASFEERLDR 197
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Match: UPI00166D480D (methyltransferase domain-containing protein n=1 Tax=Brucella endophytica TaxID=1963359 RepID=UPI00166D480D) HSP 1 Score: 97.4 bits (241), Expect = 8.530e-19 Identity = 69/182 (37.91%), Postives = 97/182 (53.30%), Query Frame = 1
Query: 433 YKLGQHLRSTGDPASCALAAEAYGRCLELDPGHTLAEFWLSATRKLAAVGGGEGASGERKTGPLPDVSGPLSERTSKNPPTAAPREYVVGLYNAYAETFDSHLQEALEYRTPAVIVESLAVLFPGRRYRRCLDLGCGTGLSGQAASSVCGENLVGVDLSPAMVGRAKEKRLYRRLLVGDVTE 978
++LG+ G P + AA+A+ LE DP E A+ KLA++G L+ R P A P YV L++AYA TF++ L E L+YR P ++ E++A RRYRR +DLGCGTGL G+ + + L G+DLS AM+ +A+EK +Y RL GDV E
Sbjct: 51 FRLGEMEEEAGHPEA---AAKAWRSVLEADP-----EDRFGASLKLASIG--------------------LAAR-----PDAPPTAYVETLFDAYAPTFETALIEKLDYRVPELLAEAIARA-GNRRYRRAMDLGCGTGLMGERLRATT-DYLEGIDLSDAMLRKAEEKGIYDRLEKGDVNE 197
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Match: A0A7V7TVB9_9HYPH (Methyltransferase domain-containing protein n=1 Tax=Aureimonas leprariae TaxID=2615207 RepID=A0A7V7TVB9_9HYPH) HSP 1 Score: 97.1 bits (240), Expect = 1.160e-18 Identity = 64/178 (35.96%), Postives = 87/178 (48.88%), Query Frame = 1
Query: 439 LGQHLRSTGDPASCALAAEAYGRCLELDPGHTLAEFWLSATRKLAAVGGGEGASGERKTGPLPDVSGPLSERTSKNPPTAAPREYVVGLYNAYAETFDSHLQEALEYRTPAVIVESLAVLFPGRRYRRCLDLGCGTGLSGQAASSVCGENLVGVDLSPAMVGRAKEKRLYRRLLVGDV 972
LG++L +G+P + AAEA R LDP A +LAA+G P A P +V L++ YAE F++HL L YR P +++ ++ P RR+ LDLGCGTGL G+ S C E L GVDLS AM+ +A+ K LY L GD+
Sbjct: 53 LGEYLEQSGEPGA---AAEALSRAAALDPADA-----SGAGARLAAMGRAPA-------------------------PAALPPAFVATLFDQYAERFEAHLTRKLAYRAPDLLLRAIRNAAPDRRFEAALDLGCGTGLMGEKLRSSC-ERLDGVDLSSAMLAKARAKNLYDALREGDI 196 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16632.1 >prot_C-linearis_contig9.16632.1 ID=prot_C-linearis_contig9.16632.1|Name=mRNA_C-linearis_contig9.16632.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=511bp WALDLQEKLGEAAELCTAVLGSAPRNARAFYVRAAALRKQGKRKEAVEAAback to top mRNA from alignment at C-linearis_contig9:2170856..2173444+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig9.16632.1 ID=mRNA_C-linearis_contig9.16632.1|Name=mRNA_C-linearis_contig9.16632.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2589bp|location=Sequence derived from alignment at C-linearis_contig9:2170856..2173444+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig9:2170856..2173444+ >mRNA_C-linearis_contig9.16632.1 ID=mRNA_C-linearis_contig9.16632.1|Name=mRNA_C-linearis_contig9.16632.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3066bp|location=Sequence derived from alignment at C-linearis_contig9:2170856..2173444+ (Chordaria linearis ClinC8C monoicous)back to top |