mRNA_C-linearis_contig9.16596.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16596.1
Unique NamemRNA_C-linearis_contig9.16596.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 3.470e-35
Identity = 135/368 (36.68%), Postives = 185/368 (50.27%), Query Frame = 1
Query:  166 VEEMLRASGSAEGSAELIEGTEYAFPPLIYAVYNEKAEMVRLLLDHGAKVDSRTC----CTTEGNRIPIGFTALHSAASQGKLEFVLMLLEAGASPNIQDDEGSTPLLYVTKFEDT---EHHVAISRALLXXXXXXXXXDVREGTPFHVAAGRGSIEVVDMLLDKAPSALNLTTATGATALYLAATEPGLDYMVSHLLSRGATNEPVLGNGS-CPLAGAVHYALESIVEVILKE-GWKAVGGAIALPRAIHLASIKDLPRTLL--MLLDAEGPDKRQSWSRCVNVDFFISPLHVAIASDSVRAVSVLLQAGANEGVLVNRIFNQYNHQNRMIFMPRTP--KRDQASKAAVRRTVARAAAFRARSWAWP 1230
            VE  L A  S +GS+EL       + P+I A  + K  M  LL+   A VD  +     C+     +  G  ALH A +   ++   +LL+AGA P+  + +G TPL+     ED+   E    ++R   XXXXXXXXX     T    AA R    ++D+LL KAP+ LN  T  G T LY AA   G    VSHLLS GA   P       CPL  AV    + +V V+L + G KA+GGA  +PRA+  A+     R  +  MLL AEG ++   W+RC   +  +  LH A++  ++ A  VLL AGA+E        N+     R +     P  +RD A K A+ R + R  A+RARSWAWP
Sbjct:  126 VERTLAAGASVDGSSEL------DWRPIIAAAASCKVGMAELLIKRKADVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMS-GKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPV--LHSAVSFGNISATRVLLAAGADETAE-----NEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWP 479          
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 8.140e-35
Identity = 122/363 (33.61%), Postives = 184/363 (50.69%), Query Frame = 1
Query:  142 VIHGHVQEVEEMLRASGSAEGSAELIEGTEYAFPPLIYAVYNEKAEMVRLLLDHGAKVDSRTCCTTEGNRIPIGFTALHSAASQGKLEFVLMLLEAGASPNIQDDEGSTPLLYVTKFEDTEHHVAISRALLXXXXXXXXXDVREGTPFHVAAGRGSIEVVDMLLDKAPSALNLTTATGATALYLAATEPGLDYMVSHLLSRGATNEPVLGNGSCPLAGAVHYALESIVEVILKEGWKAVGGAIALPRAIHLASIKDLPRTLLMLLDAEGPDKRQSWSRCVNVDFFISPLHVAIASDSVRAVSVLLQAGANEGVLVNRIFNQYNHQNRMIFMPRTPKRDQASKAAVRRTVARAAAFRARSWAWP 1230
            V  G++  V+++L    + +GS EL       +PP++ A  N  A M++LL+  GA +++         R P G  A+H+A S      + +LLEAGA  N +D  G TPL+ +T   DT     ++R L          +    +  HVAAG G++EV+ ++L   PSALN+    G T + +AA   G    V HLLS GA++  V    +  +  A       +V ++L+ G   VGG  A+P +I +A      + L ML+ AEG + R+ W+ C   D   +PLH+A A  SVRA+ VLL AGA E  L N      + +  +   P   +R    +AAV R + R  A+RARS+ WP
Sbjct:   15 VEKGNLSGVKKLLAGGANVDGSREL------EYPPIMGAARNGNAAMLKLLISKGADLETEA-------RFPAGSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLM-LTALADTG--ALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALR-GQRRAVFHLLSAGASDLGV-DEQNAAILWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDG--TPLHLAAAWVSVRAIHVLLSAGARE-TLPNGYGKLASEEVGIALRP-PARRSPRKEAAVVRMLQRGPAYRARSYGWP 355          
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 1.780e-33
Identity = 132/368 (35.87%), Postives = 184/368 (50.00%), Query Frame = 1
Query:  166 VEEMLRASGSAEGSAELIEGTEYAFPPLIYAVYNEKAEMVRLLLDHGAKVDSRTC----CTTEGNRIPIGFTALHSAASQGKLEFVLMLLEAGASPNIQDDEGSTPLLYVTKFEDT---EHHVAISRALLXXXXXXXXXDVREGTPFHVAAGRGSIEVVDMLLDKAPSALNLTTATGATALYLAATEPGLDYMVSHLLSRGATNEPVLGNGS-CPLAGAVHYALESIVEVILKE-GWKAVGGAIALPRAIHLASIKDLPRTLL--MLLDAEGPDKRQSWSRCVNVDFFISPLHVAIASDSVRAVSVLLQAGANEGVLVNRIFNQYNHQNRMIFMPRTP--KRDQASKAAVRRTVARAAAFRARSWAWP 1230
            VE  L A  S +GS+EL       + P+I A  +    M  LL+   A VD  +     C+     +  G  ALH A +   ++   +LL+AGA P+  + +G TPL+     ED+   E    ++R   XXXXXXXXX     T    AA R   +++D+LL KAP+ LN  T  G T LY AA   G    VSHLLS GA   P       CPL  AV    + +V V+L + G +A+ G   +PRA+  A+     R  +  MLL AEG ++   W+RC   +  +  LH A++  ++ A  VLL AGA+E        N+     R +     P  +RD A K A+ R +AR  A+RARSWAWP
Sbjct:  134 VERTLAAGASVDGSSEL------DWRPIIAAAASGSVGMADLLIKRQANVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMS-GKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPV--LHCAVSFGNISATRVLLAAGADETAE-----NEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAWP 487          
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Match: D7FLL0_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL0_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 8.890e-26
Identity = 131/422 (31.04%), Postives = 192/422 (45.50%), Query Frame = 1
Query:  256 AVYNEKAEMVRLLLDHGAKVDSRTCCTTEGNR--------IPI-GFTALHSAASQGK-LEFVLMLLEAGASPNIQDDEGSTPLLYVTKFEDTEHHVAIS-RALLXXXXXXXXXDVREGTPFHVAAGRGSIEVVDMLLDKAPSALNLTTATGATALYLAATEPGLDYMVSHLLSRGATNEPVLGNGSCPLAGAVHYALESIVEVILKEGWKAVGGA-IALPRAIHLASIKDLPRTLLMLLDAEGPDKRQSWSRCVNVDFFI--SPLHVAIASDSVRAVSVLLQAGANEGVLVNR------IFNQYNHQNRMI--FMPRTPKR--DQASKAAVRRTVARAAAFRARSWAWPVAVVVVGRDAAAVAAPVXXXXXPAESEIGGGGKQPFFVLGANRRPIAPLGVIIHRPRRSMWLVGLVSRHALKR 1449
            A  + + E+ +LL++ GA V++     + G R        +P+ G  A H+A    K ++ V +LL AGA P+  +  G TPL+ + + E     +  +   L+         D    T F  A   G+ E +  +L  +P+AL      G +ALY+A  E  L  +VS LLS GA +        CPLA A+    E IV+++L     AVGG  +A   A+  A  +   + L M+L+  G +    W+   + D+ +  S LH +       +VS LL AGANE            +    + QN  +    PRTP R  D   +A +RRTV RA AFRARSWAWP          AA+            S   G  K      G  R+   PL V IHRP R+  L G+++R+  KR
Sbjct:    2 AAVHAQTEIAQLLIERGAHVNAGVTNPSMGTRERVVNSTFLPMQGENAFHAAICFAKKMDLVDLLLRAGADPSAGNKLGITPLMCLAREEPPGPWLECALEVLIKAGVNPDQVDAEGWTAFLHAVEVGNPEKIRRILALSPAALGRIAWDGMSALYVACNEGHLS-VVSCLLSLGAKHPRTTIRDHCPLAVAIIKGHEDIVKILLAN-LSAVGGVELAAEMALTCAITQSRGKILRMMLNITGEENAARWA---DSDWGLAGSLLHYSCGYILPASVSALLAAGANENATDQAGQRPIDVIGTMDLQNPPLSPLHPRTPTRFRDPVKEAEIRRTVERAPAFRARSWAWPAFEWAGCSTTAAICG---------SSTCNGLTK----ASGQGRKTRTPLVVQIHRPERNKLLSGILTRYQQKR 405          
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Match: D7FVG9_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG9_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 9.820e-18
Identity = 91/324 (28.09%), Postives = 137/324 (42.28%), Query Frame = 1
Query:  142 VIHGHVQEVEEMLRASGSAEGSAELIEGTEYAFPPLIYAVYNEKAEMVRLLLDHGAKVDSRTCCTTEGNRIPIGFTA------LHSAASQGKLEFVLMLLEAGASPNIQDDEGSTPLLYVTKFEDT-EHHVAISRALLXXXXXXXXXDVREGTPFHVAAGRGSIEVVDMLLDKAPSALNLTTATGATALYLAATEPGLDYMVSHLLSRGATNEPVL-------GNGSCPLAGAVHYALESIVEVILKEGWKAVGGAIALPRAIHLASIKDLPRTLLMLLDAEGPDKRQSWSRCVNVDFFISP-LHVAIASDSVRAVSVLLQAGA 1068
            V  G +   + +L A  S +GS +L         PL  A      +M  LL++ GAK+D         NR+    T       +H+A   G+ E   +L+ AGA PN+ + +G TPL+     +    H  +I R LL         D  + T  H AAG+G +E++DML  KAP+ L+     G T L  AA                                  CPL  A+     ++V+V+L +    +  ++    AI  A +    R L  L+ A G +++Q  S    + F  SP LH+A+A  +    SVLL AGA
Sbjct:   11 VSRGDLARTQALLAAGASVDGSRKL------DCCPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVH-NRLTGSLTMAKGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRVGPHRASIVRELLDGGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHRAGRDGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLL-DNLDPIKSSVDFGTAISSALVTKRARLLSRLVSAVGEERKQKKS-LAGMTFSSSPILHIAVAQANPLTTSVLLAAGA 325          
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Match: A0A6H5L2Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q3_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.650e-17
Identity = 101/337 (29.97%), Postives = 163/337 (48.37%), Query Frame = 1
Query:  244 PLIYAVYNEKAEMVRLLLDHGAKVDSRTCCTTEGNRIPIGFTALHSAASQGKLEFVLMLLEAGASPNIQDDEGSTPLLYVTKFEDTEHH-VAISRALLXXXXXXXXXDVREGTPFHVAAGRGSIEVVDMLLDKAPSALNLTTATGATALYLAATEPGLD----YMVSHLLSRGA-TNEPVLGNGSCPLAGAVHYALESIVEVILKEGWKAVGGAI-ALPRAIHLASIKDLPRTLLMLLDAEGPDKRQSWSRCVNVDFFISPL-HVAIASDSVRAVSVLLQAGANEGVLVNRIFNQYNHQNRMIFMPRTPKRDQASKAAVRRTVARAAAFRARSWAWP 1230
            PL+ A  +   E+V  LL +GA+++ +T    + +R  +G  A H A + GKL+ +L+LL+AGA  +  + +G T L+     + +    VA+++ALL         D       H AA +G+  ++D+LL    S+L+    +  +       +  L+      V+HLLS GA       G G+  L  AV    E IV V+ + G ++VGGA   +P ++  A+     R L +LL     D+   +    N   +  PL +VA    +V  V VLL AGA+E V  +      +    ++         ++ KAA+RRT+ R  A+RARSW WP
Sbjct:   42 PLMVASGSGSVEVVNFLLQNGAEMEHQTW-GDDDHRF-LGMRATHWAVTSGKLDTLLVLLKAGAVYDAVNAQGETCLMNACMTDASPPTCVAMAKALLDAGADPLIEDREGQVALHHAAAQGNPNMIDLLLQAKGSSLSKKLLSHVSRWEHTPLQSALESNQVQAVAHLLSLGARATVDREGRGNL-LRRAVVKNSEPIVRVLFEAGLESVGGAARVMPDSLASAAKAGRTRLLKLLLTVGRGDRTTGY--WANYYVWGGPLLNVAAGYATVDCVGVLLAAGADERVPDDERQTAGDMIGDLLASGSKSASFRSDKAAIRRTLLRGPAYRARSWTWP 373          
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Match: A0A6H5JQQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ9_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 5.890e-10
Identity = 111/409 (27.14%), Postives = 156/409 (38.14%), Query Frame = 1
Query:  244 PLIYAVYNEKAEMVRLLLDHGAKVDSRTCCTTEGNRIPIGFTALHSAAS-QGKLEFVLMLLEAGASPNIQDDEGSTPLLYVTKFEDTEHHVAISRALLXXXXXXXXXDVREGTPFHVAAGRGSIEVVDMLLDKAPSALNLTTATGATALYLAATEPGLDYMVSHLLSRGATNEPVLGNGSCPLAGAVHYALESIVEVILKEGWKAVGGA-IALPRAIHLASIKDLPRTLLMLLDAEGPDKRQSWSRCVNVDFFISPLHVAIASDSVRAVSVLLQAGANE------GVLVNRIFNQYNHQNRMI--FMPRTPKR--DQASKAAVRRTVARAAAFRARSWAWPVAVVVVGRDAAAVAAPVXXXXXPAESEIGGGGKQPFFVLGANRRPIAPLGVIIHRPRRSMWLVGLVSR 1434
            PL+ A  + + E+ +LL++ GA V++     + G R        H A    G LE   +L++AG +P+  D EG T  L+                            V  G P          E +  +L  +P+AL      G  AL++A  E  L   VS  LS G  +        CPLA A+    E I   +L     AVGG  +A   A   A  +   + L M+L+  G                          ++    + LL AGANE      G     +    + QN  +    PRTP R  D   +A +RRTV RA AFRA SWAWP      G   +  AA          ++  G G          R+   PL V IHRP R+  L  ++ R
Sbjct:   20 PLVMAAVHAQTEIAQLLIERGAHVNAGVTNASMGTR-----ERSHRAPGLSGALE---VLIKAGVNPDQVDAEGWTTFLHA---------------------------VEVGNP----------EKIRRILALSPAALGRIAWDGMLALHVACNEGHLS-AVSWPLSLGTKHPKTTSRDHCPLAVAIIKGHEDIANTLLAN-LSAVGGVELAAEMAPTYAITQSRGKILRMMLNITG-------------------------EENAPGGNALLAAGANENATGQGGQRPIDVIGTIDLQNPPLSRLHPRTPTRFRDPVKEAEIRRTVERAPAFRAWSWAWP---AFEGAGCSTTAAIFGSSTCNVLNKASGQG----------RKTRTPLVVQIHRPERNKLLSRILRR 343          
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Match: A0A7L0N354_9PASS (ASB3 protein (Fragment) n=1 Tax=Formicarius rufipectus TaxID=1118560 RepID=A0A7L0N354_9PASS)

HSP 1 Score: 68.6 bits (166), Expect = 2.300e-8
Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 1
Query:  208 AELIEGTEYAFPPLIYAVYNEKAEMVRLLLDHGAKVDSRTCCTTEGNRIPIGFTALHSAASQGKLEFVLMLLEAGASPNIQDDEGSTPLLYVTKF 492
            A+L + T  A  PL  AV N  AE+V+ LL HGAKV+   C +        G+ +LH A+ QG  E + +LLE GAS N +DD G TPL    ++
Sbjct:  103 ADLNDVTTDATTPLFLAVENRHAEVVKFLLQHGAKVEGAHCWS--------GWNSLHQASFQGSTEIMEILLEKGASKNCRDDFGITPLFVAAQY 189          
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Match: UPI001472066F (dynein heavy chain 12, axonemal n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001472066F)

HSP 1 Score: 65.5 bits (158), Expect = 2.310e-7
Identity = 45/131 (34.35%), Postives = 63/131 (48.09%), Query Frame = 1
Query:  244 PLIYAVYNEKAEMVRLLLDHGAKVDSRTCCTTEGNRIPIGFTALHSAASQGKLEFVLMLLEAGASPNIQDDEGSTPLLYVTKFEDTEHHVAISRALLXXXXXXXXXDVREGTPFHVAAGRGSIEVVDMLLD 636
            PL+ A+ N+  ++  LLL   AKVD         N  P+  TALH +A  G   FV +LLE+GA+PNI D +  TPL    +      H+ +  ALL             GT    AA  G+  ++ +LLD
Sbjct:  153 PLVAAILNDHYDLATLLLRWNAKVD---------NTGPLNRTALHESAFLGLENFVYLLLESGANPNICDIKKKTPLALAAQ----NGHLHVVEALLQKGARVWCESEESGTILFDAAASGNPAIISLLLD 270          
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Match: UPI001FB8374C (transient receptor potential channel pyrexia-like n=1 Tax=Penaeus chinensis TaxID=139456 RepID=UPI001FB8374C)

HSP 1 Score: 61.6 bits (148), Expect = 4.640e-6
Identity = 82/325 (25.23%), Postives = 134/325 (41.23%), Query Frame = 1
Query:  244 PLIYAVYNEKAEMVRLLLDHGAKVDSRTCCTTEGNRIPIGFTALHSAASQGKLEFVLMLLEAGASPNIQDDEGSTPLLYVTKFEDTEHHVAISRA-------LLXXXXXXXXXDVREGTPFHVAAGRGSIEVVDMLLDKAPSAL---NLTTATGATALYLAATEP---GLDYMVSHL---LSRGATNEPVLGN-GSCPLAGAVHYALESIVEVILKEGWKAVGGAIALPRAIHLASIKDLPRTLLMLLDAEG---------PDKRQ-------SWSRCVNVDFFISPLHVAIASDSVRAVSVLLQAGANEGVLVNRIFNQYNHQN 1119
            P+ YA + +   ++R+LLDHGAK+         G+   +G T LH A +   ++ V  LL+ GASPN ++   ST    V    +T  H AI R        ++         D    +  H+AA   ++E+V  L+++ P+A+   N     G T L    +E      + +V  L   LSR   +       G  PL  A  Y L  +VE++L  G             +H A +     TL +LL  +           DK +       SWS        I+  H+A   D V    ++L+   +   ++ ++FN + H +
Sbjct:  149 PIHYACHKQNIRILRVLLDHGAKI---------GSMDTLGNTPLHLAVNDTWIDGVSELLKRGASPNAKNAPPSTIKEVVV---ETPLHAAIRRRDTASVTLMMEHEPDLSILDGNNCSVLHLAAQTRNLELVRKLVNQ-PTAVKECNNKDKNGRTVLLAVLSEKCDEDSELLVIELIKILSRSVVDINATNYVGETPLFLASRYGLSRVVELLLSLGSDPTILTTWKQSVLHAACLSGSSDTLDILLQRDDLKNMVTVVDNDKCRAFDYAVRSWSVHCCYLLLINGEHLANIKDGVSNCELMLEHLPSASQVLKKLFNSHVHMS 460          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D8LSK8_ECTSI3.470e-3536.68Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JK53_9PHAE8.140e-3533.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSC7_9PHAE1.780e-3335.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLL0_ECTSI8.890e-2631.04Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FVG9_ECTSI9.820e-1828.09Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
A0A6H5L2Q3_9PHAE1.650e-1729.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQQ9_9PHAE5.890e-1027.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7L0N354_9PASS2.300e-842.11ASB3 protein (Fragment) n=1 Tax=Formicarius rufipe... [more]
UPI001472066F2.310e-734.35dynein heavy chain 12, axonemal n=1 Tax=Thalassoph... [more]
UPI001FB8374C4.640e-625.23transient receptor potential channel pyrexia-like ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1698460..1702077 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score173.3
Seed ortholog evalue2.6e-40
Seed eggNOG ortholog2880.D8LDZ2
KEGG koko:K10380
KEGG Pathwayko04624,ko05205,map04624,map05205
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons3
Model size2061
Cds size1392
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16596.1prot_C-linearis_contig9.16596.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 1698520..1701468 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930739.748264-UTR-C-linearis_contig9:1698459..16985191622930739.748264-UTR-C-linearis_contig9:1698459..1698519Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1698460..1698519 +
1690881224.4076188-UTR-C-linearis_contig9:1698459..16985191690881224.4076188-UTR-C-linearis_contig9:1698459..1698519Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1698460..1698519 +
1622930739.8244255-UTR-C-linearis_contig9:1701468..17020771622930739.8244255-UTR-C-linearis_contig9:1701468..1702077Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1701469..1702077 +
1690881224.4557803-UTR-C-linearis_contig9:1701468..17020771690881224.4557803-UTR-C-linearis_contig9:1701468..1702077Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1701469..1702077 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930739.7689226-CDS-C-linearis_contig9:1698519..16985351622930739.7689226-CDS-C-linearis_contig9:1698519..1698535Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1698520..1698535 +
1690881224.423418-CDS-C-linearis_contig9:1698519..16985351690881224.423418-CDS-C-linearis_contig9:1698519..1698535Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1698520..1698535 +
1622930739.7874424-CDS-C-linearis_contig9:1699416..17007731622930739.7874424-CDS-C-linearis_contig9:1699416..1700773Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1699417..1700773 +
1690881224.4349582-CDS-C-linearis_contig9:1699416..17007731690881224.4349582-CDS-C-linearis_contig9:1699416..1700773Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1699417..1700773 +
1622930739.807782-CDS-C-linearis_contig9:1701449..17014681622930739.807782-CDS-C-linearis_contig9:1701449..1701468Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1701450..1701468 +
1690881224.4460669-CDS-C-linearis_contig9:1701449..17014681690881224.4460669-CDS-C-linearis_contig9:1701449..1701468Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1701450..1701468 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16596.1

>prot_C-linearis_contig9.16596.1 ID=prot_C-linearis_contig9.16596.1|Name=mRNA_C-linearis_contig9.16596.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=464bp
MEKVKEDAAEGKGGLKDPDTHDRFTDLVIHGHVQEVEEMLRASGSAEGSA
ELIEGTEYAFPPLIYAVYNEKAEMVRLLLDHGAKVDSRTCCTTEGNRIPI
GFTALHSAASQGKLEFVLMLLEAGASPNIQDDEGSTPLLYVTKFEDTEHH
VAISRALLEAGADPLLRDVREGTPFHVAAGRGSIEVVDMLLDKAPSALNL
TTATGATALYLAATEPGLDYMVSHLLSRGATNEPVLGNGSCPLAGAVHYA
LESIVEVILKEGWKAVGGAIALPRAIHLASIKDLPRTLLMLLDAEGPDKR
QSWSRCVNVDFFISPLHVAIASDSVRAVSVLLQAGANEGVLVNRIFNQYN
HQNRMIFMPRTPKRDQASKAAVRRTVARAAAFRARSWAWPVAVVVVGRDA
AAVAAPVASAAAPAESEIGGGGKQPFFVLGANRRPIAPLGVIIHRPRRSM
WLVGLVSRHALKR*
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mRNA from alignment at C-linearis_contig9:1698460..1702077+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16596.1 ID=mRNA_C-linearis_contig9.16596.1|Name=mRNA_C-linearis_contig9.16596.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3618bp|location=Sequence derived from alignment at C-linearis_contig9:1698460..1702077+ (Chordaria linearis ClinC8C monoicous)
GTTCGCCAAGAAGCTTCAGGCTCACACGGAGTTGATACAAGGGTTCTCGA AGGCGCTGCTATGGAAAAGGTGAAAGGTAAGTGCGCTGTGGTATGTCGGT GATGGCTTCGGATGAGACACACGTGCGTCTGTGTGTGTGTGTCTGTGATG TAGGTGTGTGTTTTCGTTTTCGTCCCATTTATTTTGGCGACACAGCAGTC CCTTTCCGATCAAGGCGAGACGTGTACTGCAAGTTGCGGTGTATTTAGAG TACTAGACTCCACTTGTTCAGTGTATTTTTCTGTGCAACTTGAACCAATC GGGGTCACACAGGAGGGGGTAAACACTGGGGCTCCTTCTTTTTCTGTTTC TTTTTTGCCCCACCTTCCTCCTGCGGTGCTTGCCTTGGATTTTATCGCGA GAAGGGTGCGCAGCCATCCCTTTCCCTCGTCAACGTGCTAAGTCGAAGTT TGGTACTCACGAGCTTTTCCAGCTAGTTATCGCTTTCACCGGCAAAGTCG CAAAATAATCATCTTTGCTTGGAATTGAACTCCAGACTTTGCTGCGATAG TGGGTTCGAGGTTAACCCACTAGGCCACCGGGGCGACCGGGACGAATGCT CGTTGTCAAACCAGCAGGCACTAGATACGACGCATGATAGACCGTTTCGT ATCTGGACGAGGACTCTCATGGACAGCCGTGATGATCCCGTTTACCGTCA TAAGCGCAAACAATAGTTTGCCGCGTCTTGCCGAGGTGATAAAAGGAGGT TCGTGCGCAACCGGCGGGAAAAAACAATCTGTAGTCCAGATCTTCAACAA GCGTGCCGTTTTCGCCAGAGAGACCCCCCCCCCACTCACCTTTTTCGGTC TAGGGCATGATTTATTTGAGTTCCCCAGGGGGGCGTCACTCTTTTCCTCT CTTTTAACCCTGGGATGGCCAACCGCTACATACCTCGTATCCACCAATAC CTAGCAGAGGATGCCGCCGAAGGCAAAGGTGGGCTCAAGGACCCGGACAC CCACGACAGGTTCACCGACCTGGTCATTCACGGACACGTGCAAGAGGTCG AGGAGATGCTGCGGGCCAGCGGCTCCGCGGAGGGCTCCGCGGAGCTGATC GAAGGCACGGAATACGCTTTCCCGCCGCTTATTTATGCGGTCTACAACGA AAAGGCCGAGATGGTGCGGCTCCTGCTCGACCACGGCGCCAAGGTCGACT CGCGGACCTGCTGCACAACCGAGGGGAACCGGATTCCTATCGGGTTCACG GCCCTCCACTCCGCGGCGTCGCAGGGGAAGCTCGAGTTCGTGCTCATGCT GCTGGAGGCCGGGGCGTCGCCGAACATCCAGGACGACGAGGGGAGCACGC CGCTGCTGTACGTTACCAAGTTCGAGGACACGGAGCACCACGTCGCCATC AGTCGGGCCCTGCTGGAGGCCGGCGCGGACCCGCTCCTCAGGGACGTCAG AGAGGGGACGCCCTTCCACGTCGCGGCTGGCCGGGGCAGCATAGAAGTGG TGGACATGTTGTTGGACAAGGCGCCGTCCGCCCTCAACCTGACCACCGCC ACCGGCGCTACTGCGTTGTACCTGGCGGCGACAGAGCCCGGGTTGGACTA TATGGTGTCTCACCTGCTATCCAGGGGGGCCACGAATGAGCCTGTGCTAG GCAATGGCAGCTGCCCGCTCGCAGGGGCCGTGCACTACGCCCTGGAGAGC ATAGTCGAGGTCATCCTGAAGGAAGGTTGGAAGGCGGTGGGGGGGGCCAT AGCCCTTCCTCGGGCAATCCACCTTGCCTCCATCAAGGACCTCCCGCGGA CGCTGCTGATGCTCCTGGACGCTGAAGGGCCGGACAAGCGGCAGTCCTGG TCGAGGTGCGTCAACGTCGACTTCTTCATATCCCCGCTCCATGTGGCCAT CGCCTCCGACAGCGTCCGCGCCGTGAGCGTCCTGCTGCAGGCCGGGGCGA ACGAGGGAGTCCTCGTTAATAGGATCTTCAACCAGTACAACCACCAGAAT AGGATGATCTTCATGCCCCGCACGCCCAAGAGGGACCAGGCGAGCAAGGC GGCGGTCAGGAGGACGGTGGCACGGGCCGCGGCCTTTCGAGCTCGGTCGT GGGCGTGGCCTGTTGCTGTGGTTGTTGTTGGACGGGATGCTGCTGCGGTT GCTGCTCCTGTCGCATCTGCTGCTGCTCCTGCTGAGAGTGAGATTGGTGG TGGTGGCAAGCAGCCCTTTTTCGTGTTAGGCGCCAACAGGAGACCTATCG CGCCGTTGGGTGTGATAATCCACCGACCTAGGAGGAGCATGTGGCTTGTG GGGCTAGTAAGCAGGTGAGGGGCACAGGGCCTTGAGTTGGGTTGGGTGTG CGAAGACGGCGTTGCGATGGGTTCGGGTGTGTCTGTTGGCGTGCTTGTTT TTGGTACTCATTTGGAGGAAGGTTTCGAGCTTGTTGGCGTTCTCACCAGC GTTTACAAGGTGCTGTTCTTTCAGCTCCCCTTTTGCTGTGTTGGAGTAGG ACACATGGTCGCCCTGGCAACCAGTCACGTGGGCGCCCTGACTCGTCTTG AGTTTTCCCGTGTGGAGCACCGGCATTGGTGTGTGTACATGACCAGCGAC CAATCAAGACAAATGAGATGGATAGGCGGCAGTCGCCCGAATGCATGCTT AGTCTTCGCGGGAAAGGGTGGGAATTGCACGGTGCAACCAATAGCGCGAA AACCAGTCGCAAGATTTGTCTCGAGATCGTGCACCCACAAATAAAACCAA GCGCTCTGTCGTACAGTAGACATCGTCTTCCGTGTGCAGGTCTCCCCGGC ATCCTTGAAAAACTTTGAACGAATCTGCTTGTAACCCCTAGGGTGTTGAC AACCCTGCGGCCATCTTCTTCTGTGCAATGTTTGCGTTGAGGTCTTGTCA GGACGTACTCCTGCTCCAAACCCTCCTAAAGTCGCTTATTTCCCAATAGT CACGAACGCCACCCATCTCGCACCTTCCTTTCTGTTACAGGCATGCGCTC AAGCGGTAGGGGTTCTTTCTTTCTGGAGATGGACCGCGAAATATGGGACA CCCCGGCGATGGGCGGGGTCGTCTCGTATTGGATGGATACTGCGTACGCT CCTTTGGTTGGAGGAGGCGTTTTGTCCCCAGATAGGGTCAGTCAGCCGTC CGTGCCCAGCTCTCTGCGTGACGGGTTTTAACACTCCAGCTCTTGGTGGC GGCCTTCTTGTAGTTTGGTTGGAGTACGGTCGTGTAGATGAGGCTTCTGT GGTAGATCCGCCCTCTCCTTACGGGGCGTTTTTTTGTCTTTTTGCCTCAC GCTGATGGCCATAAATAGGCGAAATCCCTCTGTTTGTGGATAGCTGGCGG GTTTGATGACAAGCACGGAGGAGCGCTCAACGAAAGAAGTAGCCGTTCCT TAGAAGTGAATGTAGACGATTTTTTGGCGGCACGACCCTCGGCTTAGTTT AATTCTCCCATGGTGTACAGCACCGCAGGAGGTAGGTGGAGACATCCCCT CCTGTATGACCCCAGATGGTAGCCTAGCTAGTTGTAGTGAAGAGGAGGAG GCAGGCTACGAAAAAAAATTAATGGGCGAGAACAAAAAAAAACGTATGCC TCCACGTTCGCAGCATAG
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Coding sequence (CDS) from alignment at C-linearis_contig9:1698460..1702077+

>mRNA_C-linearis_contig9.16596.1 ID=mRNA_C-linearis_contig9.16596.1|Name=mRNA_C-linearis_contig9.16596.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2784bp|location=Sequence derived from alignment at C-linearis_contig9:1698460..1702077+ (Chordaria linearis ClinC8C monoicous)
ATGGAAAAGGTGAAAGATGGAAAAGGTGAAAGAGGATGCCGCCGAAGGCA
AAGGTGGGCTCAAGGACCCGGACACCCACGACAGGTTCACCGACCTGGTC
ATTCACGGACACGTGCAAGAGGTCGAGGAGATGCTGCGGGCCAGCGGCTC
CGCGGAGGGCTCCGCGGAGCTGATCGAAGGCACGGAATACGCTTTCCCGC
CGCTTATTTATGCGGTCTACAACGAAAAGGCCGAGATGGTGCGGCTCCTG
CTCGACCACGGCGCCAAGGTCGACTCGCGGACCTGCTGCACAACCGAGGG
GAACCGGATTCCTATCGGGTTCACGGCCCTCCACTCCGCGGCGTCGCAGG
GGAAGCTCGAGTTCGTGCTCATGCTGCTGGAGGCCGGGGCGTCGCCGAAC
ATCCAGGACGACGAGGGGAGCACGCCGCTGCTGTACGTTACCAAGTTCGA
GGACACGGAGCACCACGTCGCCATCAGTCGGGCCCTGCTGGAGGCCGGCG
CGGACCCGCTCCTCAGGGACGTCAGAGAGGGGACGCCCTTCCACGTCGCG
GCTGGCCGGGGCAGCATAGAAGTGGTGGACATGTTGTTGGACAAGGCGCC
GTCCGCCCTCAACCTGACCACCGCCACCGGCGCTACTGCGTTGTACCTGG
CGGCGACAGAGCCCGGGTTGGACTATATGGTGTCTCACCTGCTATCCAGG
GGGGCCACGAATGAGCCTGTGCTAGGCAATGGCAGCTGCCCGCTCGCAGG
GGCCGTGCACTACGCCCTGGAGAGCATAGTCGAGGTCATCCTGAAGGAAG
GTTGGAAGGCGGTGGGGGGGGCCATAGCCCTTCCTCGGGCAATCCACCTT
GCCTCCATCAAGGACCTCCCGCGGACGCTGCTGATGCTCCTGGACGCTGA
AGGGCCGGACAAGCGGCAGTCCTGGTCGAGGTGCGTCAACGTCGACTTCT
TCATATCCCCGCTCCATGTGGCCATCGCCTCCGACAGCGTCCGCGCCGTG
AGCGTCCTGCTGCAGGCCGGGGCGAACGAGGGAGTCCTCGTTAATAGGAT
CTTCAACCAGTACAACCACCAGAATAGGATGATCTTCATGCCCCGCACGC
CCAAGAGGGACCAGGCGAGCAAGGCGGCGGTCAGGAGGACGGTGGCACGG
GCCGCGGCCTTTCGAGCTCGGTCGTGGGCGTGGCCTGTTGCTGTGGTTGT
TGTTGGACGGGATGCTGCTGCGGTTGCTGCTCCTGTCGCATCTGCTGCTG
CTCCTGCTGAGAGTGAGATTGGTGGTGGTGGCAAGCAGCCCTTTTTCGTG
TTAGGCGCCAACAGGAGACCTATCGCGCCGTTGGGTGTGATAATCCACCG
ACCTAGGAGGAGCATGTGGCTTGTGGGGCTAGTAAGCAGAGGATGCCGCC
GAAGGCAAAGGTGGGCTCAAGGACCCGGACACCCACGACAGGTTCACCGA
CCTGGTCATTCACGGACACGTGCAAGAGGTCGAGGAGATGCTGCGGGCCA
GCGGCTCCGCGGAGGGCTCCGCGGAGCTGATCGAAGGCACGGAATACGCT
TTCCCGCCGCTTATTTATGCGGTCTACAACGAAAAGGCCGAGATGGTGCG
GCTCCTGCTCGACCACGGCGCCAAGGTCGACTCGCGGACCTGCTGCACAA
CCGAGGGGAACCGGATTCCTATCGGGTTCACGGCCCTCCACTCCGCGGCG
TCGCAGGGGAAGCTCGAGTTCGTGCTCATGCTGCTGGAGGCCGGGGCGTC
GCCGAACATCCAGGACGACGAGGGGAGCACGCCGCTGCTGTACGTTACCA
AGTTCGAGGACACGGAGCACCACGTCGCCATCAGTCGGGCCCTGCTGGAG
GCCGGCGCGGACCCGCTCCTCAGGGACGTCAGAGAGGGGACGCCCTTCCA
CGTCGCGGCTGGCCGGGGCAGCATAGAAGTGGTGGACATGTTGTTGGACA
AGGCGCCGTCCGCCCTCAACCTGACCACCGCCACCGGCGCTACTGCGTTG
TACCTGGCGGCGACAGAGCCCGGGTTGGACTATATGGTGTCTCACCTGCT
ATCCAGGGGGGCCACGAATGAGCCTGTGCTAGGCAATGGCAGCTGCCCGC
TCGCAGGGGCCGTGCACTACGCCCTGGAGAGCATAGTCGAGGTCATCCTG
AAGGAAGGTTGGAAGGCGGTGGGGGGGGCCATAGCCCTTCCTCGGGCAAT
CCACCTTGCCTCCATCAAGGACCTCCCGCGGACGCTGCTGATGCTCCTGG
ACGCTGAAGGGCCGGACAAGCGGCAGTCCTGGTCGAGGTGCGTCAACGTC
GACTTCTTCATATCCCCGCTCCATGTGGCCATCGCCTCCGACAGCGTCCG
CGCCGTGAGCGTCCTGCTGCAGGCCGGGGCGAACGAGGGAGTCCTCGTTA
ATAGGATCTTCAACCAGTACAACCACCAGAATAGGATGATCTTCATGCCC
CGCACGCCCAAGAGGGACCAGGCGAGCAAGGCGGCGGTCAGGAGGACGGT
GGCACGGGCCGCGGCCTTTCGAGCTCGGTCGTGGGCGTGGCCTGTTGCTG
TGGTTGTTGTTGGACGGGATGCTGCTGCGGTTGCTGCTCCTGTCGCATCT
GCTGCTGCTCCTGCTGAGAGTGAGATTGGTGGTGGTGGCAAGCAGCCCTT
TTTCGTGTTAGGCGCCAACAGGAGACCTATCGCGCCGTTGGGTGTGATAA
TCCACCGACCTAGGAGGAGCATGTGGCTTGTGGGGCTAGTAAGCAGGCAT
GCGCTCAAGCGGTAGGCATGCGCTCAAGCGGTAG
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